Contig 007653:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001O22Sequence490007653 (11)ref|XP_009606207.1|9e-50PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 [Nicotiana 221007620 (7)emb|CDP13064.1|6e-28unnamed protein product [Coffea canephora]
JMFF010D02Sequence520007653 (11)ref|XP_009788524.1|2e-74PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 [Nicotiana 704007620 (7)emb|CDP13064.1|1e-125unnamed protein product [Coffea canephora]
JMFS014B01Sequence594007653 (11)ref|XP_009606207.1|9e-76PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 [Nicotiana
JMFS025E11Sequence605007653 (11)ref|XP_011070302.1|8e-27PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 isoform X1
JMFS065A02Sequence620007653 (11)ref|XP_009788524.1|1e-108PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 [Nicotiana
JMFS101F12Sequence616007653 (11)ref|XP_011070302.1|6e-26PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 isoform X1
JMFS118F07Sequence604007653 (11)ref|XP_009606207.1|1e-45PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 [Nicotiana
JMFS140H04Sequence628007653 (11)ref|XP_009606207.1|4e-72PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 [Nicotiana
JMFS163H03Sequence595007653 (11)ref|XP_011070302.1|2e-25PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 isoform X1
JMSF002O09Sequence233007653 (11)ref|XP_009788524.1|1e-13PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 [Nicotiana 682007620 (7)emb|CDP13064.1|1e-126unnamed protein product [Coffea canephora]
JMSF033H08Sequence678007653 (11)ref|XP_009788524.1|7e-76PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 [Nicotiana

Alignment

This contig is upended


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JMFS065A02+                ACGCTTGCCACAGGTTACGGTCGAACCTGCCACCGAGATCCGGGGAGAGAGGAAG
                      ____________________________________________________________
consensus                  ACGCTTGCCACAGGTTACGGTCGAACCTGCCACCGAGATCCGGGGAGAGAGGAAG
 
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JMFS065A02+           CATGTAATGGAACAAAGGCCACAGCTGCTGTTTACAAAAACCGTGGTAGAATTTGCTGAA
                      ____________________________________________________________
consensus             CATGTAATGGAACAAAGGCCACAGCTGCTGTTTACAAAAACCGTGGTAGAATTTGCTGAA
 
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JMFS065A02+           GAGCTCGGGGGGAACGAAAGCCGGGACACATTTGAACGTCTCGAGCAACGTTTGTGCCAC
JMFS014B01+                     GGAACGAAAGCCGGGACACATTTGAACGTCTCGAGCAACGTNTGTGCCAC
JMFS140H04+                                 GGGACACATTTGAACGTCTCGAGCAACGTNTGTGCCAC
JMFF010D02+                     GGAACGAAAGCCGGGACACATTTGAACGTCTCGAGCAACGTTTGTGCCAC
JMSF033H08+                     GGAACGAAAGCCGGGACACATTTGAACGTCTCGAGCAACGTTTGTGCCAC
                      ____________________________________________________________
consensus             GAGCTCGGGGGGAACGAAAGCCGGGACACATTTGAACGTCTCGAGCAACGTTTGTGCCAC
 
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JMFS065A02+           ATCGTCTTGCTCGTTCGGGTCGATTATTTCTTCCTTGAGACAACCAACATAAATCACTTC
JMFS014B01+           ATCGTCTTGCTCGTTCGGGTCGATTATTTCTTCCTTGAGACAACCAACATAAATCACTTC
JMFS140H04+           ATCGTCTTGCTCGTTCGGGTCGATTATTTCTTCCTTGAGACAACCAACATAAATCACTTC
JMFF010D02+           ATCGTCTTGCTCGTTCGGGTCGATTATTTCTTCCTTGAGACAACCAACATAAATCACTTC
JMSF033H08+           ATCGTCTTGCTCGTTCGGGTCGATTATTTCTTCCTTGAGACAACCAACATAAATCACTTC
                      ____________________________________________________________
consensus             ATCGTCTTGCTCGTTCGGGTCGATTATTTCTTCCTTGAGACAACCAACATAAATCACTTC
 
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JMFS065A02+           CACATCTTCCCCGAGCCCATCTTTGAGCTGCAAGAGAAGAGAATCCTCGTCCCAACTAAA
JMFS014B01+           CACATCTTCCCCGAGCCCATCTTTGAGCTGCAAGAGAAGAGAATCCTCGTCCCAACTAAA
JMFS140H04+           CACATCTTCCCCGAGCCCATCTTTGAGCTGCAAGAGAAGAGAATCCTCGTCCCAACTAAA
JMFF010D02+           CACATCTTCCCCGAGCCCATCTTTGAGCTGCAAGAGAAGAGAATCCTCGTCCCAACTAAA
JMFF001O22+                 TTCCCCGAGCCCATCTTTGAGCTGCAAGAGAAGAGAATCCTCGTCCCAANTAAA
JMSF033H08+           CACATCTTCCCCGAGCCCATCTTTGAGCTGCAAGAGAAGAGAATCCTCGTCCCAACTAAA
JMFS118F07+                                   GAGCTGCAAGAGAAGAGAATCCTCGTCCCAACTAAA
                      ____________________________________________________________
consensus             CACATCTTCCCCGAGCCCATCTTTGAGCTGCAAGAGAAGAGAATCCTCGTCCCAACTAAA
 
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JMFS065A02+           GTTCCACCCTTCTTCCCCATCCGTTCTCCTATGCGCCCGAAGTGGAAGCTGGTTCCCAAC
JMFS014B01+           GTTCCACCCTTCTTCCCCATCCGTTCTCCTATGCGCCCGAAGTGGAAGCTGGTTCCCAAC
JMFS140H04+           GTTCCACCCTTCTTCCCCATCCGTTCTCCTATGCGCCCGAAGTGGAAGCTGGTTCCCAAC
JMFF010D02+           GTTCCACCCTTCTTCCCCATCCGTTCTCCTATGCGCCCGAAGTGGAAGCTGGTTCCCAAC
JMFF001O22+           GTTCCACCCTTCTTCCCCATCCGTTCTCCTATGCGCCCGAAGTGGAAGCTGGTTCCCAAC
JMSF033H08+           GTTCCACCCTTCTTCCCCATCCGTTCTCCTATGCGCCCGAAGTGGAAGCTGGTTCCCAAC
JMFS118F07+           GTTCCACCCTTCTTCCCCATCCGTTCTCCTATGCGCCCGAAGTGGAAGCTGGTTCCCAAC
JMFS025E11+                                                    GTGGAAGCTGGTTCCCAAC
JMFS163H03+                                                         AGCTGGTTCCCAAC
JMFS101F12+                                                       GAAGCTGGTTCCCAAC
                      ____________________________________________________________
consensus             GTTCCACCCTTCTTCCCCATCCGTTCTCCTATGCGCCCGAAGTGGAAGCTGGTTCCCAAC
 
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JMFS065A02+           AATAATCATCCTCTCTTGAGAAATCGAGGAGGGAACATCCGACCCACCATTGCTTCTACT
JMFS014B01+           AATAATCATCCTCTCTTGAGAAATCGAGGAGGGAACATCCGACCCACCATTGCTTCTACT
JMFS140H04+           AATAATCATCCTCTCTTGAGAAATCGAGGAGGGAACATCCGACCCACCATTGCTTCTACT
JMFF010D02+           AATAATCATCCTCTCTTGAGAAATCGAGGAGGGAACATCCGACCCACCATTGCTTCTACT
JMFF001O22+           AATAATCATCCTCTCTTGAGAAATCGAGGAGGGAACATCCGACCCACCATTGCTTCTACT
JMSF033H08+           AATAATCATCCTCTCTTGAGAAATCGAGGAGGGAACATCCGACCCACCATTGCTTCTACT
JMFS118F07+           AATAATCATCCTCTCTTGAGAAATCGAGGAGGGAACATCCGACCCACCATTGCTTCTACT
JMFS025E11+           AATAATCATCCTCTCTTGAGAAATCGAGGAGGGAACATCCGACCCACCATTGCTTCTACT
JMFS163H03+           AATAATCATCCTCTCTTGAGAAATCGAGGAGGGAACATCCGACCCACCATTGCTTCTACT
JMFS101F12+           AATAATCATCCTCTCTTGAGAAATCGAGGAGGGAACATCCGACCCACCATTGCTTCTACT
                      ____________________________________________________________
consensus             AATAATCATCCTCTCTTGAGAAATCGAGGAGGGAACATCCGACCCACCATTGCTTCTACT
 
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JMFS065A02+           CTCGTCGTCGAGCTCAGATAACACCCCGGCTACAGTGGCAACCCGGGAGAGTTTCTTCCC
JMFS014B01+           CTCGTCGTCGAGCTCAGATAACACCCCGGCTACAGTGGCAACCCGGGAGAGTTTCTTCCC
JMSF002O09+            TCGTCGTCGAGCTCAGATAACACCCCGGCTACAGTGGCAACCCGGGAGAGTTTCTTCCC
JMFS140H04+           CTCGTCGTCGAGCTCAGATAACACCCCGGCTACAGTGGCAACCCGGGAGAGTTTCTTCCC
JMFF010D02+           CTCGTCGTCGAGCTCAGATAACACCCCGGCTACAGTGGCAACCCGGGAGAGTTTCTTCCC
JMFF001O22+           CTCGTCGTCGAGCTCAGATAACACCCCGGCTACAGTGGCAACCCGGGAGAGTTTCTTCCC
JMSF033H08+           CTCGTCGTCGAGCTCAGATAACACCCCGGCTACAGTGGCAACCCGGGAGAGTTTCTTCCC
JMFS118F07+           CTCGTCGTCGAGCTCAGATAACACCCCGGCTACAGTGGCAACCCGGGAGAGTTTCTTCCC
JMFS025E11+           CTCGTCGTCGAGCTCAGATAACACCCCGGCTACAGTGGCAACCCGGGAGAGTTTCTTCCC
JMFS163H03+           CTCGTCGTCGAGCTCAGATAACACCCCGGCTACAGTGGCAACCCGGGAGAGTTTCTTCCC
JMFS101F12+           CTCGTCGTCGAGCTCAGATAACACCCCGGCTACAGTGGCAACCCGGGAGAGTTTCTTCCC
                      ____________________________________________________________
consensus             CTCGTCGTCGAGCTCAGATAACACCCCGGCTACAGTGGCAACCCGGGAGAGTTTCTTCCC
 
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JMFS065A02+           CGCCCGCCCAAAAGTTAGGGATTCACCAGAAGCAAGGTCCAATAAGTTCGAGTATGACCT
JMFS014B01+           CGCCCGCCCAAAAGTTAGGGATTCACCAGAAGCAAGGTCCAATAAGTTCGAGTATGACCT
JMSF002O09+           CGCCCGCCCAAAAGTTAGGGATTCACCAGAAGCAAGGTCCAATAAGTTCGAGTATGACCT
JMFS140H04+           CGCCCGCCCAAAAGTTAGGGATTCACCAGAAGCAAGGTCCAATAAGTTCGAGTATGACCT
JMFF010D02+           CGCCCGCCCAAAAGTTAGGGATTCACCAGAAGCAAGGTCCAATAAGTTCGAGTATGACCT
JMFF001O22+           CGCCCGCCCAAAAGTTAGGGATTCACCAGAAGCAAGGTCCAATAAGTTCGAGTATGACCT
JMSF033H08+           CGCCCGCCCAAAAGTTAGGGATTCACCAGAAGCAAGGTCCAATAAGTTCGAGTATGACCT
JMFS118F07+           CGCCCGCCCAAAAGTTAGGGATTCACCAGAAGCAAGGTCCAATAAGTTCGAGTATGACCT
JMFS025E11+           CGCCCGCCCAAAAGTTAGGGATTCACCAGAAGCAAGGTCCAATAAGTTCGAGTATGACCT
JMFS163H03+           CGCCCGCCCAAAAGTTAGGGATTCACCAGAAGCAAGGTCCAATAAGTTCGAGTATGACCT
JMFS101F12+           CGCCCGCCCAAAAGTTAGGGATTCACCAGAAGCAAGGTCCAATAAGTTCGAGTATGACCT
                      ____________________________________________________________
consensus             CGCCCGCCCAAAAGTTAGGGATTCACCAGAAGCAAGGTCCAATAAGTTCGAGTATGACCT
 
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JMFS065A02+           CGAAACCATTGTCGATTCACCACAATATATACACCTCTCGAAAATCAACAAAACCAGCAA
JMFS014B01+           CGAAACCATTGTCGATTCACCACAATATATACACCTCTCGAAAATCAACAAAACCAGCAA
JMSF002O09+           CGAAACCATTGTCGATTCACCACAATATATACACCTCTCGAAAATCAACAAAACCAGCAA
JMFS140H04+           CGAAACCATTGTCGATTCACCACAATATATACACCTCTCGAAAATCAACAAAACCAGCAA
JMFF010D02+           CGAAACCATTGTCGATTCACCACAATATATACACCTCTCGAAAATCAACAAAACCAGCAA
JMFF001O22+           CGAAACCATTGTCGATTCACCACAATATATACACCTCTCGAAAATCAACAAAACCAGCAA
JMSF033H08+           CGAAACCATTGTCGATTCACCACAATATATACACCTCTCGAAAATCAACAAAACCAGCAA
JMFS118F07+           CGAAACCATTGTCGATTCACCACAATATATACACCTCTCGAAAATCAACAAAACCAGCAA
JMFS025E11+           CGAAACCATTGTCGATTCACCACAATATATACACCTCTCGAAAATCAACAAAACCAGCAA
JMFS163H03+           CGAAACCATTGTCGATTCACCACAATATATACACCTCTCGAAAATCAACAAAACCAGCAA
JMFS101F12+           CGAAACCATTGTCGATTCACCACAATATATACACCTCTCGAAAATCAACAAAACCAGCAA
                      ____________________________________________________________
consensus             CGAAACCATTGTCGATTCACCACAATATATACACCTCTCGAAAATCAACAAAACCAGCAA
 
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JMFS065A02+           GTGATAGAAATCAAACTCT                                         
JMFS014B01+           GTGATAGAAATCAAACTCT                                         
JMSF002O09+           GTGATAGAAATCAAACTCTG                                        
JMFS140H04+           GTGATAGAAATCAAACTCTGAATAAATGACAAAATCAAGAAAACCCAAGCAGTAGATAAT
JMFF010D02+           GTGATAGAAATCAAACTCT                                         
JMFF001O22+           GTGATAGAAATCAAACTCT                                         
JMSF033H08+           GTGATAGAAATCAAACTCTGAATAAATGACAAAATCAAGAAAACCCAAGCAGTAGATAAT
JMFS118F07+           GTGATAGAAATCAAACTCTGAATAAATGACAAAATCAAGAAAACCCAAGCAGTAGATAAT
JMFS025E11+           GTGATAGAAATCAAACTCTGAATAAATGACAAAATCAAGAAAACCCAAGCAGTAGATAAT
JMFS163H03+           GTGATAGAAATCAAACTCTGAATAAATGACAAAATCAAGAAAACCCAAGCAGTAGATAAT
JMFS101F12+           GTGATAGAAATCAAACTCTGAATAAATGACAAAATCAAGAAAACCCAAGCAGTAGATAAT
                      ____________________________________________________________
consensus             GTGATAGAAATCAAACTCTGAATAAATGACAAAATCAAGAAAACCCAAGCAGTAGATAAT
 
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JMFS140H04+           CCATCATTAAAGATGAGAAAAAGCAATAACCACTGAAATCGAAAGCTACCCAATCTTCCA
JMSF033H08+           CCATCATTAAAGATGAGAAAAAGCAATAACCACTGAAATCGAAAGCTACCCAATCTTCCA
JMFS118F07+           CCATCATTAAAGATGAGAAAAAGCAATAACCACTGAAATCGAAAGCTACCCAATCTTCCA
JMFS025E11+           CCATCATTAAAGATGAGAAAAAGCAATAACCACTGAAATCGAAAGCTACCCAATCTTCCA
JMFS163H03+           CCATCATTAAAGATGAGAAAAAGCAATAACCACTGAAATCGAAAGCTACCCAATCTTCCA
JMFS101F12+           CCATCATTAAAGATGAGAAAAAGCAATAACCACTGAAATCGAAAGCTACCCAATCTTCCA
                      ____________________________________________________________
consensus             CCATCATTAAAGATGAGAAAAAGCAATAACCACTGAAATCGAAAGCTACCCAATCTTCCA
 
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JMFS140H04+           TCAAGAGCAGTAATGTCCAAGAGAGTGCGAGAGAATCCACTAGGCTAG            
JMSF033H08+           TCAAGAGCAGTAATGTCCAAGAGAGTGCGAGAGAATCCACTAGGCTAGTTACTAGTAAAA
JMFS118F07+           TCAAGAGCAGTAATGTCCAAGAGAGTGCGAGAGAATCCACTAGGCTAGTTACTAGTAAAA
JMFS025E11+           TCAAGAGCAGTAATGTCCAAGAGAGTGCGAGAGAATCCACTAGGCTAGTTACTAGTAAAA
JMFS163H03+           TCAAGAGCAGTAATGTCCAAGAGAGTGCGAGAGAATCCACTAGGCTAGTTACTAGTAAAA
JMFS101F12+           TCAAGAGCAGTAATGTCCAAGAGAGTGCGAGAGAATCCACTAGGCTAGTTACTAGTAAAA
                      ____________________________________________________________
consensus             TCAAGAGCAGTAATGTCCAAGAGAGTGCGAGAGAATCCACTAGGCTAGTTACTAGTAAAA
 
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JMSF033H08+           GCAACACTACAACTAATTCAAAC                                     
JMFS118F07+           GCAACACTACAACTAATTCAAACAAATATTCTGAGGTTTCAACAAAGTGAATAAATTACT
JMFS025E11+           GCAACACTACAACTAATTCAAACAAATATTCTGAGGTTTCAACAAAGTGAATAAATTACT
JMFS163H03+           GCAACACTACAACTAATTCAAACAAATATTCTGAGGTTTCAACAAAGTGAATAAATTACT
JMFS101F12+           GCAACACTACAACTAATTCAAACAAATATTCTGAGGTTTCAACAAAGTGAATAAATTACT
                      ____________________________________________________________
consensus             GCAACACTACAACTAATTCAAACAAATATTCTGAGGTTTCAACAAAGTGAATAAATTACT
 
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JMFS118F07+           ATACTGTTTGCCAGTGCTCGCACGTAGC                                
JMFS025E11+           ATACTGTTTGCCAGTGCTCGCACGTAGCAAAAACAAAGAACCCAAAATAATATAAATAAA
JMFS163H03+           ATACTGTTTGCCAGTGCTCGCACGTAGCAAAAACAAAGAACCCAAAATAATATAAATAAA
JMFS101F12+           ATACTGTTTGCCAGTGCTCGCACGTAGCAAAAACAAAGAACCCAAAATAATATAAATAAA
                      ____________________________________________________________
consensus             ATACTGTTTGCCAGTGCTCGCACGTAGCAAAAACAAAGAACCCAAAATAATATAAATAAA
 
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JMFS025E11+           TAAAAATGACCAATCAGTAAGCAAACTACAGTAAATAAGAACCTTT              
JMFS163H03+           TAAAAATGACCAATCAGTAAGCAAACTACAGTAAATAAGAA                   
JMFS101F12+           TAAAAATGACCAATCAGTAAGCAAACTACAGTAAATAAGAACCTTTGATAGTTTGAGAGA
                      ____________________________________________________________
consensus             TAAAAATGACCAATCAGTAAGCAAACTACAGTAAATAAGAACCTTTGATAGTTTGAGAGA