| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014B23 | Sequence | 729 | 007670 (6) | ref|XP_006343321.1| | 143 | PREDICTED: uncharacterized protein LOC102600442 [Solanum tuberosum] | |||||
| JMFS111D09 | Sequence | 626 | 007670 (6) | ref|XP_006343321.1| | 105 | PREDICTED: uncharacterized protein LOC102600442 [Solanum tuberosum] | |||||
| JMSF007D07 | Sequence | 275 | 009202 (4) | 750 | 007670 (6) | ref|XP_006343321.1| | 213 | PREDICTED: uncharacterized protein LOC102600442 [Solanum tuberosum] | |||
| JMSF017D23 | Sequence | 227 | 009202 (4) | 744 | 007670 (6) | ref|XP_006343321.1| | 172 | PREDICTED: uncharacterized protein LOC102600442 [Solanum tuberosum] | |||
| JMSF019G20 | Sequence | 260 | 009202 (4) | 760 | 007670 (6) | ref|XP_006343321.1| | 188 | PREDICTED: uncharacterized protein LOC102600442 [Solanum tuberosum] | |||
| JMSF045E13 | Sequence | 793 | 009202 (4) | ref|XP_009589981.1| | 53.1 | PREDICTED: uncharacterized protein LOC104087273 [Nicotiana tomentosiformis] | 816 | 007670 (6) | ref|XP_006343321.1| | 213 | PREDICTED: uncharacterized protein LOC102600442 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF007D07+ TATCTGTCGATGGAGATTCACAGGGTGTTGAGCGACTCCCAGGGGCAC
rJMSF045E13+ ATCTGTCGATGGAGATTCACAGGGTGTTGAGCGACTCCAAGGGGCAC
____________________________________________________________
consensus TATCTGTCGATGGAGATTCACAGGGTGTTGAGCGACTCCCAGGGGCAC
. : . : . : . : . : . :
rJMSF007D07+ TGTCAGCTTATATGTGGCCTGGAATGGTACTTAAGTCTGGTGATAAAATAAATGAACCTT
rJMSF017D23+ CTGGAATGGTACTTAAGTCTGGTGATAAAATAAATGAACCTT
rJMSF019G20+ TCAGCTTATATGTGGCCTGGAATGGTACTTAAGTCTGGTGATAAAATAAATGAACCTT
rJMSF045E13+ TGTCAGCTTATATGTGGCCTGGAATGGTACTTAAGTCTGGTGATAAAATAAATGAACCTT
____________________________________________________________
consensus TGTCAGCTTATATGTGGCCTGGAATGGTACTTAAGTCTGGTGATAAAATAAATGAACCTT
. : . : . : . : . : . :
rJMSF007D07+ CATTGCCTCAAGAGCAAGATGTGTCAGATGAAGAATCCGAATACGAACTTGAATATGAAA
rJMSF017D23+ CATTGCCTCAAGAGCAAGATGTGTCAGATGAAGAATCCGAATACGAACTNGAATATGAAA
rJMSF019G20+ CATTGCCTCAAGAGCAAGATGTGTCAGATGAAGAATCCGAATACGAACTTGAATATGAAA
rJMSF045E13+ CATTGCCTCAAGAGCAAGATGTGTCAGATGAAGAATCCGAATACGAACTTGAATATGAAA
rJMFF014B23+ CTCAAGAGCAAGATGTGTCAGATGAAGAATCCGAATACGANCTTGAATATGAAA
____________________________________________________________
consensus CATTGCCTCAAGAGCAAGATGTGTCAGATGAAGAATCCGAATACGAACTTGAATATGAAA
. : . : . : . : . : . :
rJMSF007D07+ TCCTATCTGCTGGTTCAGCAGAGCCCTGGGATGATGCAGATGGAGGCTGGATATCTGCAG
rJMSF017D23+ TCCTATCTGCTGGTTCAGCAGAGCCCTGGGATGATGCAGATGGAGGCTGGATATCTGCAG
rJMSF019G20+ TCCTATCTGCTGGTTCAGCAGAGCCCTGGGATGATGCAGATGGAGGCTGGATATCTGCAG
rJMSF045E13+ TCCTATCTGCTGGTTCAGCAGAGCCCTGGGATGATGCAGATGGAGGCTGGATATCTGCAG
rJMFF014B23+ TCCTATCTGCTGGTTCAGCAGAGCCNTGGGATGATGCAGATGGAGGCTGGATATCTGCAG
____________________________________________________________
consensus TCCTATCTGCTGGTTCAGCAGAGCCCTGGGATGATGCAGATGGAGGCTGGATATCTGCAG
. : . : . : . : . : . :
rJMSF007D07+ ATGGTCCTGTTACAACAACAGGGACAGCAGAATCAAGCAAACGGAAAGAGAATGGTTCTG
rJMSF017D23+ ATGGTCCTGTTACAACAACAGGGACAGCAGAATCAAGCAAACGGAAAGAGAATGGTTCTG
rJMSF019G20+ ATGGTCCTGTTACAACAACAGGGACAGCAGAATCAAGCAAACGGAAAGAGAATGGTTCTG
rJMSF045E13+ ATGGTCCTGTTACAACAACAGGGACAGCAGAATCAAGCAAACGGAAAGAGAATGGTTCTG
rJMFF014B23+ ATGGTCCTGTTACAACAACAGGGACAGCAGAATCAAGCAAACGGAAAGAGAATGGTTCTG
JMFS111D09+ CAAGCAAACGGAAAGAGAATGG-TCTG
____________________________________________________________
consensus ATGGTCCTGTTACAACAACAGGGACAGCAGAATCAAGCAAACGGAAAGAGAATGGTTCTG
. : . : . : . : . : . :
rJMSF007D07+ AAGGAGAGGTGGGGCCTTCAACATTGGAATCTCAGCTGCCGGGAGTGATTGAAAAGGAAG
rJMSF017D23+ AAGGAGAGGTGGGGCCTTCAACATTGGAATCTCAGCTGCCGGGAGTGATTGAAAAGGAAG
rJMSF019G20+ AAGGAGAGGTGGGGCCTTCAACATTGGAATCTCAGCTGCCGGGAGTGATTGAAAAGGAAG
rJMSF045E13+ AAGGAGAGGTGGGGCCTTCAACATTGGAATCTCAGCTGCCGGGAGTGATTGAAAAGGAAG
rJMFF014B23+ AAGGAGAGGTGGGGCCTTCAACATTGGAATCTCAGCTGCCGGGAGTGATTGAAAAGGAAG
JMFS111D09+ AAGGAGAGGTGGGGCCTTCAACATTGGAATCTCAGCTGCCGGGAGTGATTGAAAAGGAAG
____________________________________________________________
consensus AAGGAGAGGTGGGGCCTTCAACATTGGAATCTCAGCTGCCGGGAGTGATTGAAAAGGAAG
. : . : . : . : . : . :
rJMSF007D07+ AAATACCAGGAAAAGATGAAGCTGACAGAGTATCCGAGGCTGATAAGGGCACAACATACA
rJMSF017D23+ AAATACCAGGAAAAGATGAAGCTGACAGAGTATCCGAGGCTGATAAGGGCACAACATACA
rJMSF019G20+ AAATACCAGGAAAAGATGAAGCTGACAGAGTATCCGAGGCTGATAAGGGCACAACATACA
rJMSF045E13+ AAATACCAGGAAAAGATGAAGCTGACAGAGTATCCGAGGCTGATAAGGGCACAACATACA
rJMFF014B23+ AAATACCAGGAAAAGATGAAGCTGACAGAGTATCCGAGGCTGATAAGGGCACAACATACA
JMFS111D09+ AAATACCAGGAAAAGATGAAGCTGACAGAGTATCCGAGGCTGATAAGGGCACAACATACA
____________________________________________________________
consensus AAATACCAGGAAAAGATGAAGCTGACAGAGTATCCGAGGCTGATAAGGGCACAACATACA
. : . : . : . : . : . :
rJMSF007D07+ ATTTTGAGGATTTGGAGCACTTAATGGCTGAGATTGGAAATGTGCGTGATAGCTTAAGAT
rJMSF017D23+ ATTTTGAGGATTTGGAGCACTTAATGGCTGAGATTGGAAATGTGCGTGATAGCTTAAGAT
rJMSF019G20+ ATTTTGAGGATTTGGAGCACTTAATGGCTGAGATTGGAAATGTGCGTGATAGCTTAAGAT
rJMSF045E13+ ATTTTGAGGATTTGGAGCACTTAATGGCTGAGATTGGAAATGTGCGTGATAGCTTAAGAT
rJMFF014B23+ ATTTTGAGGATTTGGAGCACTTAATGGCTGAGATTGGAAATGTGCGTGATAGCTTAAGAT
JMFS111D09+ ATTTTGAGGATTTGGAGCACTTAATGGCTGAGATTGGAAATGTGCGTGATAGCTTAAGAT
____________________________________________________________
consensus ATTTTGAGGATTTGGAGCACTTAATGGCTGAGATTGGAAATGTGCGTGATAGCTTAAGAT
. : . : . : . : . : . :
rJMSF007D07+ TGATGCCAGATTTTCAAAGGAGGGAAATGGCAGCCAATCTGGCCATGAAAATGGCAGCCA
rJMSF017D23+ TGATGCCAGATTTTCAAAGGAGGGAAATGGCAGCCAATCTGGCCATGAAAATGGCAGCCA
rJMSF019G20+ TGATGCCAGATTTTCAAAGGAGGGAAATGGCAGCCAATCTGGCCATGAAAATGGCAGCCA
rJMSF045E13+ TGATGCCAGATTTTCAAAGGAGGGAAATGGCAGCCAATCTGGCCATGAAAATGGCAGCCA
rJMFF014B23+ TGATGCCAGATTTTCAAAGGAGGGAAATGGCAGCCAATCTGGCCATGAAAATGGCAGCCA
JMFS111D09+ TGATGCCAGATTTTCAAAGGAGGGAAATGGCAGCCAATCTGGCCATGAAAATGGCAGCCA
____________________________________________________________
consensus TGATGCCAGATTTTCAAAGGAGGGAAATGGCAGCCAATCTGGCCATGAAAATGGCAGCCA
. : . : . : . : . : . :
rJMSF007D07+ TGTTTGGTGATAGCAGTGGAGATGAAGAAGGGTTAGATTGATACGAGAGGACTTTTGAAG
rJMSF017D23+ TGTTTGGTGATAGCAGTGGAGATGAAGAAGGGTTAGATTGATACGAGAGGACTTTTGAAG
rJMSF019G20+ TGTTTGGTGATAGCAGTGGAGATGAAGAAGGGTTAGATTGATACGAGAGGACTTTTGAAG
rJMSF045E13+ TGTTTGGTGATAGCAGTGGAGATGAAGAAGGGTTAGATTGATACGAGAGGACTTTTGAAG
rJMFF014B23+ TGTTTGGTGATAGCAGTGGAGATGAAGAAGGGTTAGATNGATACGAGAGGACTTTTGAAG
JMFS111D09+ TGTTTGGTGATAGCAGTGGAGATGAAGAAGGGTTAGATTGATACGAGAGGACTTTTGAAG
____________________________________________________________
consensus TGTTTGGTGATAGCAGTGGAGATGAAGAAGGGTTAGATTGATACGAGAGGACTTTTGAAG
. : . : . : . : . : . :
rJMSF007D07+ TGTTCTGTACCGTTGATGCCTGTTAGCAACCAAAATCTATTACAGATGTTTATCAACTAT
rJMSF017D23+ TGTTCTGTACCGTTGATGCCTGTTAGCAACCAAAATCTATTACAGATGTTTATCAACTAT
rJMSF019G20+ TGTTCTGTACCGTTGATGCCTGTTAGCAACCAAAATCTATTACAGATGTTTATCAACTAT
rJMSF045E13+ TGTTCTGTACCGTTGATGCCTGTTAGCAACCAAAATCTATTACAGATGTTTATCAACTAT
rJMFF014B23+ TGTTCTGTACCGTTGATGCCTGTTAGCAACCAAAATCTATTACAGATGTTTATCAACTAT
JMFS111D09+ TGTTCTGTACCGTTGATGCCTGTTAGCAACCAAAATCTATTACAGATGTTTATCAACTAT
____________________________________________________________
consensus TGTTCTGTACCGTTGATGCCTGTTAGCAACCAAAATCTATTACAGATGTTTATCAACTAT
. : . : . : . : . : . :
rJMSF007D07+ TGAAAACATGTTCACCTATTTTGTACAAACAAAGTGAAACCTATGACTCCTGCTAATCTC
rJMSF017D23+ TGAAAACATGTTCACCTATTTTGTACAAACAAAGTGAAACCTATGACTCCTGCTAATCTC
rJMSF019G20+ TGAAAACATGTTCACCTATTTTGTACAAACAAAGTGAAACCTATGACTCCTGCTAATCTC
rJMSF045E13+ TGAAAACATGTTCACCTATTTTGTACAAACAAAGTGAAACCTATGACTCCTGCTAATCTC
rJMFF014B23+ TGAAAACATGTTCACCTATTTTGTACAAACAAAGTGAAACCTATGACTCCTGCTAATCTC
JMFS111D09+ TGAAAACATGTTCACCTATTTTGTACAAACAAAGTGAAACCTATGACTCCTGCTAATCTC
____________________________________________________________
consensus TGAAAACATGTTCACCTATTTTGTACAAACAAAGTGAAACCTATGACTCCTGCTAATCTC
. : . : . : . : . : . :
rJMSF007D07+ CTCTTGTCCCATGAAAGGTCTACGCAGGATGAACAAAGGTAC
rJMSF017D23+ CTCTTGTCCCATGAAAGGTCTACGCAGGATGAACAAAGGTACNCCGTACACCTCTCCACT
rJMSF019G20+ CTCTTGTCCCATGAAAGGTCTACGCAGGATGAACAAAGGTACACCGTACACCTCTCCACT
rJMSF045E13+ CTCTTGTCCCATGAAAGGTCTACGCAGGATGAACAAAGGTACACCGTACACCTCTCCACT
rJMFF014B23+ CTCTTGTCCCATGAAAGGTCTACGCAGGATGAACAAAGGTACACCGTACACCTCTCCACT
JMFS111D09+ CTCTTGTCCCATGAAAGGTCTACGCAGGATGAACAAAGGTACACCGTACACCTCTCCACT
____________________________________________________________
consensus CTCTTGTCCCATGAAAGGTCTACGCAGGATGAACAAAGGTACACCGTACACCTCTCCACT
. : . : . : . : . : . :
rJMSF017D23+ CAAGTGGGTTAGTTTAATTACATAAAACTT
rJMSF019G20+ CAAGTGGGTTAGTTTAATTACATAAAACTTTTAC
rJMSF045E13+ CAAGTGGGTTAGTTTAATTACATAAAACTTTTAC
rJMFF014B23+ CAAGTGGGTTAGTTTAATTACATAAAACTTTTACATGAATATTTTCTCTCTGGCTTTTTA
JMFS111D09+ CAAGTGGGTTAGTTTAATTACATAAAACTTTTACATGAATATTTTCTCTCTGGCTTTTTA
____________________________________________________________
consensus CAAGTGGGTTAGTTTAATTACATAAAACTTTTACATGAATATTTTCTCTCTGGCTTTTTA
. : . : . : . : . : . :
rJMFF014B23+ TTTAATCAAAACTCA
JMFS111D09+ TTTAATCAAAACTCATATTCTAGCTCAAAAAAAAAAAAAAAAAACTCGAAACTAGTTCTC
____________________________________________________________
consensus TTTAATCAAAACTCATATTCTAGCTCAAAAAAAAAAAAAAAAAACTCGAAACTAGTTCTC