Contig 007634:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN019P18Sequence619007634 (2)gb|KDP42085.1|6e-116hypothetical protein JCGZ_01873 [Jatropha curcas]
JMFS077H11Sequence634007634 (2)ref|XP_011089161.1|2e-131PREDICTED: mitochondrial dicarboxylate/tricarboxylate transporter DTC-like [Ses

Alignment

This contig is upended


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JMFN019P18+                                                        ACATGAGGAGCAATT
                      ____________________________________________________________
consensus                                                          ACATGAGGAGCAATT
 
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JMFN019P18+           CTAACACAGTATACGGGGAATCCAGTGTAAACTTAAAAGGCCCTCCCGCCTTGAGGGTTT
                      ____________________________________________________________
consensus             CTAACACAGTATACGGGGAATCCAGTGTAAACTTAAAAGGCCCTCCCGCCTTGAGGGTTT
 
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JMFN019P18+           GCATAGCACAGTCAACGGAACCGGTGTAGGGATATTTCCCAGCGGCATCTGGTTGCATCT
                      ____________________________________________________________
consensus             GCATAGCACAGTCAACGGAACCGGTGTAGGGATATTTCCCAGCGGCATCTGGTTGCATCT
 
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JMFN019P18+           TCTGGATTTGTGTCTTCACGTAGTCAAACGGTAAGCTGCAAGCAGCAGCGAAGAATCCGG
                      ____________________________________________________________
consensus             TCTGGATTTGTGTCTTCACGTAGTCAAACGGTAAGCTGCAAGCAGCAGCGAAGAATCCGG
 
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JMFN019P18+           ATACTGCACTAGCCCCTACAACTGTGGCAGTCTCTCCCATGCCAAGAGAATCCCGACAAA
JMFS077H11+                                              CCCATGCCAAGAGAATCCCGACAAA
                      ____________________________________________________________
consensus             ATACTGCACTAGCCCCTACAACTGTGGCAGTCTCTCCCATGCCAAGAGAATCCCGACAAA
 
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JMFN019P18+           ACTCAACACTTTGGTCATAAGAGGCGAGCATTCCCATGTTAAGCGCCATTGCCCTCACTA
JMFS077H11+           ACTCAACACTTTGGTCATAAGAGGCGAGCATTCCCATGTTAAGCGCCATTGCCCTCACTA
                      ____________________________________________________________
consensus             ACTCAACACTTTGGTCATAAGAGGCGAGCATTCCCATGTTAAGCGCCATTGCCCTCACTA
 
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JMFN019P18+           CAGTCGGGCCAGCGCCCTTCCAAAGGGCTAAAACTCCTTCATCAGCAACAATGCGGGACA
JMFS077H11+           CAGTCGGGCCAGCGCCCTTCCAAAGGGCTAAAACTCCTTCATCAGCAACAATGCGGGACA
                      ____________________________________________________________
consensus             CAGTCGGGCCAGCGCCCTTCCAAAGGGCTAAAACTCCTTCATCAGCAACAATGCGGGACA
 
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JMFN019P18+           GCGCATGGAAGGCATTTGTGTAGTTACGTCGCTGGGCGGCGGGTAAGGTGGCATCCGCCT
JMFS077H11+           GCGCATGGAAGGCATTTGTGTAGTTACGTCGCTGGGCGGCGGGTAAGGTGGCATCCGCCT
                      ____________________________________________________________
consensus             GCGCATGGAAGGCATTTGTGTAGTTACGTCGCTGGGCGGCGGGTAAGGTGGCATCCGCCT
 
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JMFN019P18+           GCATACGGATGAGTGCCAAATCAGCGGGACTGCCCACACAGGCTCCAATCGCCCCCGCAG
JMFS077H11+           GCATACGGATGAGTGCCAAATCAGCGGGACTGCCCACACAGGCTCCAATCGCCCCCGCAG
                      ____________________________________________________________
consensus             GCATACGGATGAGTGCCAAATCAGCGGGACTGCCCACACAGGCTCCAATCGCCCCCGCAG
 
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JMFN019P18+           TCAGCCCACACAGCGCCTTCTGATATAGAGGCAATGGCTTCCCGTCATTGGCTTCAATAG
JMFS077H11+           TCAGCCCACACAGCGCCTTCTGATATAGAGGCAATGGCTTCCCGTCATTGGCTTCAATAG
                      ____________________________________________________________
consensus             TCAGCCCACACAGCGCCTTCTGATATAGAGGCAATGGCTTCCCGTCATTGGCTTCAATAG
 
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JMFN019P18+           CCTTGGTCGTCAAAATTCTGAATGATCCAAGACGGGCAGTTGTATAAGTAGCCTGTCTAA
JMFS077H11+           CCTTGGTCGTCAAAATTCTGAATGATCCAAGACGGGCAGTTGTATAAGTAGCCTGTCTAA
                      ____________________________________________________________
consensus             CCTTGGTCGTCAAAATTCTGAATGATCCAAGACGGGCAGTTGTATAAGTAGCCTGTCTAA
 
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JMFN019P18+           G                                                           
JMFS077H11+           GAAGCCCAGCAGACAAACCCTTGTAAAAGGCACCAAAGCCCTCATTTTTAAGCATATTCT
                      ____________________________________________________________
consensus             GAAGCCCAGCAGACAAACCCTTGTAAAAGGCACCAAAGCCCTCATTTTTAAGCATATTCT
 
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JMFS077H11+           TGGTGACCTCGCCAGCTGATCCCTGGCCCAATTGGATTCTCACCTTGACCATGTCGATGG
                      ____________________________________________________________
consensus             TGGTGACCTCGCCAGCTGATCCCTGGCCCAATTGGATTCTCACCTTGACCATGTCGATGG
 
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JMFS077H11+           GTTGAATGACGCAGGTGGCGAGCATGCCGGAGCAACCGCCATTAACAAAGGGCTTCACGG
                      ____________________________________________________________
consensus             GTTGAATGACGCAGGTGGCGAGCATGCCGGAGCAACCGCCATTAACAAAGGGCTTCACGG
 
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JMFS077H11+           TGGGCCAGACGGCGGCGACGGGCTTGGGCTTCTCCTCTCCCATTCTTCCTGAGATTCCAA
                      ____________________________________________________________
consensus             TGGGCCAGACGGCGGCGACGGGCTTGGGCTTCTCCTCTCCCATTCTTCCTGAGATTCCAA