Contig 007681:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS122C03Sequence579007681 (2)dbj|BAO49698.1|1e-70nuclear pore complex protein Nup214 [Nicotiana benthamiana]
JMFS125C07Sequence563007681 (2)ref|XP_009776094.1|6e-60PREDICTED: uncharacterized protein LOC104225914 isoform X1 [Nicotiana sylvestri

Alignment

This contig is upended


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JMFS122C03+                                                               TAACATTA
                      ____________________________________________________________
consensus                                                                 TAACATTA
 
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JMFS122C03+           CGCCTGTCTGTAGAAGAATCTATGTTCAAATCACTCATAAGTTTGAGAGGCTTCCAGAGA
                      ____________________________________________________________
consensus             CGCCTGTCTGTAGAAGAATCTATGTTCAAATCACTCATAAGTTTGAGAGGCTTCCAGAGA
 
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JMFS122C03+           GCTGCTCTGCTACTGCTAGTTGTGCATTCACTGTGTCACGTAAGCTGTGCAAGGACTGGA
                      ____________________________________________________________
consensus             GCTGCTCTGCTACTGCTAGTTGTGCATTCACTGTGTCACGTAAGCTGTGCAAGGACTGGA
 
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JMFS122C03+           CATTCCTTCCTTGCCCATGCTTGCTTTGGGAAGCTCTACGATTCATTTGCATCCCATCAC
JMFS125C07+                                                ACGATTCATNTGCATCCCATCAC
                      ____________________________________________________________
consensus             CATTCCTTCCTTGCCCATGCTTGCTTTGGGAAGCTCTACGATTCATTTGCATCCCATCAC
 
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JMFS122C03+           TTCCACCAAAAGTATTTAGTTCAAGAATGTTGAAGTGCCTTTCCAACTCAATGAGTTGAT
JMFS125C07+           TTCCACCAAAAGTATTTAGTTCAAGAATGTTGAAGTGCCTTTCCAACTCAATGAGTTGAT
                      ____________________________________________________________
consensus             TTCCACCAAAAGTATTTAGTTCAAGAATGTTGAAGTGCCTTTCCAACTCAATGAGTTGAT
 
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JMFS122C03+           TGGTTAAGACCTTGTTCATATCTCTTATATGTTCCTGCTTCAAGTCAAGTTCAGAACTTA
JMFS125C07+           TGGTTAAGACCTTGTTCATATCTCTTATATGTTCCTGCTTCAAGTCAAGTTCAGAACTTA
                      ____________________________________________________________
consensus             TGGTTAAGACCTTGTTCATATCTCTTATATGTTCCTGCTTCAAGTCAAGTTCAGAACTTA
 
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JMFS122C03+           ATTTCTGGCGACTCCAGAGATCCAAATATCGGCTATCAGTGGCCTGCTTGAGAATGCCCT
JMFS125C07+           ATTTCTGGCGACTCCAGAGATCCAAATATCGGCTATCAGTGGCCTGCTTGAGAATGCCCT
                      ____________________________________________________________
consensus             ATTTCTGGCGACTCCAGAGATCCAAATATCGGCTATCAGTGGCCTGCTTGAGAATGCCCT
 
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JMFS122C03+           CCATGTATACTTTCTTTGCCAAAACTTTTACTGTCTTATCAAGGAGGAGCTGGATCTCTC
JMFS125C07+           CCATGTATACTTTCTTTGCCAAAACTTTTACTGTCTTATCAAGGAGGAGCTGGATCTCTC
                      ____________________________________________________________
consensus             CCATGTATACTTTCTTTGCCAAAACTTTTACTGTCTTATCAAGGAGGAGCTGGATCTCTC
 
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JMFS122C03+           CTTGCCGCTCATCCATTATTCCCCTCCACAGCCTGCACCTATCAGAAAGAGCCTGTATGC
JMFS125C07+           CTTGCCGCTCATCCATTATTCCCCTCCACAGCCTGCACCTATCAGAAAGAGCCTGTATGC
                      ____________________________________________________________
consensus             CTTGCCGCTCATCCATTATTCCCCTCCACAGCCTGCACCTATCAGAAAGAGCCTGTATGC
 
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JMFS122C03+           CTTTTTCTAAATTTATAACTGAATTCTTCTGGCTAGCAATGGATGCATTCATAAAACCCC
JMFS125C07+           CTTTTTCTAAATTTATAACTGAATTCTTCTGGCTAGCAATGGATGCATTCATAAAACCCC
                      ____________________________________________________________
consensus             CTTTTTCTAAATTTATAACTGAATTCTTCTGGCTAGCAATGGATGCATTCATAAAACCCC
 
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JMFS122C03+           CTTCACCTTCTATCCCTTCTAGAAGGTCATC                             
JMFS125C07+           CTTCACCTTCTATCCCTTCTAGAAGGTCATCCAGTTTTCTGGCCATTTCTTCAACACTGC
                      ____________________________________________________________
consensus             CTTCACCTTCTATCCCTTCTAGAAGGTCATCCAGTTTTCTGGCCATTTCTTCAACACTGC
 
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JMFS125C07+           GAAACTGCTTGGACGGTATTCTTTCAGAAGTATCTCTTGCAGGTTGAAGCTTTGAAGGCT
                      ____________________________________________________________
consensus             GAAACTGCTTGGACGGTATTCTTTCAGAAGTATCTCTTGCAGGTTGAAGCTTTGAAGGCT
 
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JMFS125C07+           TTTGCAATGAAATGTTTTGCTGCAACGAAGATGATGACTTAATGCTCTCAGCCCAAGGCA
                      ____________________________________________________________
consensus             TTTGCAATGAAATGTTTTGCTGCAACGAAGATGATGACTTAATGCTCTCAGCCCAAGGCA