| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF013L21 | Sequence | 486 | 007632 (4) | ref|XP_002277767.1| | 6e-19 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 | 634 | 004170 (2) | ref|XP_009769471.1| | 8e-73 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 |
| JMFF015D15 | Sequence | 515 | 007632 (4) | ref|XP_002277767.1| | 2e-23 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 | |||||
| JMFF050O14 | Sequence | 634 | 007632 (4) | ref|XP_002277767.1| | 3e-37 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 | 561 | 004170 (2) | ref|XP_009618288.1| | 7e-53 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 |
| JMFS071F07 | Sequence | 642 | 007632 (4) | ref|XP_002277767.1| | 3e-26 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 | |||||
This contig is upended
. : . : . : . : . : . :
JMFF050O14+ CTGAACT
____________________________________________________________
consensus CTGAACT
. : . : . : . : . : . :
JMFF050O14+ TCTGCCAAACAACATTCGTGGATCGATCTAGCAGGACGAGGTTACCATCGTTGCCAAGAA
____________________________________________________________
consensus TCTGCCAAACAACATTCGTGGATCGATCTAGCAGGACGAGGTTACCATCGTTGCCAAGAA
. : . : . : . : . : . :
JMFF015D15+ TACTAGCAG
JMFF050O14+ CTGCAGATTCCACATCCGCATTGCTAGTATTGCTCGTCCAAACAATCTGCCTACTAGCAG
JMFS071F07+ CATTGCTAGTATTGCTCGTCCAAACAATCTGCCTACTAGCAG
____________________________________________________________
consensus CTGCAGATTCCACATCCGCATTGCTAGTATTGCTCGTCCAAACAATCTGCCTACTAGCAG
. : . : . : . : . : . :
JMFF015D15+ AATCAAACAACACCAATTCCCCTCGTCCAGTTAGCTCAAAATACGAATTACTCCCTACCC
JMFF013L21+ TCGTCCAGTTAGCTCAAAATACGAATTACTCCCTACCC
JMFF050O14+ AATCAAACAACACCAATTCCCCTCGTCCAGTTAGCTCAAAATACGAATTACTCCCTACCC
JMFS071F07+ AATCAAACAACACCAATTCCCCTCGTCCAGTTAGCTCAAAATACGAATTACTCCCTACCC
____________________________________________________________
consensus AATCAAACAACACCAATTCCCCTCGTCCAGTTAGCTCAAAATACGAATTACTCCCTACCC
. : . : . : . : . : . :
JMFF015D15+ TCCTACTAGCTCCCGCAAACCAAACAACCGTCTGTTCACAGTCCGGAACAGAACTCGAAT
JMFF013L21+ TCCTACTAGCTCCCGCAAACCAAACAACCGTCTGTTCACAGTCCGGAACAGAACTCGAAT
JMFF050O14+ TCCTACTAGCTCCCGCAAACCAAACAACCGTCTGTTCACAGTCCGGAACAGAACTCGAAT
JMFS071F07+ TCCTACTAGCTCCCGCAAACCAAACAACCGTCTGTTCACAGTCCGGAACAGAACTCGAAT
____________________________________________________________
consensus TCCTACTAGCTCCCGCAAACCAAACAACCGTCTGTTCACAGTCCGGAACAGAACTCGAAT
. : . : . : . : . : . :
JMFF015D15+ TGAATTTTATTCCAACACTATACTGACCACAATACTTAAAGAACCCAATCGCAAAATCCC
JMFF013L21+ TGAATTTTATTCCAACACTATACTGACCACAATACTTAAAGAACCCAATCGCAAAATCCC
JMFF050O14+ TGAATTTTATTCCAACACTATACTGACCACAATACTTAAAGAACCCAATCGCAAAATCCC
JMFS071F07+ TGAATTTTATTCCAACACTATACTGACCACAATACTTAAAGAACCCAATCGCAAAATCCC
____________________________________________________________
consensus TGAATTTTATTCCAACACTATACTGACCACAATACTTAAAGAACCCAATCGCAAAATCCC
. : . : . : . : . : . :
JMFF015D15+ CATTTTCGGAGGCCCAGAAACCGTTACCCCCAGACAGCCTGGAACCTAATGGAATCTTCG
JMFF013L21+ CATTTTCGGAGGCCCAGAAACCGTTACCCCCAGACAGCCTGGAACCTAATGGAATCTTCG
JMFF050O14+ CATTTTCGGAGGCCCAGAAACCGTTACCCCCAGACAGCCTGGAACCTAATGGAATCTTCG
JMFS071F07+ CATTTTCGGAGGCCCAGAAACCGTTACCCCCAGACAGCCTGGAACCTAATGGAATCTTCG
____________________________________________________________
consensus CATTTTCGGAGGCCCAGAAACCGTTACCCCCAGACAGCCTGGAACCTAATGGAATCTTCG
. : . : . : . : . : . :
JMFF015D15+ AGCACGCAACTGACAAGAACAAGAATCCAATCAAGATTGAACCGATGGCAATTCTCTCTA
JMFF013L21+ AGCACGCAACTGACAAGAACAAGAATCCAATCAAGATTGAACCGATGGCAATTCTCTCTA
JMFF050O14+ AGCACGCAACTGACAAGAACAAGAATCCAATCAAGATTGAACCGATGGCAATTCTCTCTA
JMFS071F07+ AGCACGCAACTGACAAGAACAAGAATCCAATCAAGATTGAACCGATGGCAATTCTCTCTA
____________________________________________________________
consensus AGCACGCAACTGACAAGAACAAGAATCCAATCAAGATTGAACCGATGGCAATTCTCTCTA
. : . : . : . : . : . :
JMFF015D15+ GTCTAAGCATATTTAAACAATCTTTAGCTTCTGCATATCAACAGCACATTCACTTATACA
JMFF013L21+ GTCTAAGCATATTTAAACAATCTTTAGCTTCTGCATATCAACAGCACATTCACTTATACA
JMFF050O14+ GTCTAAGCATATTTAAACAATCTTTAGCTTCTGCATATCAACAGCACATTCACTTATACA
JMFS071F07+ GTCTAAGCATATTTAAACAATCTTTAGCTTCTGCATATCAACAGCACATTCACTTATACA
____________________________________________________________
consensus GTCTAAGCATATTTAAACAATCTTTAGCTTCTGCATATCAACAGCACATTCACTTATACA
. : . : . : . : . : . :
JMFF015D15+ CCATGAAAACGCACCAACCGAATTGCCATCTGTTACTGCTCCCAGTACCCGACAACGATT
JMFF013L21+ CCATGAAAACGCACCAACCGAATTGCCATCTGTTACTGCTCCCAGTACCCGACAACGATT
JMFF050O14+ CCATGAAAACGCACCAACCGAATTGCCATCTGTTACTGCTCCCAGTACCCGACAACGATT
JMFS071F07+ CCATGAAAACGCACCAACCGAATTGCCATCTGTTACTGCTCCCAGTACCCGACAACGATT
____________________________________________________________
consensus CCATGAAAACGCACCAACCGAATTGCCATCTGTTACTGCTCCCAGTACCCGACAACGATT
. : . : . : . : . : . :
JMFF015D15+ TGGAAAAACCGGAAAACCAAGAAGTAGCCAAGACTGGAAAGCAGACATGCATTCAGAAGG
JMFF013L21+ TGGAAAAACCGGAAAACCAAGAAGTAGCCAAGACTGGAAAGCAGACATGCATTCAGAAGG
JMFF050O14+ TGGAAAAACCGGAAAACCAAGAAGTAGCCAAGACTGGAAAGCAGACATGCATTCAGAAGG
JMFS071F07+ TGGAAAAACCGGAAAACCAAGAAGTAGCCAAGACTGGAAAGCAGACATGCATTCAGAAGG
____________________________________________________________
consensus TGGAAAAACCGGAAAACCAAGAAGTAGCCAAGACTGGAAAGCAGACATGCATTCAGAAGG
. : . : . : . : . : . :
JMFF015D15+ CTAGAGCTAAAAGAACCAACAAAGCT
JMFF013L21+ CTAGAGCTAAAAGAACCAACAAAGCT
JMFF050O14+ CTAGAGCTAAAAGAACCAACAAAGCT
JMFS071F07+ CTAGAGCTAAAAGAACCAACAAAGCTGTGAACTCCTGCTGGAAAGAGCAACTGTTAACCT
____________________________________________________________
consensus CTAGAGCTAAAAGAACCAACAAAGCTGTGAACTCCTGCTGGAAAGAGCAACTGTTAACCT
. : . : . : . : . : . :
JMFS071F07+ TATTTTCTTGTCTGAAACCCAGCATGAGAGAACCTAAGCAAACCAAAAGGTGGAGAACAC
____________________________________________________________
consensus TATTTTCTTGTCTGAAACCCAGCATGAGAGAACCTAAGCAAACCAAAAGGTGGAGAACAC