Contig 007648:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS061A08+                                                              GTTCAAATC
JMFS097B09+                                                            TCGTTCNAATC
                      ____________________________________________________________
consensus                                                              TCGTTCAAATC
 
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JMFS061A08+           AAAATCATCCATTATGCCCGCTAATAGTTCGTCCTCATCCCCGGGAAGAAAGTTCCCGAG
JMFS097B09+           AAAATCATCCATTATGCCCGCTAATAGTTCGTCCTCATCNCC-GGAAGAAAGTTCCCGAG
                      ____________________________________________________________
consensus             AAAATCATCCATTATGCCCGCTAATAGTTCGTCCTCATCCCCGGGAAGAAAGTTCCCGAG
 
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JMFS061A08+           TGGACCCGTTTCATCTTCCAACGGATATTTACCTCCATCTTCTAGATGAAATTGAGTTAA
JMFS097B09+           TGGACCCGTTTCATCTTCCAACGGATATTTACCTCCATCTTCTAGATGAAATTGAGTTAA
                      ____________________________________________________________
consensus             TGGACCCGTTTCATCTTCCAACGGATATTTACCTCCATCTTCTAGATGAAATTGAGTTAA
 
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JMFS061A08+           GCTAGGCGAGCTATCATCAATTGATTGCCCACACTGCTCTGTCTTGTTCGAGATTAATTT
JMFS097B09+           GCTAGGCGAGCTATCATCAATTGATTGCCCACACTGCTCTGTCTTGTTCGAGATTAATTT
                      ____________________________________________________________
consensus             GCTAGGCGAGCTATCATCAATTGATTGCCCACACTGCTCTGTCTTGTTCGAGATTAATTT
 
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JMFS061A08+           TTCGTGTGGAAGAACGGGCAATGAGCTCGAGAACAAGCTTGCATCACTCGAGGCATGGTG
JMFS097B09+           TTCGTGTGGAAGAACGGGCAATGAGCTCGAGAACAAGCTTGCATCACTCGAGGCATGGTG
                      ____________________________________________________________
consensus             TTCGTGTGGAAGAACGGGCAATGAGCTCGAGAACAAGCTTGCATCACTCGAGGCATGGTG
 
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JMFS061A08+           TGCCGCAATTCCAAGGGGGATCGACCAAGCATTTCTCACTTCCCCCTGAGAGTCATCTAA
JMFS097B09+           TGCCGCAATTCCAAGGGGGATCGACCAAGCATTTCTCACTTCCCCCTGAGAGTCATCTAA
                      ____________________________________________________________
consensus             TGCCGCAATTCCAAGGGGGATCGACCAAGCATTTCTCACTTCCCCCTGAGAGTCATCTAA
 
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JMFS061A08+           AACAGGAATCTTCGAAGGCGACTCCATTTGTCA----CTCATAGAGAGAGAGAGACACAA
JMFS097B09+           AACAGGAATCTTCGAAGGCGACTCCATTTGTCACTTCCTCATAGAGAGAGAGAGACACAA
                      ____________________________________________________________
consensus             AACAGGAATCTTCGAAGGCGACTCCATTTGTCACTTCCTCATAGAGAGAGAGAGACACAA
 
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JMFS061A08+           AATCAAACAAGTCTGGACACTTTATTGCAAAATTAACAAGTCCAAAAGCTAAAATATAAT
JMFS097B09+           AATCAAACAAGTCTGGACACTTTATTGCAAAATTAACAAGTCCAAAAGCTAAAATATAAT
                      ____________________________________________________________
consensus             AATCAAACAAGTCTGGACACTTTATTGCAAAATTAACAAGTCCAAAAGCTAAAATATAAT
 
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JMFS061A08+           AATAAGAGGGAGATGAAAGGAGAGAAACGAAGACCAAAAACAGTTCCGTAGAAGCAGAGA
JMFS097B09+           AATAAGAGGGAGATGAAAGGAGAGAAACGAAGACCAAAAACAGTTCCGTAGAAGCAGAGA
                      ____________________________________________________________
consensus             AATAAGAGGGAGATGAAAGGAGAGAAACGAAGACCAAAAACAGTTCCGTAGAAGCAGAGA
 
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JMFS061A08+           AATTGTTTTCTTATACTCTTTCACTTCTCCCCCGCCGGAAAACAAGTGC           
JMFS097B09+           AATTGTTTTCTTATACTCTTTCACTTCTCCCCCGCCGGAAAACAAGTGCXXXXXXXXXXX
                      ____________________________________________________________
consensus             AATTGTTTTCTTATACTCTTTCACTTCTCCCCCGCCGGAAAACAAGTGCNNNNNNNNNNN
 
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JMFS097B09+           XXXXXXXXXXXXXXXXXXXXXXXGAGAGAGAAAAAGCTGGGTTTAGATATTAAGAAAAGA
                      ____________________________________________________________
consensus             NNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAAAAAGCTGGGTTTAGATATTAAGAAAAGA