Contig 007640:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF032L17+                                                        AAGATGAACTTTGTG
                      ____________________________________________________________
consensus                                                          AAGATGAACTTTGTG
 
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JMSF032L17+           CATGGGAAGCATTTGGCATGCCTCTTCCAGCGAAAAAACTAGGTGCAGTGGAGCCTTGTT
JMFS011D01+                                                                 CTTGTT
                      ____________________________________________________________
consensus             CATGGGAAGCATTTGGCATGCCTCTTCCAGCGAAAAAACTAGGTGCAGTGGAGCCTTGTT
 
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JMSF032L17+           GAATCGGTTGAGGCACAATATCAACTGAGCTGAACCTCAAATCACGCTGGAACCAAACAC
JMFS011D01+           GAATCGGTTGAGGCACAATATCAACTGAGCTGAACCTCAAATCACGCTGANACCAAACAC
                      ____________________________________________________________
consensus             GAATCGGTTGAGGCACAATATCAACTGAGCTGAACCTCAAATCACGCTGGAACCAAACAC
 
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JMSF032L17+           CTGGTTCCCTTCCTCGACCTCTACAGTCTCCAGACAGTAAGTTCGGTGTTATTCTTTGGT
JMFS011D01+           CTGGTTCCCTTCCTCGACCTCTACAGTCTCCAGACAGTAAGTTCGGTGTTATTCTTTGGT
JMFS087C06+                                        CCAGACAGTAAGTTCGGTGTTATTCTTTGGT
                      ____________________________________________________________
consensus             CTGGTTCCCTTCCTCGACCTCTACAGTCTCCAGACAGTAAGTTCGGTGTTATTCTTTGGT
 
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JMSF032L17+           TTGCAATTTGTGGGGCTCTGGGAAATGAATTCATGCCTCGTCTTTTTTCGAATCTCGTGG
JMFS011D01+           TTGCAATTTGTGGGGCTCTGGGAAATGAATTCATGCCTCGTCTTTTTTCGAATCTCGTGG
JMFS087C06+           TTGCAATNTGTGGGGCTCTGGGAAATGAATTCATGCCTCGTCTTTTTTCGAATCTCGTGG
                      ____________________________________________________________
consensus             TTGCAATTTGTGGGGCTCTGGGAAATGAATTCATGCCTCGTCTTTTTTCGAATCTCGTGG
 
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JMSF032L17+           TCTGTTCTTTTCCAAAAGTGGCAGAATCAGATTCCCGGTAAAGGTGTCCATTTTCAAAGG
JMFS011D01+           TCTGTTCTTTTCCAAAAGTGGCAGAATCAGATTCCCGGTAAAGGTGTCCATTTTCAAAGG
JMFS087C06+           TCTGTTCTTTTCCAAAAGTGGCAGAATCAGATTCCCGGTAAAGGTGTCCATTTTCAAAGG
                      ____________________________________________________________
consensus             TCTGTTCTTTTCCAAAAGTGGCAGAATCAGATTCCCGGTAAAGGTGTCCATTTTCAAAGG
 
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JMSF032L17+           GCTTGTGTTTCCTGTAAGGCCTGGTCAAAACTGATTCATAAGGATCCATCTCAACAGATT
JMFS011D01+           GCTTGTGTTTCCTGTAAGGCCTGGTCAAAACTGATTCATAAGGATCCATCTCAACAGATT
JMFS087C06+           GCTTGTGTTTCCTGTAAGGCCTGGTCAAAACTGATTCATAAGGATCCATCTCAACAGATT
                      ____________________________________________________________
consensus             GCTTGTGTTTCCTGTAAGGCCTGGTCAAAACTGATTCATAAGGATCCATCTCAACAGATT
 
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JMSF032L17+           GGGAACGTGTTCCCTTCCTACGGTGCTTATGATTACGATCATCATCATCCTCTTCACTGA
JMFS011D01+           GGGAACGTGTTCCCTTCCTACGGTGCTTATGATTACGATCATCATCATCCTCTTCACTGA
JMFS087C06+           GGGAACGTGTTCCCTTCCTACGGTGCTTATGATTACGATCATCATCATCCTCTTCACTGA
                      ____________________________________________________________
consensus             GGGAACGTGTTCCCTTCCTACGGTGCTTATGATTACGATCATCATCATCCTCTTCACTGA
 
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JMSF032L17+           TTTCTTTTTCTTCAGGATCACTGTCACTATCAGAAGTTGAAAGTGCTGGCTTCAGAGATG
JMFS011D01+           TTTCTTTTTCTTCAGGATCACTGTCACTATCAGAAGTTGAAAGTGCTGGCTTCAGAGATG
JMFS087C06+           TTTCTTTTTCTTCAGGATCACTGTCACTATCAGAAGTTGAAAGTGCTGGCTTCAGAGATG
                      ____________________________________________________________
consensus             TTTCTTTTTCTTCAGGATCACTGTCACTATCAGAAGTTGAAAGTGCTGGCTTCAGAGATG
 
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JMSF032L17+           AAACTTTGAGCACCATGAGTTATAGTGGTCAGACTAAATTTATGACACCAAAAAATCTAT
JMFS011D01+           AAACTTTGAGCACCATGAGTTATAGTGGTCAGACTAAATTTATGACACCAAAAAATCTAT
JMFS087C06+           AAACTTTGAGCACCATGAGTTATAGTGGTCAGACTAAATTTATGACACCAAAAAATCTAT
                      ____________________________________________________________
consensus             AAACTTTGAGCACCATGAGTTATAGTGGTCAGACTAAATTTATGACACCAAAAAATCTAT
 
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JMSF032L17+           GTTCCAGGTAAAAGTAAAAGAGATAATAGTACTAATTCGTTGGACCAAATCAACTCAGCA
JMFS011D01+           GTTCCAGGTAAAAGTAAAAGAGATAATAGTACTAATTCGTTGGACCAAATCAACTCAGCA
JMFS087C06+           GTTCCAGGTAAAAGTAAAAGAGATAATAGTACTAATTCGTTGGACCAAATCAACTCAGCA
                      ____________________________________________________________
consensus             GTTCCAGGTAAAAGTAAAAGAGATAATAGTACTAATTCGTTGGACCAAATCAACTCAGCA
 
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JMSF032L17+           ATACCTTTAGGACCGGGGATTCGATCGATTTGGATTGCGTCTCGGGGTTAGGGTTTTGAT
JMFS011D01+           ATACCTTTAGGACCGGGGATTCGATCGATTTGGATTGCGTCTCGGGGTTAGGGTTTTGAT
JMFS087C06+           ATACCTTTAGGACCGGGGATTCGATCGATTTGGATTGCGTCTCGGGGTTAGGGTTTTGAT
                      ____________________________________________________________
consensus             ATACCTTTAGGACCGGGGATTCGATCGATTTGGATTGCGTCTCGGGGTTAGGGTTTTGAT
 
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JMSF032L17+           TTTCCCAGCC                                                  
JMFS011D01+           TTTCCCAGCC                                                  
JMFS087C06+           TTTCCCAGCCGAATTCGTATGTTTGTTTGTGTGTATATTATATTATATGTATGTATGTAC
                      ____________________________________________________________
consensus             TTTCCCAGCCGAATTCGTATGTTTGTTTGTGTGTATATTATATTATATGTATGTATGTAC
 
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JMFS087C06+           ACAAATATAGTTATTTTATATAAATGAACGTCGCCTCCAGAGTCCAGTACTCATGGGCTG
                      ____________________________________________________________
consensus             ACAAATATAGTTATTTTATATAAATGAACGTCGCCTCCAGAGTCCAGTACTCATGGGCTG