Contig 007647:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033B03Sequence285007647 (4)639012355 (3)emb|CDO97267.1|5e-43unnamed protein product [Coffea canephora]
JMFS095G07Sequence610007647 (4)emb|CDO97267.1|1e-07unnamed protein product [Coffea canephora]
JMSF030N05Sequence285007647 (4)671012355 (3)emb|CDO97267.1|2e-51unnamed protein product [Coffea canephora]
JMSF035F23Sequence588007647 (4)emb|CDO97267.1|4e-06unnamed protein product [Coffea canephora]650012355 (3)emb|CDO97267.1|2e-48unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF035F23+                              GTTGAAGTCTTTGAGGATGAGGAAGACACAGAGGATGAATT
JMFS095G07+                                                             AGGATGAATT
                      ____________________________________________________________
consensus                                GTTGAAGTCTTTGAGGATGAGGAAGACACAGAGGATGAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF035F23+           NGAAGAAGAAGTTGAAGGAGAAGGGGACATGTATNTAGAAGAGACCACTCTAGCTTTGGG
JMFS095G07+           CGAAGAAGAAGTTGAAGGAGAAGGGGACATGTATCTAGAAGAGACCACTCTAGCTTTGGG
                      ____________________________________________________________
consensus             CGAAGAAGAAGTTGAAGGAGAAGGGGACATGTATCTAGAAGAGACCACTCTAGCTTTGGG
 
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JMSF035F23+           TCTNTTAGGGTTATTGTGAACTCCATTATTGTCCTTNTCAGACGGCAATAATGGAGGTCT
JMFS095G07+           TCTCTTAGGGTTATTGTGAACTCCATTATTGTCCTTCTCAGACGGCAATAATGGAGGTCT
                      ____________________________________________________________
consensus             TCTCTTAGGGTTATTGTGAACTCCATTATTGTCCTTCTCAGACGGCAATAATGGAGGTCT
 
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JMSF030N05+                                                                    TGC
JMSF035F23+           CCTTGTGTTAATTTGAGGCTCCCCTTGTGAGCTGGTTTTGGGGTTTTGAGCTGAAGCTGC
JMFS095G07+           CCTTGTGTTAATTTGAGGCTCCCCTTGTGAGCTGGTTTTGGGGTTTTGAGCTGAAGCTGC
                      ____________________________________________________________
consensus             CCTTGTGTTAATTTGAGGCTCCCCTTGTGAGCTGGTTTTGGGGTTTTGAGCTGAAGCTGC
 
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JMSF030N05+           ACCAGAAAACGCAGCCACCACCATCATCACACTCACACACACAAAATCACAAACACATAC
JMSF035F23+           ACCAGAAAACGCAGCCACCACCATCATCACACTCACACACACAAAATCACAAACACATAC
JMFS095G07+           ACCAGAAAACGCAGCCACCACCATCATCACACTCACACACACAAAATCACAAACACATAC
                      ____________________________________________________________
consensus             ACCAGAAAACGCAGCCACCACCATCATCACACTCACACACACAAAATCACAAACACATAC
 
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JMSF030N05+           ACACACACTACCCCCAAATTCGCCTCTCACATTGTAATTTCACACCAAAATACACTTACC
JMSF035F23+           ACACACACTACCCCCAAATTCGCCTCTCACATTGTAATTTCACACCAAAATACACTTACC
JMFF033B03+                                       ACATTGTAATTTCACACCAAAATACACTTACC
JMFS095G07+           ACACACACTACCCCCAAATTCGCCTCTCACATTGTAATTTCACACCAAAATACACTTACC
                      ____________________________________________________________
consensus             ACACACACTACCCCCAAATTCGCCTCTCACATTGTAATTTCACACCAAAATACACTTACC
 
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JMSF030N05+           CAGAATCCCCTTTCGCCTCTGCATCCCCTAAAACCTGCAACAATCAACAAATCCGACCAT
JMSF035F23+           CAGAATCCCCTTTCGCCTCTGCATCCCCTAAAACCTGCAACAATCAACAAATCCGACCAT
JMFF033B03+           CAGAATCCCCTTTNGCCTCTGCATCCCNTAAAACCTGCAACAATCAACAAATCCGACCAT
JMFS095G07+           CAGAATCCCCTTTCGCCTCTGCATCCCCTAAAACCTGCAACAATCAACAAATCCGACCAT
                      ____________________________________________________________
consensus             CAGAATCCCCTTTCGCCTCTGCATCCCCTAAAACCTGCAACAATCAACAAATCCGACCAT
 
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JMSF030N05+           CAATCACAATCCCAGTCCGGGTCTTTCAAAAATCCCACATTTCCTCAAGATTCCTGCTTT
JMSF035F23+           CAATCACAATCCCAGTCCGGGTCTTTCAAAAATCCCACATTTCCTCAAGATTCCTGCTTT
JMFF033B03+           CAATCACAATCCCAGTCCGGGTCTTTCAAAAATCCCACATTTCCTCAAGATTCCTGCTTT
JMFS095G07+           CAATCACAATCCCAGTCCGGGTCTTTCAAAAATCCCACATTTCCTCAAGATTCCTGCTTT
                      ____________________________________________________________
consensus             CAATCACAATCCCAGTCCGGGTCTTTCAAAAATCCCACATTTCCTCAAGATTCCTGCTTT
 
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JMSF030N05+           TCCTCTCAATTTTTCCCTCGAAAGACAAATACGAAGAA                      
JMSF035F23+           TCCTCTCAATTTTTCCCTCGAAAGACAAATACGAAGAACAAGTAAAAAACTGATTTTTTT
JMFF033B03+           TCCTCTCAATTTTTCCCTNGAAAGNCAAATACGAAGAACAAGTAAAAAANTGATTTTTTT
JMFS095G07+           TCCTCTCAATTTTTCCCTCGAAAGACAAATACGAAGAACAAGTAAAAAACTGATTTTTTT
                      ____________________________________________________________
consensus             TCCTCTCAATTTTTCCCTCGAAAGACAAATACGAAGAACAAGTAAAAAACTGATTTTTTT
 
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JMSF035F23+           TTCCGGGAAGTAGTAGTAGTGGCCTCAGAGAGAGTGTCTGTGCCCGTGAGAGAAGGGTGA
JMFF033B03+           TTTCGGGAAGTAGTAGTAGTGGCCTCAGAGAGAGTGTCTGTGCCCGTGAGAGAAGGGTGA
JMFS095G07+           TTCCGGGAAGTAGTAGTAGTGGCCTCAGAGAGAGTGTCTGTGCCCGTGAGAGAAGGGTGA
                      ____________________________________________________________
consensus             TTCCGGGAAGTAGTAGTAGTGGCCTCAGAGAGAGTGTCTGTGCCCGTGAGAGAAGGGTGA
 
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JMSF035F23+           GATTT                                                       
JMFF033B03+           GATTT                                                       
JMFS095G07+           GATTTGGGGGCACAGAGAATTCGTACATCCTTTAGCGAGGGTGGTTTTGGGGTTTTGTGA
                      ____________________________________________________________
consensus             GATTTGGGGGCACAGAGAATTCGTACATCCTTTAGCGAGGGTGGTTTTGGGGTTTTGTGA