clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF005C15 | Sequence | 505 | 007650 (3) | ref|XP_009796569.1| | 5e-82 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 iso | 780 | 006782 (3) | ref|XP_009796563.1| | 5e-58 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 iso |
JMFS098F12 | Sequence | 627 | 007650 (3) | ref|XP_009796569.1| | 1e-45 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 iso | |||||
JMSF023A02 | Sequence | 587 | 007650 (3) | ref|XP_010653158.1| | 2e-25 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Vi | 746 | 006782 (3) | ref|XP_009796563.1| | 9e-58 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 iso |
This contig is upended
. : . : . : . : . : . :
JMFF005C15+ CCATAAAGCCGCTCTTCATACTGGAAATCATATGGTGGACTTTGAGAATAAGA
____________________________________________________________
consensus CCATAAAGCCGCTCTTCATACTGGAAATCATATGGTGGACTTTGAGAATAAGA
. : . : . : . : . : . :
JMFF005C15+ ATGATACGAACTTGCCCGTCTCGTCTCATCTACATGGCCTCTAAAGTTTTGTGTACCCCT
____________________________________________________________
consensus ATGATACGAACTTGCCCGTCTCGTCTCATCTACATGGCCTCTAAAGTTTTGTGTACCCCT
. : . : . : . : . : . :
JMFF005C15+ TGGAGGTCTATCCGTCGACTGTGCTCCAGCATATCGTTTATCCACATAAACATTCTTTAT
____________________________________________________________
consensus TGGAGGTCTATCCGTCGACTGTGCTCCAGCATATCGTTTATCCACATAAACATTCTTTAT
. : . : . : . : . : . :
JMFF005C15+ AAATTCTCGGACTTTATCAACATTACTGTTATCAGGTAACCTTTGCCTTTGTGGGTCCCA
JMFS098F12+ TTGTGGGTCCCA
____________________________________________________________
consensus AAATTCTCGGACTTTATCAACATTACTGTTATCAGGTAACCTTTGCCTTTGTGGGTCCCA
. : . : . : . : . : . :
JMFF005C15+ GTTTTTCAGATATGTCTCCCTTGCACGCTGATTACCACCATTTTGAAGAGATTCAACTTC
JMSF023A02+ TCAGATATGTCTCCCNNGCACGCTGANTACCACCANTTTGAAGAGANTCAACTTC
JMFS098F12+ GTTTTTCAGATATGTCTCCCTTGCACGCTGATTACCACCATTTTGAAGAGATTCAACTTC
____________________________________________________________
consensus GTTTTTCAGATATGTCTCCCTTGCACGCTGATTACCACCATTTTGAAGAGATTCAACTTC
. : . : . : . : . : . :
JMFF005C15+ TTGGGAAGTAAATTTAGCCATGGACACAGACTTCACACGATGAGTAAACTCACGGTGTAT
JMSF023A02+ TTGGGAAGTAAATTTAGCCANGGACACAGACTTCACACGATGAGTAAACTCACGGTGTAT
JMFS098F12+ TTGGGAAGTAAATTTAGCCATGGACACAGACTTCACACGATGAGTAAACTCACGGTGTAT
____________________________________________________________
consensus TTGGGAAGTAAATTTAGCCATGGACACAGACTTCACACGATGAGTAAACTCACGGTGTAT
. : . : . : . : . : . :
JMFF005C15+ TCCACTGCAAGTCATACAAACAAAAGTCCAGAAGTTTGTACAGACATACTGGGGTCCCAA
JMSF023A02+ TCCACTGCAAGTCANACANACAAAAGTCCAGAAGTNTGTACAGACANACTGGGGTCCCAN
JMFS098F12+ TCCACTGCAAGTCATACAAACAAAAGTCCAGAAGTTTGTACAGACATACTGGGGTCCCAA
____________________________________________________________
consensus TCCACTGCAAGTCATACAAACAAAAGTCCAGAAGTTTGTACAGACATACTGGGGTCCCAA
. : . : . : . : . : . :
JMFF005C15+ GCTGTCGCAGTTAATGCATCGGCGATTGGGAGGGAGTTTCATGAGCCCCCGGATTATCTT
JMSF023A02+ GCNGTCGCAGNTAATGCATCGGCGANTGGGAGGGAGTNTCATGAGCCCCCGGANTATNTT
JMFS098F12+ GCTGTCGCAGTTAATGCATCGGCGATTGGGAGGGAGTTTCATGAGCCCCCGGATTATCTT
____________________________________________________________
consensus GCTGTCGCAGTTAATGCATCGGCGATTGGGAGGGAGTTTCATGAGCCCCCGGATTATCTT
. : . : . : . : . : . :
JMFF005C15+ CTCGTTCCGCTCTTCTTCCCTTCTG
JMSF023A02+ CTCGTTCCGCTCTTCTTCCCNTCTGCNGCTCATNTTCGCTCCTCGCCCTCACTAAGTCAA
JMFS098F12+ CTCGTTCCGCTCTTCTTCCCTTCTGCTGCTCATCTTCGCTCCTCGCCCTCACTAAGTCAA
____________________________________________________________
consensus CTCGTTCCGCTCTTCTTCCCTTCTGCTGCTCATCTTCGCTCCTCGCCCTCACTAAGTCAA
. : . : . : . : . : . :
JMSF023A02+ TTCTGACGCTTATCGTCCCGGAAGAAGCGAANGAATTTGCTCCAGAAACAGTAAACCGAA
JMFS098F12+ TTCTGACGCTTATCGTCCCGGAAGAAGCGAATGAATTTGCTCCAGAAACAGTAAACCGAA
____________________________________________________________
consensus TTCTGACGCTTATCGTCCCGGAAGAAGCGAATGAATTTGCTCCAGAAACAGTAAACCGAA
. : . : . : . : . : . :
JMSF023A02+ ACTCAAATCTGATAAACGGAATANTAATACANACACGTAAATATAACANACACGGAGAAA
JMFS098F12+ ACTCAAATCTGATAAACGGAATACTAATACAAACACGTAAATATAACATACACGGAGAAA
____________________________________________________________
consensus ACTCAAATCTGATAAACGGAATACTAATACAAACACGTAAATATAACATACACGGAGAAA
. : . : . : . : . : . :
JMSF023A02+ GAGANNGACTGTGAACTTGTGANTTTAGGTTTTTGAAATNGAAAGAGTAAGAGAAGCTCA
JMFS098F12+ GAGATTGACTGTGAACTTGTGATTTTAGGTTTTTGAAATTGAAAGAGTAAGAGAAGCTCA
____________________________________________________________
consensus GAGATTGACTGTGAACTTGTGATTTTAGGTTTTTGAAATTGAAAGAGTAAGAGAAGCTCA
. : . : . : . : . : . :
JMSF023A02+ CTT
JMFS098F12+ CTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCGTATATATATATATATAAA
____________________________________________________________
consensus CTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTATATATATATATATAAA
. : . : . : . : . : . :
JMFS098F12+ ATAAATATATATCTATTTCTCTGTATGCAAATCCGCCTTTTGATTTCAATTTCGAGTTGC
____________________________________________________________
consensus ATAAATATATATCTATTTCTCTGTATGCAAATCCGCCTTTTGATTTCAATTTCGAGTTGC