Contig 007635:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS011E03Sequence620007635 (9)ref|XP_009764531.1|9e-116PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 homolog A-like [Nicot
JMFS017C03Sequence604007635 (9)ref|XP_009764531.1|9e-111PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 homolog A-like [Nicot
JMFS065G10Sequence642007635 (9)ref|XP_009764531.1|3e-112PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 homolog A-like [Nicot
JMFS069A01Sequence619007635 (9)ref|XP_009764531.1|2e-107PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 homolog A-like [Nicot
JMFS078B03Sequence643007635 (9)ref|XP_009764531.1|3e-112PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 homolog A-like [Nicot
JMFS081D06Sequence474007635 (9)ref|XP_009628529.1|3e-66PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 homolog A-like [Nicot
JMFS136D09Sequence602007635 (9)ref|XP_009764531.1|2e-102PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 homolog A-like [Nicot
JMFS165G01Sequence622007635 (9)ref|XP_009764531.1|3e-107PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 homolog A-like [Nicot
JMSF031C16Sequence624007635 (9)ref|XP_009764531.1|6e-86PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 homolog A-like [Nicot605021498dbj|BAG16528.1|6e-29putative 26S proteasome subunit RPN2a [Capsicum chinense]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF031C16+ TCA
JMFS011E03+ ATTCCCTACGGTTGACAAAGTTGTGGGACACATTACTGCAATACATCAAAGCTGCATCA
JMFS069A01+ CATTACTGCAATACATCAAAGCTGCATCA
JMFS165G01+ CATTACTGCAATACATCAAAGCTGCATCA
JMFS017C03+ AGTTGTGGGACACATTACTGCAATACATCAAAGCTGCATCA
JMFS136D09+ GCATCA
JMFS065G10+ GACAAAGTTGTGGGACACATTACTGCAATACATCAAAGCTGCATCA
JMFS078B03+ GACAAAGTTGTGGGACACATTACTGCAATACATCAAAGCTGCATCA
                      ____________________________________________________________
consensus ATTCCCTACGGTTGACAAAGTTGTGGGACACATTACTGCAATACATCAAAGCTGCATCA
 
. : . : . : . : . : . :
JMSF031C16+ AGATTATCACTCCTTACAATTGCTTCTGCAACTTTATCTAACCTTCGGCACTCTATTGCC
JMFS011E03+ AGATTATCACTCCTTACAATTGCTTCTGCAACTTTATCTAACCTTCGGCACTCTATTGCC
JMFS069A01+ AGATTATCACTCCTTACAATTGCTTCTGCAACTTTATCTAACCTTCGGCACTCTATTGCC
JMFS165G01+ AGATTATCACTCCTTACAATTGCTTCTGCAACTTTATCTAACCTTCGGCACTCTATTGCC
JMFS017C03+ AGATTATCACTCCTTACAATTGCTTCTGCAACTTTATCTAACCTTCGGCACTCTATTGCC
JMFS136D09+ AGATTATCACTCCTTACAATTGCTTCTGCAACTTTATCTAACCTTCGGCACTCTATTGCC
JMFS065G10+ AGATTATCACTCCTTACAATTGCTTCTGCAACTTTATCTAACCTTCGGCACTCTATTGCC
JMFS078B03+ AGATTATCACTCCTTACAATTGCTTCTGCAACTTTATCTAACCTTCGGCACTCTATTGCC
                      ____________________________________________________________
consensus AGATTATCACTCCTTACAATTGCTTCTGCAACTTTATCTAACCTTCGGCACTCTATTGCC
 
. : . : . : . : . : . :
JMSF031C16+ ATTCCAATGGCTTGTTGATATTTTCCATCCACTATGCACTTATCAAGCATTCTCTCCACA
JMFS081D06+ TATGCACTTATCAAGCATTCTCTCCACA
JMFS011E03+ ATTCCAATGGCTTGTTGATATTTTCCATCCACTATGCACTTATCAAGCATTCTCTCCACA
JMFS069A01+ ATTCCAATGGCTTGTTGATATTTTCCATCCACTATGCACTTATCAAGCATTCTCTCCACA
JMFS165G01+ ATTCCAATGGCTTGTTGATATTTTCCATCCACTATGCACTTATCAAGCATTCTCTCCACA
JMFS017C03+ ATTCCAATGGCTTGTTGATATTTTCCATCCACTATGCACTTATCAAGCATTCTCTCCACA
JMFS136D09+ ATTCCAATGGCTTGTTGATATTTTCCATCCACTATGCACTTATCAAGCATTCTCTCCACA
JMFS065G10+ ATTCCAATGGCTTGTTGATATTTTCCATCCACTATGCACTTATCAAGCATTCTCTCCACA
JMFS078B03+ ATTCCAATGGCTTGTTGATATTTTCCATCCACTATGCACTTATCAAGCATTCTCTCCACA
                      ____________________________________________________________
consensus ATTCCAATGGCTTGTTGATATTTTCCATCCACTATGCACTTATCAAGCATTCTCTCCACA
 
. : . : . : . : . : . :
JMSF031C16+ ATGGCCTCCATCCTAGGATCCACNTCAGCTGCCTCATCATTTGACTCAGCAGCCTTAGTC
JMFS081D06+ ATGGCCTCCATCGTAGGATCCACATCAGTTGCATCATCATGTGACTCAGCAGCGTTAGTC
JMFS011E03+ ATGGCCTCCATCCTAGGATCCACATCAGCTGCCTCATCATTTGACTCAGCAGCCTTAGTC
JMFS069A01+ ATGGCCTCCATCCTAGGATCCACATCAGCTGCCTCATCATTTGACTCAGCAGCCTTAGTC
JMFS165G01+ ATGGCCTCCATCCTAGGATCCACATCAGCTGCCTCATCATTTGACTCAGCAGCCTTAGTC
JMFS017C03+ ATGGCCTCCATCCTAGGATCCACATCAGCTGCCTCATCATTTGACTCAGCAGCCTTAGTC
JMFS136D09+ ATGGCCTCCATCCTAGGATCCACATCAGCTGCCTCATCATTTGACTCAGCAGCCTTAGTC
JMFS065G10+ ATGGCCTCCATCCTAGGATCCACATCAGCTGCCTCATCATTTGACTCAGCAGCCTTAGTC
JMFS078B03+ ATGGCCTCCATCCTAGGATCCACATCAGCTGCCTCATCATTTGACTCAGCAGCCTTAGTC
                      ____________________________________________________________
consensus ATGGCCTCCATCCTAGGATCCACATCAGCTGCCTCATCATTTGACTCAGCAGCCTTAGTC
 
. : . : . : . : . : . :
JMSF031C16+ TTTCGACTAGCATATTCATCTAATGCTTTAGCGAGAAGNGTATGGACATAGTCAGACTCC
JMFS081D06+ TTTTGCCTAGCATATTCATCTAATGCTTTAGCGATAAGAGTATGGACATAGTCAGACTCC
JMFS011E03+ TTTCGACTAGCATATTCATCTAATGCTTTAGCGAGAAGAGTATGGACATAGTCAGACTCC
JMFS069A01+ TTTCGACTAGCATATTCATCTAATGCTTTAGCGAGAAGAGTATGGACATAGTCAGACTCC
JMFS165G01+ TTCCGACTAGCATATTCATCTAATGCTTTAGCGAGAAGAGTATGGACATAGTCAGACTCC
JMFS017C03+ TTTCGACTAGCATATTCATCTAATGCTTTAGCGAGAAGAGTATGGACATAGTCAGACTCC
JMFS136D09+ TTTCGACTAGCATATTCATCTAATGCTTTAGCGAGAAGAGTATGGACATAGTCAGACTCC
JMFS065G10+ TTTCGACTAGCATATTCATCTAATGCTTTAGCGAGAAGAGTATGGACATAGTCAGACTCC
JMFS078B03+ TTTCGACTAGCATATTCATCTAATGCTTTAGCGAGAAGAGTATGGACATAGTCAGACTCC
                      ____________________________________________________________
consensus TTTCGACTAGCATATTCATCTAATGCTTTAGCGAGAAGAGTATGGACATAGTCAGACTCC
 
. : . : . : . : . : . :
JMSF031C16+ TCAGAAACATCAAACAGAGGGCCGGCTCCAAGGGCATAAGATAATGAATCATTAAGATCT
JMFS081D06+ TCAGCAACATCTATCAGAGGGCCGGTTCCAAGGGCATAAGATAATGAATCATTAAGATCT
JMFS011E03+ TCAGAAACATCAAACAGAGGGCCGGCTCCAAGGGCATAAGATAATGAATCATTAAGATCT
JMFS069A01+ TCAGAAACATCAAACAGAGGGCCGGCTCCAAGGGCATAAGATAATGAATCATTAAGATCT
JMFS165G01+ TCAGAAACATCAAACAGAGGGCCGGCTCCAAGGGCATAAGATAATGAATCATTAAGATCT
JMFS017C03+ TCAGAAACATCAAACAGAGGGCCGGCTCCAAGGGCATAAGATAATGAATCATTAAGATCT
JMFS136D09+ TCAGAAACATCAAACAGAGGGCCGGCTCCAAGGGCATAAGATAATGAATCATTAAGATCT
JMFS065G10+ TCAGAAACATCAAACAGAGGGCCGGCTCCAAGGGCATAAGATAATGAATCATTAAGATCT
JMFS078B03+ TCAGAAACATCAAACAGAGGGCCGGCTCCAAGGGCATAAGATAATGAATCATTAAGATCT
                      ____________________________________________________________
consensus TCAGAAACATCAAACAGAGGGCCGGCTCCAAGGGCATAAGATAATGAATCATTAAGATCT
 
. : . : . : . : . : . :
JMSF031C16+ CCCAAATAATAGAACACCTTAGAAACAAGTAAGGCAGCAAGCTGTNTTTGATCAAATTCC
JMFS081D06+ CCCCAATAATAGAACGCCTTAGATTCAAGTAAGGCAGCAAGCTGTCTTTGATCAAATTCC
JMFS011E03+ CCCAAATAATAGAACACCTTAGAAACAAGTAAGGCAGCAAGCTGTCTTTGATCAAATTCC
JMFS069A01+ CCCAAATAATAGAACACCTTAGAAACAAGTAAGGCAGCAAGCTGTCTTTGATCAAATTCC
JMFS165G01+ CCCAAATAATAGAACACCTTAGAAACAAGTAAGGCAGCAAGCTGTCTTTGATCAAATTCC
JMFS017C03+ CCCAAATAATAGAACACCTTAGAAACAAGTAAGGCAGCAAGCTGTCTTTGATCAAATTCC
JMFS136D09+ CCCAAATAATAGAACACCTTAGAAACAAGTAAGGCAGCAAGCTGTCTTTGATCAAATTCC
JMFS065G10+ CCCAAATAATAGAACACCTTAGAAACAAGTAAGGCAGCAAGCTGTCTTTGATCAAATTCC
JMFS078B03+ CCCAAATAATAGAACACCTTAGAAACAAGTAAGGCAGCAAGCTGTCTTTGATCAAATTCC
                      ____________________________________________________________
consensus CCCAAATAATAGAACACCTTAGAAACAAGTAAGGCAGCAAGCTGTCTTTGATCAAATTCC
 
. : . : . : . : . : . :
JMSF031C16+ TCATCCTCATACAAACTTTCTATTACGGGGACGGATGTAGAGATCTCTGGCCAAAAATAA
JMFS081D06+ TCATCCTCATACAAACTGTGTAATGCGTGGACGGATGTAGAGATCTCTGGCCAAAAATAA
JMFS011E03+ TCATCCTCATACAAACTTTCTATTACGGGGACGGATGTAGAGATCTCTGGCCAAAAATAA
JMFS069A01+ TCATCCTCATACAAACTTTCTATTACGGGGACGGATGTAGAGATCTCTGGCCAAAAATAA
JMFS165G01+ TCATCCTCATACAAACTTTCTATTACGGGGACGGATGTAGAGATCTCTGGCCAAAAATAA
JMFS017C03+ TCATCCTCATACAAACTTTCTATTACGGGGACGGATGTAGAGATCTCTGGCCAAAAATAA
JMFS136D09+ TCATCCTCATACAAACTTTCTATTACGGGGACGGATGTAGAGATCTCTGGCCAAAAATAA
JMFS065G10+ TCATCCTCATACAAACTTTCTATTACGGGGACGGATGTAGAGATCTCTGGCCAAAAATAA
JMFS078B03+ TCATCCTCATACAAACTTTCTATTACGGGGACGGATGTAGAGATCTCTGGCCAAAAATAA
                      ____________________________________________________________
consensus TCATCCTCATACAAACTTTCTATTACGGGGACGGATGTAGAGATCTCTGGCCAAAAATAA
 
. : . : . : . : . : . :
JMSF031C16+ TCGACGAAGGCGTTGAGATTGGTGAGAGCGTGGAGTNTGAGGG---CGGGGTGAGTNTCG
JMFS081D06+ TCGACAAAGGCGTTGAGATTGGTGAAAGCATGGAGTTTGATGGATCGGGGCTGAGTCTCG
JMFS011E03+ TCGACGAAGGCGTTGAGATTGGTGAGAGCGTGGAGTTTGAGGG---CGGGGTGAGTCTCG
JMFS069A01+ TCGACGAAGGCGTTGAGATTGGTGAGAGCGTGGAGTTTGAGGG---CGGGGTGAGTCTCG
JMFS165G01+ TCGACGAAGGCGTTGAGATTGGTGAGAGCGTGGAGTTTGAGGG---CGGGGTGAGTCTCG
JMFS017C03+ TCGACGAAGGCGTTGAGATTGGTGAGAGCGTGGAGTTTGAGGG---CGGGGTGAGTCTCG
JMFS136D09+ TCGACGAAGGCGTTGAGATTGGTGAGAGCGTGGAGTTTGAGGG---CGGGGTGAGTCTCG
JMFS065G10+ TCGACGAAGGCGTTGAGATTGGTGAGAGCGTGGAGTTTGAGGG---CGGGGTGAGTCTCG
JMFS078B03+ TCGACGAAGGCGTTGAGATTGGTGAGAGCGTGGAGTTTGAGGG---CGGGGTGAGTCTCG
                      ____________________________________________________________
consensus TCGACGAAGGCGTTGAGATTGGTGAGAGCGTGGAGTTTGAGGG---CGGGGTGAGTCTCG
 
. : . : . : . : . : . :
JMSF031C16+ TTCAACATGGCCAATAGCCCTCCGGCGGAGGACACCATCG
JMFS081D06+ TTCAACATGGACAATAGCCCTCCGGCGGAGGACACCATCGCCGTGGAC
JMFS011E03+ TTCAACATGGCCAATAGCCCTCCGGCGGAGGACACCATCGCCGTGGACGCCATTGACCGC
JMFS069A01+ TTCAACATGGCCAATAGCCCTCCGGCGGAGGACACCATCGCCGTGGACGCCATTGACCGC
JMFS165G01+ TTCAACATGGCCAATAGCCCTCCGGCGGAGGACACCATCGCCGTGGACGCCATTGACCGC
JMFS017C03+ TTCAACATGGCCAATAGCCCTCCGGCGGAGGACACCATCGCCGTGGACGCCATTGACCGC
JMFS136D09+ TTCAACATGGCCAATAGCCCTCCGGCGGAGGACACCATCGCCGTGGACGCCATTGACCGC
JMFS065G10+ TTCAACATGGCCAATAGCCCTCCGGCGGAGGACACCATCGCCGTGGACGCCATTGACCGC
JMFS078B03+ TTCAACATGGCCAATAGCCCTCCGGCGGAGGACACCATCGCCGTGGACGCCATTGACCGC
                      ____________________________________________________________
consensus TTCAACATGGCCAATAGCCCTCCGGCGGAGGACACCATCGCCGTGGACGCCATTGACCGC
 
. : . : . : . : . : . :
JMFS011E03+ AAAAACTCAGAGATTGATATTCAA
JMFS069A01+ AAAAACTCAGAGATTGATATTCAAGGATCCGAAGAAAAGCAGAGCAAAGCTTA
JMFS165G01+ AAAAACTCAGAGATTGATATTCAAGGATCCGAAGAAAAGCAGAGCAAAGCTTATTC
JMFS017C03+ AAAAACTCAGAGATTGATATTCAAGG
JMFS136D09+ AAAAACTCAGAGATTGATATTCAAGGATCCGAAGAAAAGCAGAGCAAAGCTTATTCAGA
JMFS065G10+ AAAAACTCAGAGATTGATATTCAAGGATCCGAAGAAAAGCAGAGCAAAGCTTATTCAGA
JMFS078B03+ AAAAACTCAGAGATTGATATTCAAGGATCCGAAGAAAAGCAGAGCAAAGCTTATTCAGAC
                      ____________________________________________________________
consensus AAAAACTCAGAGATTGATATTCAAGGATCCGAAGAAAAGCAGAGCAAAGCTTATTCAGAC