Contig 007660:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS105A08Sequence603007660 (3)
JMFS152C10Sequence599007660 (3)ref|XP_009767447.1|67.8PREDICTED: uncharacterized protein LOC104218607 [Nicotiana sylvestris]
JMFS153C11Sequence619007660 (3)ref|XP_009767447.1|58.5PREDICTED: uncharacterized protein LOC104218607 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS152C10+                 GAGGCCCATCTGGCGGAGAAGGCGNAGNCGGCGTTCTTCGACGGAGGAAGGCTG
                      ____________________________________________________________
consensus                   GAGGCCCATCTGGCGGAGAAGGCGNAGNCGGCGTTCTTCGACGGAGGAAGGCTG
 
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JMFS152C10+           GGAGATCCAGACATCGTATTTGTTAGCAGCGGGGAACCTGGGAACAATAAGCGGGTCGTC
                      ____________________________________________________________
consensus             GGAGATCCAGACATCGTATTTGTTAGCAGCGGGGAACCTGGGAACAATAAGCGGGTCGTC
 
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JMFS152C10+           ATAATTGGGGGAACCGAGGCGGGAATTGGGATCATCCTCCTCCTCGTCGTCGTCGGACGG
JMFS153C11+                                             TCCTCCTCCTCGTCGTCGTCGGACGG
JMFS105A08+                                             TCCTCCTCCTCGTCGTCGTCGGACGG
                      ____________________________________________________________
consensus             ATAATTGGGGGAACCGAGGCGGGAATTGGGATCATCCTCCTCCTCGTCGTCGTCGGACGG
 
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JMFS152C10+           CAAAGCGGAGGAAGAGCACGAAGTGTTGGCGGAAGAGAGTAGGCGGTCAAGCGAGTCGTG
JMFS153C11+           CAAAGCGGAGGAAGAGCACGAAGTGTTGGCGGAAGAGAGTAGGCGGTCAAGCGAGTCGTG
JMFS105A08+           CAAAGCGGAGGAAGAGCACGAAGTGTTGGCGGAAGAGAGTAGGCGGTCAAGCGAGTCGTG
                      ____________________________________________________________
consensus             CAAAGCGGAGGAAGAGCACGAAGTGTTGGCGGAAGAGAGTAGGCGGTCAAGCGAGTCGTG
 
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JMFS152C10+           AAAACACTCGTCTTCGTCTTCTTCGTCGGGGCGGGCTCTGCTCATCGTTGTGGTGGTCGT
JMFS153C11+           AAAACACTCGTCTTCGTCTTCTTCGTCGGGGCGGGCTCTGCTCATCGTTGTGGTGGTCGT
JMFS105A08+           AAAACACTCGTCTTCGTCTTCTTCGTCGGGGCGGGCTCTGCTCATCGTTGTGGTGGTCGT
                      ____________________________________________________________
consensus             AAAACACTCGTCTTCGTCTTCTTCGTCGGGGCGGGCTCTGCTCATCGTTGTGGTGGTCGT
 
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JMFS152C10+           TGTTCTCCCCCGCCGGGCCGAGGCATTTCCATGAAAATGCCCCGCGCAACGCCACCGTCG
JMFS153C11+           TGTTCTCCCCCGCCGGGCCGAGGCATTTCCATGAAAATGCCCCGCGCAACGCCACCGTCG
JMFS105A08+           TGTTCTCCCCCGCCGGGCCGAGGCATTTCCATGAAAATGCCCCGCGCAACGCCACCGTCG
                      ____________________________________________________________
consensus             TGTTCTCCCCCGCCGGGCCGAGGCATTTCCATGAAAATGCCCCGCGCAACGCCACCGTCG
 
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JMFS152C10+           CCCCGATCCAACCCGGGTCGGATTTCCTTCAGCCCCACCTTCTCTTACACTCTCAGTATA
JMFS153C11+           CCCCGATCCAACCCGGGTCGGATTTCCTTCAGCCCCACCTTCTCTTACACTCTCAGTATA
JMFS105A08+           CCCCGATCCAACCCGGGTCGGATTTCCTTCAGCCCCACCTTCTCTTACACTCTCAGTATA
                      ____________________________________________________________
consensus             CCCCGATCCAACCCGGGTCGGATTTCCTTCAGCCCCACCTTCTCTTACACTCTCAGTATA
 
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JMFS152C10+           TATATATATATATATATATATAATATATATATATAATGAAGAGAGAATGAGTGAAGTCAA
JMFS153C11+           TATATATATATATATATATATAATATATATATATAATGAAGAGAGAATGAGTGAAGTCAA
JMFS105A08+           TATATATATATATATATATATAATATATATATATAATGAAGAGAGAATGAGTGAAGTCAA
                      ____________________________________________________________
consensus             TATATATATATATATATATATAATATATATATATAATGAAGAGAGAATGAGTGAAGTCAA
 
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JMFS152C10+           GAAGAGCGTACAACAATGTGGGGAAGCGGGAGGATCAGACAATATCGAAGATGGGTTTTA
JMFS153C11+           GAAGAGCGTACAACAATGTGGGGAAGCGGGAGGATCAGACAATATCGAAGATGGGTTTTA
JMFS105A08+           GAAGAGCGTACAACAATGTGGGGAAGCGGGAGGATCAGACAATATCGAAGATGGGTTTTA
                      ____________________________________________________________
consensus             GAAGAGCGTACAACAATGTGGGGAAGCGGGAGGATCAGACAATATCGAAGATGGGTTTTA
 
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JMFS152C10+           ACGTTGGGAACTCAGATCCGATGATGGGCTTAGAGAGAGAAGGGTACAGAGAAGAGCGAA
JMFS153C11+           ACGTTGGGAACTCAGATCCGATGATGGGCTTAGAGAGAGAAGGGTACAGAGAAGAGCGAA
JMFS105A08+           ACGTTGGGAACTCAGATCCGATGATGGGCTTAGAGAGAGAAGGGTACAGAGAAGAGCGAA
                      ____________________________________________________________
consensus             ACGTTGGGAACTCAGATCCGATGATGGGCTTAGAGAGAGAAGGGTACAGAGAAGAGCGAA
 
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JMFS152C10+           GCCCT                                                       
JMFS153C11+           GCCCTATGAGTGAGAACGAAAGAGAGAGAGAGAGACAATAACTGTTTGTGGGGTTTTGGG
JMFS105A08+           GCCCTATGAGTGAGAACGAAAGAGAGAGAGAGAGACAATAACTGTTTGTGGGGTTTTGGG
                      ____________________________________________________________
consensus             GCCCTATGAGTGAGAACGAAAGAGAGAGAGAGAGACAATAACTGTTTGTGGGGTTTTGGG
 
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JMFS153C11+           GG                                                          
JMFS105A08+           GGTGAGGGAGAGAGTAGAGGTGGGAGATGCTTTTGTGCGTCCTATGTAGGGGAGATTGGT
                      ____________________________________________________________
consensus             GGTGAGGGAGAGAGTAGAGGTGGGAGATGCTTTTGTGCGTCCTATGTAGGGGAGATTGGT