Contig 007675:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046O16Sequence537006229 (4)ref|XP_008342079.1|2e-70PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Malus domestic459007675 (2)ref|XP_009784294.1|2e-49PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Nicotiana sylv
JMFS116A11Sequence532007675 (2)ref|XP_009784294.1|1e-82PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Nicotiana sylv

Alignment

This contig is upended


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rJMFF046O16-                                                            GATGTAAAGG
                      ____________________________________________________________
consensus                                                               GATGTAAAGG
 
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rJMFF046O16-          TGAAAATTTGCACACTTACAATGGAAATTAAGACTTTGTCCAAAACATGCATGGCCAGAA
                      ____________________________________________________________
consensus             TGAAAATTTGCACACTTACAATGGAAATTAAGACTTTGTCCAAAACATGCATGGCCAGAA
 
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rJMFF046O16-          AGTTGTATGTATCACCCATATTTGAACACATGTTAATCCTAAAATCCTTACACGACGACT
JMFS116A11+                   GTATCACCCATATTTGAACACATGTTAATCCTAAAATCCTTACACGACGACT
                      ____________________________________________________________
consensus             AGTTGTATGTATCACCCATATTTGAACACATGTTAATCCTAAAATCCTTACACGACGACT
 
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rJMFF046O16-          AATTAAAGAAAGAAATAATGGAAAATAGGGTTAAGCGGCGGCGTTTGATATAATTACGCA
JMFS116A11+           AATTAAAGAAAGAAATAATGGAAAATAGGGTTAAGCGGCGGCGTTTGATATAATTACGCA
                      ____________________________________________________________
consensus             AATTAAAGAAAGAAATAATGGAAAATAGGGTTAAGCGGCGGCGTTTGATATAATTACGCA
 
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rJMFF046O16-          TATGCAGTGCTGTGAAACCTTTTAATGGTGCAGCGGTTAAGGATTCTTAGCAGCACCTGG
JMFS116A11+           TATGCAGTGCTGTGAAACCTTTTAATGGTGCAGCGGTTAAGGATTCTTAGCAGCACCTGG
                      ____________________________________________________________
consensus             TATGCAGTGCTGTGAAACCTTTTAATGGTGCAGCGGTTAAGGATTCTTAGCAGCACCTGG
 
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rJMFF046O16-          TTTGTAGTACACCTGGGTGTCTTGAACTGGCTGAGCGCCGCCCCATTGCCGATGAAATGC
JMFS116A11+           TTTGTAGTACACCTGGGTGTCTTGAACTGGCTGAGCGCCGCCCCATTGCCGATGAAATGC
                      ____________________________________________________________
consensus             TTTGTAGTACACCTGGGTGTCTTGAACTGGCTGAGCGCCGCCCCATTGCCGATGAAATGC
 
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rJMFF046O16-          TCCAGAATCTTCCTGAAAGTTCCTCTCTCCACAATCCTTAGCTCCAGGGGTCCGATGGAG
JMFS116A11+           TCCAGAATCTTCCTGAAAGTTCCTCTCTCCACAATCCTTAGCTCCAGGGGTCCGATGGAG
                      ____________________________________________________________
consensus             TCCAGAATCTTCCTGAAAGTTCCTCTCTCCACAATCCTTAGCTCCAGGGGTCCGATGGAG
 
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rJMFF046O16-          TTTGTTCTCCGGGACACCACGTACCCATGGTCCACGAAAGAAGCGTCCATTTCTCTGCAA
JMFS116A11+           TTTGTTCTCCGGGACACCACGTACCCATGGTCCACGAAAGAAGCGTCCATTTCTCTGCAA
                      ____________________________________________________________
consensus             TTTGTTCTCCGGGACACCACGTACCCATGGTCCACGAAAGAAGCGTCCATTTCTCTGCAA
 
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rJMFF046O16-          CATTCTCCCAGAACCCTCTCCTCAACCTC                               
JMFS116A11+           CATTCTCCCAGAACCCTCTCCTCAACCTCCCCTATGATCTCCCAGTATATAACGTAGTGC
                      ____________________________________________________________
consensus             CATTCTCCCAGAACCCTCTCCTCAACCTCCCCTATGATCTCCCAGTATATAACGTAGTGC
 
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JMFS116A11+           CCAGGTTGTTTTGCCACGTCTGCGTGGCTCGTGAAGTCCACTAGATGAGCCCTCGTCTTG
                      ____________________________________________________________
consensus             CCAGGTTGTTTTGCCACGTCTGCGTGGCTCGTGAAGTCCACTAGATGAGCCCTCGTCTTG
 
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JMFS116A11+           CTTAGAATCTGTAAACCCCTCTCCACTACTAGCTGGAGATCTTTCTCTGTGTTCTTGTCG
                      ____________________________________________________________
consensus             CTTAGAATCTGTAAACCCCTCTCCACTACTAGCTGGAGATCTTTCTCTGTGTTCTTGTCG