Contig 007620:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001O22Sequence490007653 (11)ref|XP_009606207.1|9e-50PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 [Nicotiana 221007620 (7)emb|CDP13064.1|6e-28unnamed protein product [Coffea canephora]
JMFF010D02Sequence520007653 (11)ref|XP_009788524.1|2e-74PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 [Nicotiana 704007620 (7)emb|CDP13064.1|1e-125unnamed protein product [Coffea canephora]
JMFF011B18Sequence539000204 (2)gb|AJO70167.1|5e-113alpha,alpha-trehalose-phosphate synthase 5 [Camellia sinensis]779007620 (7)emb|CDP13064.1|1e-144unnamed protein product [Coffea canephora]
JMFF036C09Sequence579000204 (2)gb|AJO70167.1|6e-121alpha,alpha-trehalose-phosphate synthase 5 [Camellia sinensis]696007620 (7)emb|CDP13064.1|1e-130unnamed protein product [Coffea canephora]
JMFS034F02Sequence625007620 (7)ref|XP_009788524.1|2e-124PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 [Nicotiana
JMFS062C08Sequence501007620 (7)ref|XP_011028143.1|7e-55PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5-like isofor
JMSF002O09Sequence233007653 (11)ref|XP_009788524.1|1e-13PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 [Nicotiana 682007620 (7)emb|CDP13064.1|1e-126unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS034F02-                        GGGCTGCAGGCCGACCACGCCAAAAAAGAGCATGCTGGTGGTATCAG
                      ____________________________________________________________
consensus                          GGGCTGCAGGCCGACCACGCCAAAAAAGAGCATGCTGGTGGTATCAG
 
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JMFS034F02-           AGTTCATCGGGTGCTCCCCGTCGCTTAGTGGTGCAATTAGAGTCAACCCGTGGAATATCG
                      ____________________________________________________________
consensus             AGTTCATCGGGTGCTCCCCGTCGCTTAGTGGTGCAATTAGAGTCAACCCGTGGAATATCG
 
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JMFS034F02-           ATGCAGTCGCTGAGGCAATGGATTCCGCTTTGGTTGTTTCCGAGCCCGAGAAACAGATGA
                      ____________________________________________________________
consensus             ATGCAGTCGCTGAGGCAATGGATTCCGCTTTGGTTGTTTCCGAGCCCGAGAAACAGATGA
 
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JMFS034F02-           GGCACGAGAAACATTACAAGTATGTGAGCACTCACGACGTCGCGTATTGGGCACATAGCT
                      ____________________________________________________________
consensus             GGCACGAGAAACATTACAAGTATGTGAGCACTCACGACGTCGCGTATTGGGCACATAGCT
 
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JMFS034F02-           TTATGCAGGACCTCGACCGAGCCTGCGGGGATCACGTGAAGAGAAGGTGTTGGGGTATCG
                      ____________________________________________________________
consensus             TTATGCAGGACCTCGACCGAGCCTGCGGGGATCACGTGAAGAGAAGGTGTTGGGGTATCG
 
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JMFS034F02-           GGTTTGGCTTAGGCTTTCGAGTAATCGCCTTGGACCCTAGCTTCAGGAAGCTATCGGTTG
                      ____________________________________________________________
consensus             GGTTTGGCTTAGGCTTTCGAGTAATCGCCTTGGACCCTAGCTTCAGGAAGCTATCGGTTG
 
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JMFS034F02-           AGCATATTGTGTCTGCTTACAAAAGGACCAAACACCGGGCAATTCTTTTGGACTACGATG
                      ____________________________________________________________
consensus             AGCATATTGTGTCTGCTTACAAAAGGACCAAACACCGGGCAATTCTTTTGGACTACGATG
 
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JMFS034F02-           GTGCTATGACACTCCCGAATTCTATCAGCAAGGGTCCCAATGACGAGGCTGTTGGTATCC
rJMFF011B18+                                  TCAGCAAGGGTCCCAATGACGAGGCTGTTGGTATCN
                      ____________________________________________________________
consensus             GTGCTATGACACTCCCGAATTCTATCAGCAAGGGTCCCAATGACGAGGCTGTTGGTATCC
 
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JMFS034F02-           TAAATAACTTGTGCAAGGATCCCAAGAACGTCGTTTTCCTCGTTAGT-GGAAAAGACAGA
rJMFF036C09+                                                          GGAAAAGACAGA
rJMFF010D02+                                                          GGAAAAGACAGA
rJMSF002O09+                              CCCAAGAACGTCGTTTTCCTCGTTAGTGGGAAAAGACAGA
rJMFF011B18+          TAAATAACTTGTGCAAGGATCCCAAGAACGTCGTTTTCCTCGTTAGT-GGAAAAGACAGA
                      ____________________________________________________________
consensus             TAAATAACTTGTGCAAGGATCCCAAGAACGTCGTTTTCCTCGTTAGT-GGAAAAGACAGA
 
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JMFS034F02-           CAGACTTTAACT-CAATGGTTTTCCTCAAGTGAAAATTTGGGACTTGCAGCCGAGCATGG
rJMFF036C09+          CAGNCTTTAACT-CAATGGTTTTCCTCAAGTGAAAATTTGGGACTTGCAGCCGAGCATGG
rJMFF010D02+          CAGACTTTAACTCCAATGGTTTTCNTCAAGTGAAAATTTGGGACTTGCAGCCGAGCATGG
rJMSF002O09+          CAGACTTTAACT-CAATGGTTTTCCTCAAGTGAAAATTTGGGACTTGCAGCCGAGCATGG
rJMFF011B18+          CAGACTTTAACT-CAATGGTTTTCCTCAAGTGAAAATTTGGGACTTGCAGCCGAGCATGG
                      ____________________________________________________________
consensus             CAGACTTTAACT-CAATGGTTTTCCTCAAGTGAAAATTTGGGACTTGCAGCCGAGCATGG
 
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JMFS034F02-           ATATTTTGTTCGGCCAAGTCGGAATGCAGAATGGGAAACT                    
rJMFF036C09+          ATATTTTGTTCGGCCAAGTCGGAATGCAGAATGGGAAACTTCTATTGCGGTGCCAGATTT
rJMFF010D02+          ATATTTTGTTCGGCCAAGTCGGAATGCAGAATGGGAAACTTCTATTGCGGTGCCAGATTT
rJMSF002O09+          ATATTTTGTTCGGCCAAGTCGGAATGCAGAATGGGAAACTTCTATTGCGGTGCCAGATTT
rJMFF011B18+          ATATTTTGTTCGGCCAAGTCGGAATGCAGAATGGGAAACTTCTATTGCGGTGCCAGATTT
                      ____________________________________________________________
consensus             ATATTTTGTTCGGCCAAGTCGGAATGCAGAATGGGAAACTTCTATTGCGGTGCCAGATTT
 
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rJMFF036C09+          CTACTGGAAGCAAATTGCTGAACCCGTAATGGGACTCTACACGGAGACAACTGATGGTTC
rJMFF010D02+          CTACTGGAAGCAAATTGCTGAACCCGTAATGGGACTCTACACGGAGACAACTGATGGTTC
rJMSF002O09+          CTACTGGAAGCAAATTGCTGAACCCGTAATGGGACTCTACACGGAGACAACTGATGGTTC
rJMFF011B18+          CTACTGGAAGCAAATTGCTGAACCCGTAATGGGACTCTACACGGAGACAACTGATGGTTC
                      ____________________________________________________________
consensus             CTACTGGAAGCAAATTGCTGAACCCGTAATGGGACTCTACACGGAGACAACTGATGGTTC
 
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rJMFF036C09+          TTTTATCGAGACCAAGGACAGTGCCCTCGTTTGGAATTACCAATATGCAGATCGGGATTT
rJMFF010D02+          TTTTATCGAGACCAAGGACAGTGCCCTCGTTTGGAATTACCAATATGCAGATCGGGATTT
rJMSF002O09+          TTTTATCGAGACCAAGGACAGTGCCCTCGTTTGGAATTACCAATATGCAGATCGGGATTT
rJMFF011B18+          TTTTATCGAGACCAAGGACAGTGCCCTCGTTTGGAATTACCAATATGCAGATCGGGATTT
                      ____________________________________________________________
consensus             TTTTATCGAGACCAAGGACAGTGCCCTCGTTTGGAATTACCAATATGCAGATCGGGATTT
 
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rJMFF036C09+          TGGGTCGTGTCAAGCCAAGGAGCTCCAAGATCACCTCGAAAGTGTTCTTGCTAACGAGCC
rJMFF001O22+                                                                    CC
rJMFF010D02+          TGGGTCGTGTCAAGCCAAGGAGCTCCAAGATCACCTCGAAAGTGTTCTTGCTAACGAGCC
rJMSF002O09+          TGGGTCGTGTCAAGCCAAGGAGCTCCAAGATCACCTCGAAAGTGTTCTTGCTAACGAGCC
rJMFF011B18+          TGGGTCGTGTCAAGCCAAGGAGCTCCAAGATCACCTCGAAAGTGTTCTTGCTAACGAGCC
                      ____________________________________________________________
consensus             TGGGTCGTGTCAAGCCAAGGAGCTCCAAGATCACCTCGAAAGTGTTCTTGCTAACGAGCC
 
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rJMFF036C09+          TGTTTCTGTCAAGAGTGGCCCGCTTATTGTCGAGGTTAAGCCTCAGGGCGTGAACAAAGG
rJMFF001O22+          TGTTTCTGTCAAGAGTGGCCCGCTTATTGTCGAGGTTAAGCCTCAGGGCGTGAACAAAGG
rJMFF010D02+          TGTTTCTGTCAAGAGTGGCCCGCTTATTGTCGAGGTTAAGCCTCAGGGCGTGAACAAAGG
rJMSF002O09+          TGTTTCTGTCAAGAGTGGCCCGCTTATTGTCGAGGTTAAGCCTCAGGGCGTGAACAAAGG
rJMFF011B18+          TGTTTCTGTCAAGAGTGGCCCGCTTATTGTCGAGGTTAAGCCTCAGGGCGTGAACAAAGG
JMFS062C08+                                       GTCGAGGTTAAGCCTCAGGGCGTGAACAAAGG
                      ____________________________________________________________
consensus             TGTTTCTGTCAAGAGTGGCCCGCTTATTGTCGAGGTTAAGCCTCAGGGCGTGAACAAAGG
 
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rJMFF036C09+          TCTCGTGGCAGAACGACTGCTAGCGATGATGAAGCAGAAGGATATGGTGCCCGATTTCGT
rJMFF001O22+          TCTCGTGGCAGAACGAGTGCTAGNGATGANGAAGCAGAAGGATATGGTGCCCGATTTCGT
rJMFF010D02+          TCTCGTGGCAGAACGACTGCTAGCGATGATGAAGCAGAAGGATATGGTGCCCGATTTCGT
rJMSF002O09+          TCTCGTGGCAGAACGACTGCTAGCGATGATGAAGCAGAAGGATATGGTGCCCGATTTCGT
rJMFF011B18+          TCTCGTGGCAGAACGACTGCTAGCGATGATGAAGCAGAAGGATATGGTGCCCGATTTCGT
JMFS062C08+           TCTCGTGGCAGAACGACTGCTAGCGATGATGAAGCAGAAGGATATGGTGCCCGATTTCGT
                      ____________________________________________________________
consensus             TCTCGTGGCAGAACGACTGCTAGCGATGATGAAGCAGAAGGATATGGTGCCCGATTTCGT
 
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rJMFF036C09+          GCTGTGCATCGGGGATGACAGGTCAGACGAGGATATATTCGAGGTGATAATGAGTGCGGT
rJMFF001O22+          GCTGTGCATCGGGGATGACAGGTCAGANGAGGATATATTTGAGGTGATAATGAGNGCGGT
rJMFF010D02+          GCTGTGCATCGGGGATGACAGGTCAGACGAGGATATATTCGAGGTGATAATGAGTGCGGT
rJMSF002O09+          GCTGTGCATCGGGGATGACAGGTCAGACGAGGATATATTCGAGGTGATAATGAGTGCGGT
rJMFF011B18+          GCTGTGCATCGGGGATGACAGGTCAGACGAGGATATATTCGAGGTGATAATGAGTGCGGT
JMFS062C08+           GCTGTGCATCGGGGATGACAGGTCAGACGAGGATATATTCGAGGTGATAATGAGTGCGGT
                      ____________________________________________________________
consensus             GCTGTGCATCGGGGATGACAGGTCAGACGAGGATATATTCGAGGTGATAATGAGTGCGGT
 
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rJMFF036C09+          GGCTCAAGAATCGCTGTCCCCGGTTGCTGAAGTGTTCGCTTGCACAGTCGGGCAGAAGCC
rJMFF001O22+          GGCTCAAGAATCGNNGTCCCCGGTTGCTGAAGTGTT                        
rJMFF010D02+          GGCTCAAGAATCGCTGTCCCCGGTTGCTGAAGTGTTCGCTTGCACAGTCGGGCAGAAGCC
rJMSF002O09+          GGCTCAAGAATCGCTGTCCCCGGTTGCTGAAGTGTTCGCTTGCACAGTCGGGCAGAAGCC
rJMFF011B18+          GGCTCAAGAATCGCTGTCCCCGGTTGCTGAAGTGTTCGCTTGCACAGTCGGGCAGAAGCC
JMFS062C08+           GGCTCAAGAATCGCTGTCCCCGGTTGCTGAAGTGTTCGCTTGCACAGTCGGGCAGAAGCC
                      ____________________________________________________________
consensus             GGCTCAAGAATCGCTGTCCCCGGTTGCTGAAGTGTTCGCTTGCACAGTCGGGCAGAAGCC
 
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rJMFF036C09+          CAGCAAGGCGAAGTATTACCTCGACGACACCTCTGAGATCCTGAGGATGTTGCAGGGCCT
rJMFF010D02+          CAGCAAGGCGAAGTATTACCTCGACGACACCTCTGAGATCCTGAGGATGTTGCAGGGCCT
rJMSF002O09+          CAGCAAGGCGAAGTATTACCTCGACGACACCTCTGAGATCCTGAGGATGTTGCAGGGCCT
rJMFF011B18+          CAGCAAGGCGAAGTATTACCTCGACGACACCTCTGAGATCCTGAGGATGTTGCAGGGCCT
JMFS062C08+           CAGCAAGGCGAAGTATTACCTCGACGACACCTCTGAGATCCTGAGGATGTTGCAGGGCCT
                      ____________________________________________________________
consensus             CAGCAAGGCGAAGTATTACCTCGACGACACCTCTGAGATCCTGAGGATGTTGCAGGGCCT
 
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rJMFF036C09+          CGCGACTGCTTCTGAGCAATCTGCTCGACCCACTCCCCGCTCTTCTCAGCAGGTTATCAT
rJMFF010D02+          CGCGACTGCTTCTGAGCAATCTGCTCGACCCACTCCCCGCTCTTCTCAGCAGGTTATCAT
rJMSF002O09+          CGCGACTGCTTCTGAGCAATCTGCTCGACCCACTCCCCGCTCT                 
rJMFF011B18+          CGCGACTGCTTCTGAGCAATCTGCTCGACCCACTCCCCGCTCTTCTCAGCAGGTTATCAT
JMFS062C08+           CGCGACTGCTTCTGAGCAATCTGCTCGACCCACTCCCCGCTCTTCTCAGCAGGTTATCAT
                      ____________________________________________________________
consensus             CGCGACTGCTTCTGAGCAATCTGCTCGACCCACTCCCCGCTCTTCTCAGCAGGTTATCAT
 
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rJMFF036C09+          TGACAGAGAATAGCGCCCGAGA                                      
rJMFF010D02+          TGACAGAGAATAGCGCCCGAGA                                      
rJMFF011B18+          TGACAGAGAATAGCGCCCGAGA                                      
JMFS062C08+           TGACAGAGAATAGCGCCCGAGAAATTAAAGAACAGAAAAAAAAAAAAAAAAAACTCGAGA
                      ____________________________________________________________
consensus             TGACAGAGAATAGCGCCCGAGAAATTAAAGAACAGAAAAAAAAAAAAAAAAAACTCGAGA