| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF016G21 | Sequence | 540 | 003501 (4) | ref|XP_009773987.1| | 2e-57 | PREDICTED: triose phosphate/phosphate translocator, non-green plastid, chloropl | 769 | 007673 (5) | gb|KDP31087.1| | 4e-89 | hypothetical protein JCGZ_11463 [Jatropha curcas] |
| JMFN017A15 | Sequence | 591 | 007673 (5) | gb|KDP31087.1| | 3e-61 | hypothetical protein JCGZ_11463 [Jatropha curcas] | |||||
| JMFS114H10 | Sequence | 561 | 007673 (5) | ref|XP_011101316.1| | 5e-24 | PREDICTED: triose phosphate/phosphate translocator, non-green plastid, chloropl | |||||
| JMSF001E18 | Sequence | 434 | 003501 (4) | ref|XP_009595321.1| | 2e-11 | PREDICTED: phosphoenolpyruvate/phosphate translocator 1, chloroplastic-like [Ni | 731 | 007673 (5) | gb|KDP31087.1| | 2e-84 | hypothetical protein JCGZ_11463 [Jatropha curcas] |
| JMSF033J24 | Sequence | 701 | 003501 (4) | ref|XP_009773987.1| | 3e-70 | PREDICTED: triose phosphate/phosphate translocator, non-green plastid, chloropl | 731 | 007673 (5) | gb|KDP31087.1| | 2e-78 | hypothetical protein JCGZ_11463 [Jatropha curcas] |
This contig is upended
. : . : . : . : . : . :
JMFN017A15- TTACTCTGTTCATGGAAGGAGTCAAGTTCACACCTGCATACCTCCAATCTGCTGG
____________________________________________________________
consensus TTACTCTGTTCATGGAAGGAGTCAAGTTCACACCTGCATACCTCCAATCTGCTGG
. : . : . : . : . : . :
JMFN017A15- GTTGAATGTCAACCAGATTTACACTAGGTCTCTCATTGCGGCTCTCTGCTTCCATGCTTA
JMFS114H10- CCACTCGCT
____________________________________________________________
consensus GTTGAATGTCAACCAGATTTACACTAGGTCTCTCATTGCGGCTCTCTGCTTCCATTCTTT
. : . : . : . : . : . :
JMFN017A15- TCAACAGGTTTCCTACATGATATTGCAGAGAGTGTCTCCTGTCACCCATTCTGTGGGTAA
rJMSF001E18+ GTTTCCTACATGATATTGCAGAGAGTGTCTCCTGTCACCCATTCTGTGGGTAA
rJMFF016G21+ GTTTCCTACATGATATTGCAGAGAGTGTCTCCTGTCACCCATTCTGTGGGTAA
rJMSF033J24+ GTTTCCTACATGATATTGCAGAGAGTGTCTCCTGTCACCCATTCTGTGGGTAA
JMFS114H10- TCACACAGTTACCCACAGAATGGGTGACAGGAGACACTCTCTGCAATATCATGTAGGAAA
____________________________________________________________
consensus TCACCCGGTTTCCTACATGATATTGCAGAGAGTGTCTCCTGTCACCCATTCTGTGGGTAA
. : . : . : . : . : . :
JMFN017A15- CTGTGTGAAGCGAGTGGTGGTCATTGTGACATCAGTTCTCTTCTTCCGTACACCTGTAAC
rJMSF001E18+ CTGTGTGAAGCGAGTGGTGGTCATTGTGACATCAGTTCTCTTCTTCCGTACACCTGTAAC
rJMFF016G21+ CTGTGTGAAGCGAGTGGTGGTCATTGTGACATCAGTTCTCTTCTTCCGTACACCTGTAAC
rJMSF033J24+ CTGTGTGAAGCGAGTGGTGGTCATTGTGACATCAGTTCTCTTCTTCCGTACACCTGTAAC
JMFS114H10- CTGTGTGAAGCGAGTGGTGGTCATTGTGACATCAGTTCTCTTCTTCCGTACACCTGTAAC
____________________________________________________________
consensus CTGTGTGAAGCGAGTGGTGGTCATTGTGACATCAGTTCTCTTCTTCCGTACACCTGTAAC
. : . : . : . : . : . :
JMFN017A15- ATCAATCAATGCTATTGGGACCGGGGTGGCCCTTGCGGGAGTTTTCCTGTATTCAAGGGT
rJMSF001E18+ ATCAATCAATGCTATTGGGACCGGGGTGGCCCTTGCGGGAGTTTTCCTGTATTCAAGGGT
rJMFF016G21+ ATCAATCAATGCTATTGGGACCGGGGTGGCCCTTGCGGGAGTTTTCCTGTATTCAAGGGT
rJMSF033J24+ ATCAATCAATGCTATTGGGACCGGGGTGGCCCTTGCGGGAGTTTTCCTGTATTCAAGGGT
JMFS114H10- ATCAATCAATGCTATTGGGACCGGGGTGGCCCTTGCGGGAGTTTTCCTGTATTCAAGGGT
____________________________________________________________
consensus ATCAATCAATGCTATTGGGACCGGGGTGGCCCTTGCGGGAGTTTTCCTGTATTCAAGGGT
. : . : . : . : . : . :
JMFN017A15- TAAACGCATCAAGCCTAAGCCCAAAACAGCTTGAACTTTAGCAGGATGAAGCAACACCGG
rJMSF001E18+ TAAACGCATCAAGCCTAAGCCCAAAACAGCTTGAACTTTAGCAGGATGAAGCAACACCGG
rJMFF016G21+ TAAACGCATCAAGCCTAAGCCCAAAACAGCTTGAACTTTAGCAGGATGAAGCAACACCGG
rJMSF033J24+ TAAACGCATCAAGCCTAAGCCCAAAACAGCTTGAACTTTAGCAGGATGAAGCAACACCGG
JMFS114H10- TAAACGCATCAAGCCTAAGCCCAAAACAGCTTGAACTTTAGCAGGATGAAGCAACACCGG
____________________________________________________________
consensus TAAACGCATCAAGCCTAAGCCCAAAACAGCTTGAACTTTAGCAGGATGAAGCAACACCGG
. : . : . : . : . : . :
JMFN017A15- TGTCCTGGCTGCAATTTTCCGTTGTGTTGTCTATGTCGTATTCTTTTGGCAGATAGTGTG
rJMSF001E18+ TGTCCTGGCTGCAATTTTCCGTTGTGTTGTCTATGTCGTATTCTTTTGGCAGATAGTGTG
rJMFF016G21+ TGTCCTGGCTGCAATTTTCCGTTGTGTTGTCTATGTCGTATTCTTTTGGCAGATAGTGTG
rJMSF033J24+ TGTCCTGGCTGCAATTTTCCGTTGTGTTGTCTATGTCGTATTCTTTTGGCAGATAGTGTG
JMFS114H10- TGTCCTGGCTGCAATTTTCCGTTGTGTTGTCTATGTCGTATTCTTTTGGCAGATAGTGTG
____________________________________________________________
consensus TGTCCTGGCTGCAATTTTCCGTTGTGTTGTCTATGTCGTATTCTTTTGGCAGATAGTGTG
. : . : . : . : . : . :
JMFN017A15- TGAAAACTTGATAATCTCTACACGTTGAACCTGTTCTGCCATAGCTTTTGTAGTTCCTTT
rJMSF001E18+ TGAAAACTTGATAATCTCTACACGTTGAACCTGTTCTGCCATAGCTTTTGTAGTTCCTTT
rJMFF016G21+ TGAAAACTTGATAATCTCTACACGTTGAACCTGTTCTGCCATAGCTTTTGTAGTTCCTTT
rJMSF033J24+ TGAAAACTTGATAATCTCTACACGTTGAACCTGTTCTGCCATAGCTTTTGTAGTTCCTTT
JMFS114H10- TGAAAACTTGATAATCTCTACACGTTGAACCTGTTCTGCCATAGCTTTTGTAGTTCCTTT
____________________________________________________________
consensus TGAAAACTTGATAATCTCTACACGTTGAACCTGTTCTGCCATAGCTTTTGTAGTTCCTTT
. : . : . : . : . : . :
JMFN017A15- AAGAGTTAGTGGGTGTTCCATATAATTCTTGTAGCTGTAGTGCCTCCTCCACGACTTCGG
rJMSF001E18+ AAGAGTTAGTGGGTGTTCCATATAATTCTTGTAGCTGTAGTGCCTCCTCCACGACTTCGG
rJMFF016G21+ AAGAGTTAGTGGGTGTTCCATATAATTCTTGTAGCTGTAGTGCCTCCTCCACGACTTCGG
rJMSF033J24+ AAGAGTTAGTGGGTGTTCCATATAATTCTTGTAGCTGTAGTGCCTCCTCCACGACTTCGG
JMFS114H10- AAGAGTTAGTGGGTGTTCCATATAATTCTTGTAGCTGTAGTGCCTCCTCCACGACTTCGG
____________________________________________________________
consensus AAGAGTTAGTGGGTGTTCCATATAATTCTTGTAGCTGTAGTGCCTCCTCCACGACTTCGG
. : . : . : . : . : . :
JMFN017A15- AGGAAAAAAAAGCCTGTTAAGCTATTAGGTAATGCTTATTTGAGACTATGGGAACT
rJMSF001E18+ AGGAAAAAAAAGCCTGTTAAGCTATTAGGTAATGCTTATTTGAGACTATGGGAACTGTAG
rJMFF016G21+ AGGAAAAAAAAGCCTGTTAAGCTATTAGGTAATGCTTATTTGAGACTATGGGAACTGTAG
rJMSF033J24+ AGGAAAAAAAAGCCTGTTAAGCTATTAGGTAATGCTTATTTGAGACTATGGGAACTGTAG
JMFS114H10- AGGAAAAAAAAGCCTGTTAAGCTATTAGGTAATGCTTATTTGAGACTATGGGAACTGTAG
____________________________________________________________
consensus AGGAAAAAAAAGCCTGTTAAGCTATTAGGTAATGCTTATTTGAGACTATGGGAACTGTAG
. : . : . : . : . : . :
rJMSF001E18+ AATTTGCTTAGAGATTCTGTTTTCCAAATAT
rJMFF016G21+ AATTTGCTTAGAGATTCTGTTTTCCAAATATTTTCC
rJMSF033J24+ AATTTGCTTAGAGATTCTGTTTTCCAAATATTTTCC
JMFS114H10- AATTTGCTTAGAGATTCTGTTTTCCAAATATTTTCCTGTATTGCGTCGAATATTTTCTTT
____________________________________________________________
consensus AATTTGCTTAGAGATTCTGTTTTCCAAATATTTTCCTGTATTGCGTCGAATATTTTCTTT