Contig 007657:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS103A06Sequence564007657 (3)ref|XP_009587832.1|1e-48PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540
JMFS104A10Sequence622007657 (3)ref|XP_009587832.1|2e-57PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540
JMFS131H11Sequence605007657 (3)ref|XP_009587832.1|7e-61PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540

Alignment

This contig is upended


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JMFS131H11+                               GTATAAGATAAGCCACACTAAGTTGGTGAGATTTCCGATT
JMFS104A10+                                                 TAAGTTGGTGAGATTTCCGATT
                      ____________________________________________________________
consensus                                 GTATAAGATAAGCCACACTAAGTTGGTGAGATTTCCGATT
 
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JMFS131H11+           TCCGCCGGAATGGAGCCGGTTAACCGGTTGGAATTCAAATAAAGTTGTTCCAGCTCCGGC
JMFS103A06+                                         GAATTCAAATAAAGTTGTTCCAGCTCCGGC
JMFS104A10+           TCCGCCGGAATGGAGCCGGTTAACCGGTTGGAATTCAAATAAAGTTGTTCCAGCTCCGGC
                      ____________________________________________________________
consensus             TCCGCCGGAATGGAGCCGGTTAACCGGTTGGAATTCAAATAAAGTTGTTCCAGCTCCGGC
 
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JMFS131H11+           AGGTGACAAATCGGCGGCGGGATTTCGCCGGTAAGTGCATTGTCGCTAAGGTCCAAGTGC
JMFS103A06+           AGGTGACAAATCGGCGGCGGGATTTCGCCGGTAAGTGCATTGTCGCTAAGGTCCAAGTGC
JMFS104A10+           AGGTGACAAATCGGCGGCGGGATTTCGCCGGTAAGTGCATTGTCGCTAAGGTCCAAGTGC
                      ____________________________________________________________
consensus             AGGTGACAAATCGGCGGCGGGATTTCGCCGGTAAGTGCATTGTCGCTAAGGTCCAAGTGC
 
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JMFS131H11+           TTCAACCCCTGAAGAACTCCAATCTCCTCCGGGACGGCGCCGGTGAGATTCGTCCCGGTT
JMFS103A06+           TTCAACCCCTGAAGAACTCCAATCTCCTCCGGGACGGCGCCGGTGAGATTCGTCCCGGTT
JMFS104A10+           TTCAACCCCTGAAGAACTCCAATCTCCTCCGGGACGGCGCCGGTGAGATTCGTCCCGGTT
                      ____________________________________________________________
consensus             TTCAACCCCTGAAGAACTCCAATCTCCTCCGGGACGGCGCCGGTGAGATTCGTCCCGGTT
 
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JMFS131H11+           AAAACCAGCTTGGTCAGAGATTTCAACGACGAGAAATCGGAAGGGACAACGCCGTGGAGA
JMFS103A06+           AAAACCAGCTTGGTCAGAGATTTCAACGACGAGAAATCGGAAGGGACAACGCCGTGGAGA
JMFS104A10+           AAAACCAGCTTGGTCAGAGATTTCAACGACGAGAAATCGGAAGGGACAACGCCGTGGAGA
                      ____________________________________________________________
consensus             AAAACCAGCTTGGTCAGAGATTTCAACGACGAGAAATCGGAAGGGACAACGCCGTGGAGA
 
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JMFS131H11+           TCAACATACCTTAATTCCAACCCCACCACTTCCATTTCAAAGTTGCATGTGACGCCGAAC
JMFS103A06+           TCAACATACCTTAATTCCAACCCCACCACTTCCATTTCAAAGTTGCATGTGACGCCGAAC
JMFS104A10+           TCAACATACCTTAATTCCAACCCCACCACTTCCATTTCAAAGTTGCATGTGACGCCGAAC
                      ____________________________________________________________
consensus             TCAACATACCTTAATTCCAACCCCACCACTTCCATTTCAAAGTTGCATGTGACGCCGAAC
 
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JMFS131H11+           CACCCACAGGGACTCGCATCGCCGGAGTTCCAATTCTCCAGAGCCTCCACCGCCCCCTTC
JMFS103A06+           CACCCACAGGGACTCGCATCGCCGGAGTTCCAATTCTCCAGAGCCTCCACCGCCCCCTTC
JMFS104A10+           CACCCACAGGGACTCGCATCGCCGGAGTTCCAATTCTCCAGAGCCTCCACCGCCCCCTTC
                      ____________________________________________________________
consensus             CACCCACAGGGACTCGCATCGCCGGAGTTCCAATTCTCCAGAGCCTCCACCGCCCCCTTC
 
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JMFS131H11+           ATGCTCCTCTTCCACTCCAGCAGCGCCTCCCCCTGGCGGTTGACGGCGGCGGAGCGGTGG
JMFS103A06+           ATGCTCCTCTTCCACTCCAGCAGCGCCTCCCCCTGGCGGTTGACGGCGGCGGAGCGGTGG
JMFS104A10+           ATGCTCCTCTTCCACTCCAGCAGCGCCTCCCCCTGGCGGTTGACGGCGGCGGAGCGGTGG
                      ____________________________________________________________
consensus             ATGCTCCTCTTCCACTCCAGCAGCGCCTCCCCCTGGCGGTTGACGGCGGCGGAGCGGTGG
 
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JMFS131H11+           AACAGAACAACAAGAAAAAGGAAAAGGGTCCATGGAAAAACAGGCATTACAGCAAATTAA
JMFS103A06+           AACAGAACAACAAGAAAAAGGAAAAGGGTCCATGGAAAAACAGGCATTACAGCAAATTAA
JMFS104A10+           AACAGAACAACAAGAAAAAGGAAAAGGGTCCATGGAAAAACAGGCATTACAGCAAATTAA
                      ____________________________________________________________
consensus             AACAGAACAACAAGAAAAAGGAAAAGGGTCCATGGAAAAACAGGCATTACAGCAAATTAA
 
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JMFS131H11+           AATGGTGGGAGTGGAGTGGTGTATACTGTATAGTTTTTGCTACAAACTCCAAGAGAGAGA
JMFS103A06+           AATGGTGGGAGTGGAGTGGTGTATACTGTATAGTTTTTGCTACAAACTCCAAGAGAGAGA
JMFS104A10+           AATGGTGGGAGTGGAGTGGTGTATACTGTATAGTTTTTGCTACAAACTCCAAGAGAGAGA
                      ____________________________________________________________
consensus             AATGGTGGGAGTGGAGTGGTGTATACTGTATAGTTTTTGCTACAAACTCCAAGAGAGAGA
 
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JMFS131H11+           GAGAGAAGGGAAATTGTTGTTTTAG                                   
JMFS103A06+           GAGAGAAGGGAAATTGTTGTTTTAGTTTTTGGTGTTCTTGAGGTTGGAGCCTGG      
JMFS104A10+           GAGAGAAGGGAAATTGTTGTTTTAGTTTTTGGTGTTCTTGAGGTTGGAGCCTGGGGATAA
                      ____________________________________________________________
consensus             GAGAGAAGGGAAATTGTTGTTTTAGTTTTTGGTGTTCTTGAGGTTGGAGCCTGGGGATAA