Contig 007655:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS022A09+                                               GTCCTCCTCATCATGTCCACAATT
JMFS153B03+                                                                  CAATT
                      ____________________________________________________________
consensus                                                 GTCCTCCTCATCATGTCCACAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS022A09+           TTCACACTCTTCTTGTCACTGTCACTCTGCTTACAAGAATGGTTTGGGCAGCCACAACAA
JMFS153B03+           TTCACACTCTTCTTGTCACTGTCACTCTGCTTACAAGAATGGTTTGGGCAGCCACAACAA
                      ____________________________________________________________
consensus             TTCACACTCTTCTTGTCACTGTCACTCTGCTTACAAGAATGGTTTGGGCAGCCACAACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS022A09+           TGATGATGTTCTGTGGTGGGGAAATTCTTTTCAAATTCATAACGTGGCTGGTCTGTTGAA
JMFS153B03+           TGATGATGTTCTGTGGTGGGGAAATTCTTTTCAAATTCATAACGTGGCTGGTCTGTTGAA
                      ____________________________________________________________
consensus             TGATGATGTTCTGTGGTGGGGAAATTCTTTTCAAATTCATAACGTGGCTGGTCTGTTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS022A09+           AAATATGGGGGAGGAGGTACATAATGAACAGGATACGATCCGGGATAGGCAGAATATATG
JMFS153B03+           AAATATGGGGGAGGAGGTACATAATGAACAGGATACGATCCGGGATAGGCAGAATATATG
JMFS102E01+                                   TGAACAGGATACGATCCGGGATAGGCAGAATATATG
                      ____________________________________________________________
consensus             AAATATGGGGGAGGAGGTACATAATGAACAGGATACGATCCGGGATAGGCAGAATATATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS022A09+           CCATGACAATGATGAGGTGGAGCAGCATAAGGATAAGGAGGTCTGAAAGCACAGCAGCTT
JMFS153B03+           CCATGACAATGATGAGGTGGAGCAGCATAAGGATAAGGAGGTCTGAAAGCACAGCAGCTT
JMFS102E01+           CCATGACAATGATGAGGTGGAGCAGCATAAGGATAAGGAGGTCTGAAAGCACAGCAGCTT
                      ____________________________________________________________
consensus             CCATGACAATGATGAGGTGGAGCAGCATAAGGATAAGGAGGTCTGAAAGCACAGCAGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS022A09+           GGTTGAGGAGGTTGATAATGGCAGCCATGGAATTCTGGAACTGGATATGCATAGCCGCCG
JMFS153B03+           GGTTGAGGAGGTTGATAATGGCAGCCATGGAATTCTGGAACTGGATATGCATAGCCGCCG
JMFS102E01+           GGTTGAGGAGGTTGATAATGGCAGCCATGGAATTCTGGAACTGGATATGCATAGCCGCCG
                      ____________________________________________________________
consensus             GGTTGAGGAGGTTGATAATGGCAGCCATGGAATTCTGGAACTGGATATGCATAGCCGCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS022A09+           CCTTGATTGCCACCAAACTGAAACGGCCAAAATTCACAAGGCACCATTGGGTCCACTTTC
JMFS153B03+           CCTTGATTGCCACCAAACTGAAACGGCCAAAATTCACAAGGCACCATTGGGTCCACTTTC
JMFS102E01+           CCTTGATTGCCACCAAACTGAAACGGCCAAAATTCACAAGGCACCATTGGGTCCACTTTC
                      ____________________________________________________________
consensus             CCTTGATTGCCACCAAACTGAAACGGCCAAAATTCACAAGGCACCATTGGGTCCACTTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS022A09+           AAATGAGGCCTGCCAATTTGACCGCTTGGACAATAATATGGGGCAGACATCACTTGATTC
JMFS153B03+           AAATGAGGCCTGCCAATTTGACCGCTTGGACAATAATATGGGGCAGACATCACTTGATTC
JMFS102E01+           AAATGAGGCCTGCCAATTTGACCGCTTGGACAATAATATGGGGCAGACATCACTTGATTC
                      ____________________________________________________________
consensus             AAATGAGGCCTGCCAATTTGACCGCTTGGACAATAATATGGGGCAGACATCACTTGATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS022A09+           CTATGGTATGGGTAATATGAATCCATCCACCTTTTCACAGAATAGTATGATTGTCCTTCA
JMFS153B03+           CTATGGTATGGGTAATATGAATCCATCCACCTTTTCACAGAATAGTATGATTGTCCTTCA
JMFS102E01+           CTATGGTATGGGTAATATGAATCCATCCACCTTTTCACAGAATAGTATGATTGTCCTTCA
                      ____________________________________________________________
consensus             CTATGGTATGGGTAATATGAATCCATCCACCTTTTCACAGAATAGTATGATTGTCCTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS022A09+           GAAATCAAAGTATGTAAAAAACTAGAAAAACAAAAACCACCAATCTGTTCCACGAATCCA
JMFS153B03+           GAAATCAAAGTGTGTAAAAAACTAGAAAAACAAAAACCACCAATCTGTTCCACGAATCCA
JMFS102E01+           GAAATCAAAGTGTGTAAAAAACTAGAAAAACAAAAACCACCAATCTGTTCCACGAATCCA
                      ____________________________________________________________
consensus             GAAATCAAAGTGTGTAAAAAACTAGAAAAACAAAAACCACCAATCTGTTCCACGAATCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS022A09+           GATGACTCAGTTGTCAGCTCAAATCGATCCACCAACCCAAAAAAAGAAGGAAAAAAATCG
JMFS153B03+           GATGACTCAGTTGTCAGCTCAAATCGATCCACCAACCCAAAAAAAGAAGGAAAAAAATCG
JMFS102E01+           GATGACTCAGTTGTCAGCTCAAATCGATCCACCAACCCAAAAAAAGAAGGAAAAAAATCG
                      ____________________________________________________________
consensus             GATGACTCAGTTGTCAGCTCAAATCGATCCACCAACCCAAAAAAAGAAGGAAAAAAATCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS022A09+           GAGCGCAGTTGT                                                
JMFS153B03+           GAGCGCAGTTGT                                                
JMFS102E01+           GAGCGCAGTTGTTTATCTGATCAGTACCTTTCTGATTTTTATTTTTTTTCCTGAAATTCC
                      ____________________________________________________________
consensus             GAGCGCAGTTGTTTATCTGATCAGTACCTTTCTGATTTTTATTTTTTTTCCTGAAATTCC