| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF043K10 | Sequence | 579 | 007621 (6) | ref|XP_009605196.1| | 1e-86 | PREDICTED: PCTP-like protein [Nicotiana tomentosiformis] | 573 | 007621 (6) | ref|XP_009605196.1| | 1e-86 | PREDICTED: PCTP-like protein [Nicotiana tomentosiformis] |
| JMFN005J08 | Sequence | 627 | 007621 (6) | ref|XP_009605196.1| | 4e-127 | PREDICTED: PCTP-like protein [Nicotiana tomentosiformis] | |||||
| JMFS064C11 | Sequence | 627 | 007621 (6) | ref|XP_009605196.1| | 2e-79 | PREDICTED: PCTP-like protein [Nicotiana tomentosiformis] | |||||
| JMSF023E15 | Sequence | 675 | 007621 (6) | ref|XP_009605196.1| | 1e-91 | PREDICTED: PCTP-like protein [Nicotiana tomentosiformis] | 707 | 007621 (6) | emb|CBI29613.3| | 5e-85 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMSF023E15- TTTTTACTTTGGANATGGTAGNTGAGATCCCACCAAAGAT
____________________________________________________________
consensus TTTTTACTTTGGANATGGTAGNTGAGATCCCACCAAAGAT
. : . : . : . : . : . :
rJMSF023E15- TAGACCATTGCCAAGATTGCAATTATATTGTCTGCCAACTTTGGGACAGTGCATGGACAC
____________________________________________________________
consensus TAGACCATTGCCAAGATTGCAATTATATTGTCTGCCAACTTTGGGACAGTGCATGGACAC
. : . : . : . : . : . :
rJMSF023E15- AACTTTGGAAGCTATTACTAATTATATTTAAAAGTAACATTTAAATATGTTTTACTTTTT
____________________________________________________________
consensus AACTTTGGAAGCTATTACTAATTATATTTAAAAGTAACATTTAAATATGTTTTACTTTTT
. : . : . : . : . : . :
rJMSF023E15- GATTGATATGTATTTAACTATAATAATCATATCNGATTTCTTCATCATATCATATAAAAT
____________________________________________________________
consensus GATTGATATGTATTTAACTATAATAATCATATCNGATTTCTTCATCATATCATATAAAAT
. : . : . : . : . : . :
rJMSF023E15- ATATTAGTTTCCTTTGCGTTTGTACAGTAGCAATAATCATGAATCATGTTCAACAACATT
____________________________________________________________
consensus ATATTAGTTTCCTTTGCGTTTGTACAGTAGCAATAATCATGAATCATGTTCAACAACATT
. : . : . : . : . : . :
rJMSF023E15- GGTGGGACAAGCCAGCACTTGCTTTTTAAGGTTTTCAATTATCATANCCAATTTTGTATT
____________________________________________________________
consensus GGTGGGACAAGCCAGCACTTGCTTTTTAAGGTTTTCAATTATCATANCCAATTTTGTATT
. : . : . : . : . : . :
rJMSF023E15- CAGTCTATTCACGAAGCACTTGGGCAGCCATCCTGCTGGGTCTAGCTGAACAACGTAAGT
JMFN005J08+ CAGCCATCCTGCTGGGTCTAGCTGAACAACGTAAGT
____________________________________________________________
consensus CAGTCTATTCACGAAGCACTTGGGCAGCCATCCTGCTGGGTCTAGCTGAACAACGTAAGT
. : . : . : . : . : . :
rJMSF023E15- GACCATGCAAGAGTGGTCGGAAAGTTTCTCAACCACCCAGCCTGACTGCAACAGNAGGCC
JMFN005J08+ GACCATGCAAGAGTGGTCGGAAAGTTTCTCAACCACCCAGCCTGACTGCAACAGTAGGCC
____________________________________________________________
consensus GACCATGCAAGAGTGGTCGGAAAGTTTCTCAACCACCCAGCCTGACTGCAACAGTAGGCC
. : . : . : . : . : . :
rJMSF023E15- TCGGATTGCATTGTTTTGCTTTGGCTGCAATCCTGCTGCTATCTCTTTTGGAAGAGAAGC
JMFN005J08+ TCGGATTGCATTGTTTTGCTTTGGCTGCAATCCTGCTGCTATCTCTTTTGGAAGAGAAGC
____________________________________________________________
consensus TCGGATTGCATTGTTTTGCTTTGGCTGCAATCCTGCTGCTATCTCTTTTGGAAGAGAAGC
. : . : . : . : . : . :
rJMSF023E15- CACTGCTACTACCNAAGTTCCATCNTCCATATTTTCACGTCGCTCGTAGACAATAAATTC
JMFN005J08+ CACTGCTACTACCAAAGTTCCATCATCCATATTTTCACGTCGCTCGTAGACAATAAATTC
rJMFF043K10- TACCAAAGTTCCATCATCCATATTTTCACGTCGCTCGTAGACAATAAATTC
JMFF043K10+ TACCAAAGTTCCATCATCCATATTTTCACGTCGCTCGTAGACAATAAATTC
JMSF023E15+ TACCAAAGTTCCATCATCCATATTTTCACGTCGCTCGTAGACAATAAATTC
JMFS064C11+ TTCACGTCGCTCGTAGAAAATAAATTC
____________________________________________________________
consensus CACTGCTACTACCAAAGTTCCATCATCCATATTTTCACGTCGCTCGTAGACAATAAATTC
. : . : . : . : . : . :
rJMSF023E15- TCTGTTTCGAAAAAGAGGCTTAGAGCTGTCTCCAAACCTAAGGCGTATGATGCTTAAGTT
JMFN005J08+ TCTGTTTCGAAAAAGAGGCTTAGAGCTGTCTCCAAACCTAAGGCGTATGATGCTTAGGTT
rJMFF043K10- TCTGTTTCGAAAAAGAGGCTTAGAGCTGTCTCCAAACCTAAGGCGTATGATGCTTAGGTT
JMFF043K10+ TCTGTTTCGAAAAAGAGGCTTAGAGCTGTCTCCAAACCTAAGGCGTATGATGCTTAGGTT
JMSF023E15+ TCTGTTTCGAAAAAGAGGCTTAGAGCTGTCTCCAAACCTAAGGCGTATGATGCTTAGGTT
JMFS064C11+ TCTGTTTCGAAAAAGAGGCTTAGAGCTGTCTCCAAACCTAAGGCGTATGATGCTTAGGTT
____________________________________________________________
consensus TCTGTTTCGAAAAAGAGGCTTAGAGCTGTCTCCAAACCTAAGGCGTATGATGCTTAGGTT
. : . : . : . : . : . :
rJMSF023E15- ATCTTCGAGATCTTTAATGTATTTGGCTTCTACAAGGTCGCGGTCCCATTGCCTTGCAGN
JMFN005J08+ ATCTTCGAGATCTTTAATGTATTTGGCTTCTACAAGGTCGCGGTCCCATTGCCTTGCAGC
rJMFF043K10- ATCTTCGAGATCTTTAATGTATTTGGCTTCTACAAGGTCGCGGTCCCATTGCCTTGCAGC
JMFF043K10+ ATCTTCGAGATCTTTAATGTATTTGGCTTCTACAAGGTCGCGGTCCCATTGCCTTGCAGC
JMSF023E15+ ATCTTCGAGATCTTTAATGTATTTGGCTTCTACAAGGTCGCGGTCCCATTGCCTTGCAGC
JMFS064C11+ ATCTTCGAGATCTTTAATGTATTTGGCTTCTACAAGGTCGCGGTCCCATTGCCTTGCAGC
____________________________________________________________
consensus ATCTTCGAGATCTTTAATGTATTTGGCTTCTACAAGGTCGCGGTCCCATTGCCTTGCAGC
. : . : . : . : . : . :
rJMSF023E15- ATCGATG
JMFN005J08+ ATCGATGGCATTAGCTACAGTCATGAACTGTTGAGGAGAGACAGAATTTAGCAGCCAACG
rJMFF043K10- ATCGATGGCATTAGCTACAGTCATGAACTGTTGAGGAGAGACAGAATTTAGCAGCCAACG
JMFF043K10+ ATCGATGGCATTAGCTACAGTCATGAACTGTTGAGGAGAGACAGAATTTAGCAGCCAACG
JMSF023E15+ ATCGATGGCATTAGCTACAGTCATGAACTGTTGAGGAGAGACAGAATTTAGCAGCCAACG
JMFS064C11+ ATCGATGGCATTAGCTACAGTCATGAACTGTTGAGGAGAGACAGAATTTAGCAGCCAACG
____________________________________________________________
consensus ATCGATGGCATTAGCTACAGTCATGAACTGTTGAGGAGAGACAGAATTTAGCAGCCAACG
. : . : . : . : . : . :
JMFN005J08+ GCTCCGGAAAGTATGAAGCGAACCTGTCCGGCGTTTCGATATCTCGACGCCGCCGTTATC
rJMFF043K10- GCTCCGGAAAGTATGAAGCGAACCTGTCCGGCGTTTCGATATCTCGACGCCGCCGTTATC
JMFF043K10+ GCTCCGGAAAGTATGAAGCGAACCTGTCCGGCGTTTCGATATCTCGACGCCGCCGTTATC
JMSF023E15+ GCTCCGGAAAGTATGAAGCGAACCTGTCCGGCGTTTCGATATCTCGACGCCGCCGTTATC
JMFS064C11+ GCTCCGGAAAGTATGAAGCGAACCTGTCCGGCGTTTCGATATCTCGACGCCGCCGTTATC
____________________________________________________________
consensus GCTCCGGAAAGTATGAAGCGAACCTGTCCGGCGTTTCGATATCTCGACGCCGCCGTTATC
. : . : . : . : . : . :
JMFN005J08+ TATGGCCAATATTTTCCATCCGCGGTCGCCGGAGTCCGACGCCGACAGCAACTCCTGGAT
rJMFF043K10- TATGGCCAATATTTTCCATCCGCGGTCGCCGGAGTCCGACGCCGACAGCAACTCCTGGAT
JMFF043K10+ TATGGCCAATATTTTCCATCCGCGGTCGCCGGAGTCCGACGCCGACAGCAACTCCTGGAT
JMSF023E15+ TATGGCCAATATTTTCCATCCGCGGTCGCCGGAGTCCGACGCCGACAGCAACTCCTGGAT
JMFS064C11+ TATGGCCAATATTTTCCATCCGCGGTCGCCGGAGTCCGACGCCGACAGCAACTCCTGGAT
____________________________________________________________
consensus TATGGCCAATATTTTCCATCCGCGGTCGCCGGAGTCCGACGCCGACAGCAACTCCTGGAT
. : . : . : . : . : . :
JMFN005J08+ GCAATTCTCACTTGCATGGAACACATATCTCCTCAACGAATCCTCACTAATCGACCATGA
rJMFF043K10- GCAATTCTCACTTGCATGGAACACATATCTCCTCAACGAATCCTCACTAATCGACCATGA
JMFF043K10+ GCAATTCTCACTTGCATGGAACACATATCTCCTCAACGAATCCTCACTAATCGACCATGA
JMSF023E15+ GCAATTCTCACTTGCATGGAACACATATCTCCTCAACGAATCCTCACTAATCGACCATGA
JMFS064C11+ GCAATTCTCACTTGCATGGAACACATATCTCCTCAACGAATCCTCACTAATCGACCATGA
____________________________________________________________
consensus GCAATTCTCACTTGCATGGAACACATATCTCCTCAACGAATCCTCACTAATCGACCATGA
. : . : . : . : . : . :
JMFN005J08+ TCTAGTACAAGGTGCTGGACTTATTGTACTACTCATCCTGGAGATTTCTTG
rJMFF043K10- TCTAGTACAAGGTGCTGGACTTATTGTACTACTCATCCTGGAGATTTCTTGGGAGAATTT
JMFF043K10+ TCTAGTACAAGGTGCTGGACTTATTGTACTACTCATCCTGGAGATTTCTTGGGAGAATTT
JMSF023E15+ TCTAGTACAAGGTGCTGGACTTATTGTACTACTCATCCTGGAGATTTCTTGGGAGAATTT
JMFS064C11+ TCTAGTACAAGGTGCTGGACTTATTGTACTACTCATCCTGGAGATTTCTTGGGAGAATTT
____________________________________________________________
consensus TCTAGTACAAGGTGCTGGACTTATTGTACTACTCATCCTGGAGATTTCTTGGGAGAATTT
. : . : . : . : . : . :
rJMFF043K10- GATTAATTGTTATCCTAAAACAT
JMFF043K10+ GATTAATTGTTATCCTAAAACAT
JMSF023E15+ GATTAATTGTTATCCTAAAACATAGGAACAAAGAAAGGGAGAAGAATGAATATATAATGG
JMFS064C11+ GATTAATTGTTATCCTAAAACATAGGAACAAAGAAAGGGAGAAGAATGAATATATAATGG
____________________________________________________________
consensus GATTAATTGTTATCCTAAAACATAGGAACAAAGAAAGGGAGAAGAATGAATATATAATGG
. : . : . : . : . : . :
JMSF023E15+ GAAGTGAAAGTAGTAGAATTGGTATTAGATTGTTTTTGTAGAATAATAGGAAGTGGGAGG
JMFS064C11+ GAAGTGAAAGTAGTAGAATTGGTATTAGATTGTTTTTGTAGAATAATAGGAAGTGGGAGG
____________________________________________________________
consensus GAAGTGAAAGTAGTAGAATTGGTATTAGATTGTTTTTGTAGAATAATAGGAAGTGGGAGG
. : . : . : . : . : . :
JMSF023E15+ AGTTGATTGAAGCACATGGAATGCCAGAAGAACTCCC
JMFS064C11+ AGTTGATTGAAGCACATGGAATGCCAGAAGAACTCCCATGATTACAACTGCAACAACTCA
____________________________________________________________
consensus AGTTGATTGAAGCACATGGAATGCCAGAAGAACTCCCATGATTACAACTGCAACAACTCA