Contig 007678:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS063G08Sequence305007678 (4)
JMFS119C11Sequence614007678 (4)ref|XP_006342868.1|217PREDICTED: uncharacterized protein LOC102578846 [Solanum tuberosum]
JMFS126B11Sequence622007678 (4)ref|XP_006342868.1|220PREDICTED: uncharacterized protein LOC102578846 [Solanum tuberosum]
JMSF016K21Sequence216007678 (4)795015001emb|CBI25283.3|4e-116unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMFS126B11+                                           TCAGGATCAATTTCAGATAAAGAATCAA
JMFS119C11+                                                         AGATAAAGAATCAA
                      ____________________________________________________________
consensus                                             TCAGGATCAATTTCAGATAAAGAATCAA
 
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JMFS126B11+           CATGAACTCCATCAGCTAAATTATGGATTAAAGTAGCCTGAGTAGATAGCAGCTTTTTCA
JMFS119C11+           CATGAACTCCATCAGCTAAATTATGGATTAAAGTAGCCTGAGTAGATAGCAGCTTTTTCA
                      ____________________________________________________________
consensus             CATGAACTCCATCAGCTAAATTATGGATTAAAGTAGCCTGAGTAGATAGCAGCTTTTTCA
 
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JMFS126B11+           TTGATGAAAGCTCACCCTCGAGATCTGAAATCTCTTTTGATGTGCGAATGAAAGCAGTAT
JMFS119C11+           TTGATGAAAGCTCACCCTCGAGATCTGAAATCTCTTTTGATGTGCGAATGAAAGCAGTAT
                      ____________________________________________________________
consensus             TTGATGAAAGCTCACCCTCGAGATCTGAAATCTCTTTTGATGTGCGAATGAAAGCAGTAT
 
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JMFS126B11+           AGTTAGCATAGACACTTCTGCGCATCTCCTCAGCAGAAGCCTTTTTTAGATCCAACAGAG
JMFS119C11+           AGTTAGCATAGACACTTCTGCGCATCTCCTCAGCAGAAGCCTTTTTTAGATCCAACAGAG
                      ____________________________________________________________
consensus             AGTTAGCATAGACACTTCTGCGCATCTCCTCAGCAGAAGCCTTTTTTAGATCCAACAGAG
 
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JMFS126B11+           AGGAGCATAACTGCCTAATCTCCTTTTCATTCAAAGAATGACACTTGGACTGTACATAAC
JMFS119C11+           AGGAGCATAACTGCCTAATCTCCTTTTCATTCAAAGAATGACACTTGGACTGTACATAAC
                      ____________________________________________________________
consensus             AGGAGCATAACTGCCTAATCTCCTTTTCATTCAAAGAATGACACTTGGACTGTACATAAC
 
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JMFS126B11+           CATCGGCGTCGAAGCTATCGGCTTTAAAGACGTTGAGTTTCTCCTCGAGCTTCGGACCGG
JMFS063G08+                                                            CTTCGGACCGG
JMFS119C11+           CATCGGCGTCGAAGCTATCGGCTTTAAAGACGTTGAGTTTCTCCTCGAGCTTCGGACCGG
                      ____________________________________________________________
consensus             CATCGGCGTCGAAGCTATCGGCTTTAAAGACGTTGAGTTTCTCCTCGAGCTTCGGACCGG
 
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JMSF016K21+                                  GGCGTCCCGGCGCCGTAATTTCTTGACCTAGACGACT
JMFS126B11+           TGTCTCTGTTGCCCCCTTTTGCTGGCGTCCCGGCGCCGTAATTTCTTGACCTAGACGACT
JMFS063G08+           TGTCTCTGTTGCCCCCTTTTGCTGGCGTCCCGGCGCCGTAATTTCTTGACCTAGACGACT
JMFS119C11+           TGTCTCTGTTGCCCCCTTTTGCTGGCGTCCCGGCGCCGTAATTTCTTGACCTAGACGACT
                      ____________________________________________________________
consensus             TGTCTCTGTTGCCCCCTTTTGCTGGCGTCCCGGCGCCGTAATTTCTTGACCTAGACGACT
 
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JMSF016K21+           TCAGCGTTGCCATAATCACCTTGTTGACTCTGGTCGCTCAACAGCTAATCCTCCAAAAAA
JMFS126B11+           TCAGCGTTGCCATAATCACCTTGTTGACTCTGGTCGCTCAACAGCTAATCCTCCAAAAAA
JMFS063G08+           TCAGCGTTGCCATAATCACCTTGTTGACTCTGGTCGCTCAACAGCTAATCCTCCAAAAAA
JMFS119C11+           TCAGCGTTGCCATAATCACCTTGTTGACTCTGGTCGCTCAACAGCTAATCCTCCAAAAAA
                      ____________________________________________________________
consensus             TCAGCGTTGCCATAATCACCTTGTTGACTCTGGTCGCTCAACAGCTAATCCTCCAAAAAA
 
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JMSF016K21+           AAGCTCAGCATAAATATCTGATCAGCACGCAGTTAGATCTACGCTTGCGAGCTGAAAGAC
JMFS126B11+           AAGCTCAGCATAAATATCTGATCAGCACGCAGTTAGATCTACGCTTGCGAGCTGAAAGAC
JMFS063G08+           AAGCTCAGCATAAATATCTGATCAGCACGCAGTTAGATCTACGCTTGCGAGCTGAAAGAC
JMFS119C11+           AAGCTCAGCATAAATATCTGATCAGCACGCAGTTAGATCTACGCTTGCGAGCTGAAAGAC
                      ____________________________________________________________
consensus             AAGCTCAGCATAAATATCTGATCAGCACGCAGTTAGATCTACGCTTGCGAGCTGAAAGAC
 
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JMSF016K21+           GGCGAGAGAAGAGGCGTTGCCATGGATGAGAATTGAGAAAACGAATTGTTGAAGAAG   
JMFS126B11+           GGCGAGAGAAGAGGCGTTGCCATGGATGAGAATTGAGAAAACGAATTGTTGAAGAAGGAA
JMFS063G08+           GGCGAGAGAAGAGGCGTTGCCATGGATGAGAATTGAGAAAACGAATTGTTGAAGAAGGAA
JMFS119C11+           GGCGAGAGAAGAGGCGTTGCCATGGATGAGAATTGAGAAAACGAATTGTTGAAGAAGGAA
                      ____________________________________________________________
consensus             GGCGAGAGAAGAGGCGTTGCCATGGATGAGAATTGAGAAAACGAATTGTTGAAGAAGGAA
 
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JMFS126B11+           GGAAGAAAAAAAAAAACCCGAAGAGAACTAGTTTTTGTTGCTTTTTGTTGGCGG      
JMFS063G08+           GGAAG-AAAAAAAAAACCCGAAGAGAACTAGTTTTTGTTGCTTTTTGTTGGCGG      
JMFS119C11+           GGAAGAAAAAAAAAAACCCGAAGAGAACTAGTTTTTGTTGCTTTTTGTTGGCGGATTATA
                      ____________________________________________________________
consensus             GGAAGAAAAAAAAAAACCCGAAGAGAACTAGTTTTTGTTGCTTTTTGTTGGCGGATTATA