Contig 007643:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS092G02Sequence576007643 (2)ref|XP_011078723.1|8e-17PREDICTED: protein FAR1-RELATED SEQUENCE 3-like isoform X2 [Sesamum indicum]
JMSF034A23Sequence715007643 (2)ref|XP_006347699.1|2e-58PREDICTED: protein FAR1-RELATED SEQUENCE 3-like isoform X1 [Solanum tuberosum] 715022590ref|XP_009616992.1|277PREDICTED: protein FAR1-RELATED SEQUENCE 3-like [Nicotiana tomentosiformis] ref|

Alignment

This contig is upended


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JMSF034A23+                                                        TGCAGGGTGGAATAA
                      ____________________________________________________________
consensus                                                          TGCAGGGTGGAATAA
 
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JMSF034A23+           AATTTACTGGTGTAACAGGGCTGATAGTCCTTGTTATATGATTAGCCTCTAATGAAAAAG
                      ____________________________________________________________
consensus             AATTTACTGGTGTAACAGGGCTGATAGTCCTTGTTATATGATTAGCCTCTAATGAAAAAG
 
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JMSF034A23+           CATTCTGCAGAACCTGATTAGTATNGGCTGCAATTTGAGTACATTGGTTAGTAGCCATTG
                      ____________________________________________________________
consensus             CATTCTGCAGAACCTGATTAGTATNGGCTGCAATTTGAGTACATTGGTTAGTAGCCATTG
 
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JMSF034A23+           CAATTGGAACACCTTTAGTACTGACTGCATTATGAACACCTTGATTAGTATTGCAACTTA
                      ____________________________________________________________
consensus             CAATTGGAACACCTTTAGTACTGACTGCATTATGAACACCTTGATTAGTATTGCAACTTA
 
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JMSF034A23+           CATGGTTTCCATCCATGGAGACCATAGCATCAGCTTGGCTGTCAGGAATTTCCACCACAT
                      ____________________________________________________________
consensus             CATGGTTTCCATCCATGGAGACCATAGCATCAGCTTGGCTGTCAGGAATTTCCACCACAT
 
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JMSF034A23+           TTTTTGAAGCACCAGCAAAATGTCTTCGAGGCCGAAGATAATGCACCTTGCTGGGACCCA
                      ____________________________________________________________
consensus             TTTTTGAAGCACCAGCAAAATGTCTTCGAGGCCGAAGATAATGCACCTTGCTGGGACCCA
 
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JMSF034A23+           CTATAGAATGGTTGTGATCTTCAACAAACTTAGTCACAATCCAATTTTCTGTGTTTTTTT
                      ____________________________________________________________
consensus             CTATAGAATGGTTGTGATCTTCAACAAACTTAGTCACAATCCAATTTTCTGTGTTTTTTT
 
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JMSF034A23+           CTCTCTATTCGGATCATTGCATTGCAACTTTCAACATTCTTCCTCTTAAAAACCTCTCTG
                      ____________________________________________________________
consensus             CTCTCTATTCGGATCATTGCATTGCAACTTTCAACATTCTTCCTCTTAAAAACCTCTCTG
 
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JMSF034A23+           GAACATGAAAAGTCCCAACTAACAATGGGTCCATCAGGCTTAGCCCGGCTGTACTGACCA
JMFS092G02+                                   ATGGGTCCATCAGGCTTAGCCCGGCTGTACTGACCA
                      ____________________________________________________________
consensus             GAACATGAAAAGTCCCAACTAACAATGGGTCCATCAGGCTTAGCCCGGCTGTACTGACCA
 
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JMSF034A23+           ACATGAGTACTAAAACCCCCATGCCTAGCATATGCATCATAATATTTCCTTGCTGCTTCT
JMFS092G02+           ACATGAGTACTAAAACCCCCATGCCTAGCATATGCATCATAATATTTCCTTGCTGCTTCT
                      ____________________________________________________________
consensus             ACATGAGTACTAAAACCCCCATGCCTAGCATATGCATCATAATATTTCCTTGCTGCTTCT
 
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JMSF034A23+           TCAGATTCAAACACCATTCCAACAAATGGCTTTTCAACCTCATTACTAGACTCTTCTTCA
JMFS092G02+           TCAGATTCAAACACCATTCCAACAAATGGCTTTTCAACCTCATTACTAGACTCTTCTTCA
                      ____________________________________________________________
consensus             TCAGATTCAAACACCATTCCAACAAATGGCTTTTCAACCTCATTACTAGACTCTTCTTCA
 
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JMSF034A23+           GTAGAATATCCAAGCAAATTCTGTTTTCCATCCTTATGTTCTGCATGCGTTTCTCTATTC
JMFS092G02+           GTAGAATATCCAAGCAAATTCTGTTTTCCATCCTTATGTTCTGCATGCGTTTCTCTATTC
                      ____________________________________________________________
consensus             GTAGAATATCCAAGCAAATTCTGTTTTCCATCCTTATGTTCTGCATGCGTTTCTCTATTC
 
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JMSF034A23+           CTTTTTCCATCCTTTTTCCTCTCAATGTTTGCTTCCCCAT                    
JMFS092G02+           CTTTTTCCATCCTTTTTCCTCTCAATGTTTGCTTCCCCATCTTTTGGCCTCTGGTTCCCC
                      ____________________________________________________________
consensus             CTTTTTCCATCCTTTTTCCTCTCAATGTTTGCTTCCCCATCTTTTGGCCTCTGGTTCCCC
 
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JMFS092G02+           TTGACACCAATCACCTCACCATCCATCTTGTCAAGGGAATGACATTAACAATTTTATTAA
                      ____________________________________________________________
consensus             TTGACACCAATCACCTCACCATCCATCTTGTCAAGGGAATGACATTAACAATTTTATTAA
 
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JMFS092G02+           CTTTTCAGGTTTTGAATGGCCTTTGGTCACATCTCGAACGCCATTTCCAAAAGCTTCACA
                      ____________________________________________________________
consensus             CTTTTCAGGTTTTGAATGGCCTTTGGTCACATCTCGAACGCCATTTCCAAAAGCTTCACA
 
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JMFS092G02+           GCATCGCCATAAACAATTTTGATGAGCTATGGCGGTCGACGTCACGGGCCCTTCGGAGCT
                      ____________________________________________________________
consensus             GCATCGCCATAAACAATTTTGATGAGCTATGGCGGTCGACGTCACGGGCCCTTCGGAGCT
 
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JMFS092G02+           ACCGAGTTTCTCTTCGGTGGGCGGGCTGGAGTGTAATTCTGTTGCAGAGXXXXXXXXXXX
                      ____________________________________________________________
consensus             ACCGAGTTTCTCTTCGGTGGGCGGGCTGGAGTGTAATTCTGTTGCAGAGNNNNNNNNNNN
 
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JMFS092G02+           XXXXXXXXXXXXXXXXXXXXXXXGTGTTTGTGGAGGGTCCGATTGGGTAAATGGACAACC
                      ____________________________________________________________
consensus             NNNNNNNNNNNNNNNNNNNNNNNGTGTTTGTGGAGGGTCCGATTGGGTAAATGGACAACC