Contig 007618:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS059B10Sequence621007618 (3)ref|XP_009628623.1|5e-50PREDICTED: uncharacterized protein LOC104118935 isoform X3 [Nicotiana tomentosi
JMFS106B08Sequence618007618 (3)ref|XP_009628623.1|3e-51PREDICTED: uncharacterized protein LOC104118935 isoform X3 [Nicotiana tomentosi
JMFS143A08Sequence447007618 (3)ref|XP_009628623.1|4e-29PREDICTED: uncharacterized protein LOC104118935 isoform X3 [Nicotiana tomentosi

Alignment

This contig is upended


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JMFS106B08+                            TAACGAGACGGGAGGGGCTTCTGATAGTGACGTTTCGGGCTTC
JMFS059B10+                                                                    TTC
                      ____________________________________________________________
consensus                              TAACGAGACGGGAGGGGCTTCTGATAGTGACGTTTCGGGCTTC
 
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JMFS106B08+           CCGGGGCTCTGAGGGGCGTTGGAAGTAACGGATATAGTAACCGGGACAACGGGTATTTCT
JMFS059B10+           CCGGGGCTCTGAGGGGCGTTGGAAGTAACGGATATAGTAACCGGGACAACGGGTATTTCT
                      ____________________________________________________________
consensus             CCGGGGCTCTGAGGGGCGTTGGAAGTAACGGATATAGTAACCGGGACAACGGGTATTTCT
 
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JMFS106B08+           TCGACTTTCCTCGAAAACGAACCTCTAAACTTCATGTGATTTGCGTGGTATCTTGCAGAG
JMFS059B10+           TCGACTTTCCTCGAAAACGAACCTCTAAACTTCATGTGATTTGCGTGGTATCTTGCAGAG
                      ____________________________________________________________
consensus             TCGACTTTCCTCGAAAACGAACCTCTAAACTTCATGTGATTTGCGTGGTATCTTGCAGAG
 
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JMFS106B08+           GTGGGAGGCGAAGGGGACGGGAATATATTCCGAGATCCATCCACGCCTCGTGAGATAGAC
JMFS143A08+                           ACGGGAATATATTCCGAGATCCATCCACGCCTCGTGAGATAGAC
JMFS059B10+           GTGGGAGGCGAAGGGGACGGGAATATATTCCGAGATCCATCCACGCCTCGTGAGATAGAC
                      ____________________________________________________________
consensus             GTGGGAGGCGAAGGGGACGGGAATATATTCCGAGATCCATCCACGCCTCGTGAGATAGAC
 
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JMFS106B08+           GGGGACGAGAACTGGGAAGGAGACTTTCCCCCGGGCAATGCAAGTGGCTGAGGTATAACA
JMFS143A08+           GGGGACGAGAACTGGGAAGGAGACTTTCCCCCGGGCAATGCAAGTGGCTGAGGTATAACA
JMFS059B10+           GGGGACGAGAACTGGGAAGGAGACTTTCCCCCGGGCAATGCAAGTGGCTGAGGTATAACA
                      ____________________________________________________________
consensus             GGGGACGAGAACTGGGAAGGAGACTTTCCCCCGGGCAATGCAAGTGGCTGAGGTATAACA
 
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JMFS106B08+           TCGGTTGAAGTATAGATCGAAGCTTCGGGTTCAACGAACTTTCTTAAATCAGTTCCCGCG
JMFS143A08+           TCGGTTGAAGTATAGATCGAAGCTTCGGGTTCAACGAACTTTCTTAAATCAGTTCCCGCG
JMFS059B10+           TCGGTTGAAGTATAGATCGAAGCTTCGGGTTCAACGAACTTTCTTAAATCAGTTCCCGCG
                      ____________________________________________________________
consensus             TCGGTTGAAGTATAGATCGAAGCTTCGGGTTCAACGAACTTTCTTAAATCAGTTCCCGCG
 
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JMFS106B08+           ATTTTCAACGCCTCTATGTAAGCAATATGGGTAGCTGCTAAAAAACACCTGCCATCGAGT
JMFS143A08+           ATTTTCAACGCCTCTATGTAAGCAATATGGGTAGCTGCTAAAAAACACCTGCCATCGAGT
JMFS059B10+           ATTTTCAACGCCTCTATGTAAGCAATATGGGTAGCTGCTAAAAAACACCTGCCATCGAGT
                      ____________________________________________________________
consensus             ATTTTCAACGCCTCTATGTAAGCAATATGGGTAGCTGCTAAAAAACACCTGCCATCGAGT
 
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JMFS106B08+           GCTTGTCGAACATACTTTTTCCGCTCACGACAGAGCTGTAACGCCTTATCTTCTTCGATT
JMFS143A08+           GCTTGTCGAACATACTTTTTCCGCTCACGACAGAGCTGTAACGCCTTATCTTCTTCGATT
JMFS059B10+           GCTTGTCGAACATACTTTTTCCGCTCACGACAGAGCTGTAACGCCTTATCTTCTTCGATT
                      ____________________________________________________________
consensus             GCTTGTCGAACATACTTTTTCCGCTCACGACAGAGCTGTAACGCCTTATCTTCTTCGATT
 
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JMFS106B08+           TTAGAACTCACACCCCCCATTAAACAACCCCGAAATAAACCACTCCCGCGTTGCAATTCA
JMFS143A08+           TTAGAACTCACACCCCCCATTAAACAACCCCGAAATAAACCACTCCCGCGTTGCAATTCA
JMFS059B10+           TTAGAACTCACACCCCCCATTAAACAACCCCGAAATAAACCACTCCCGCGTTGCAATTCA
                      ____________________________________________________________
consensus             TTAGAACTCACACCCCCCATTAAACAACCCCGAAATAAACCACTCCCGCGTTGCAATTCA
 
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JMFS106B08+           AACACCCAAAGATCATCAATATATTACCAATTCGATCCTGATGGATTGAAGAAAAGTGGA
JMFS143A08+           AACACCCAAAGATCATCAATATATTACCAATTCGATCCTGATGGATTGAAGAAAAGTGGA
JMFS059B10+           AACACCCAAAGATCATCAATATATTACCAATTCGATCCTGATGGATTGAAGAAAAGTGGA
                      ____________________________________________________________
consensus             AACACCCAAAGATCATCAATATATTACCAATTCGATCCTGATGGATTGAAGAAAAGTGGA
 
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JMFS106B08+           AATGGAGCAAAATC-TGGAATTCAGAGAGGAATAGC                        
JMFS143A08+           AATGGAGCAAAATCTTGGAATTCAGAGAGGAATAGC                        
JMFS059B10+           AATGGAGCAAAATCTTGGAATTCAGAGAGGAATAGCCCCCCCCCCCACCCCCCTCCCAGA
                      ____________________________________________________________
consensus             AATGGAGCAAAATCTTGGAATTCAGAGAGGAATAGCCCCCCCCCCCACCCCCCTCCCAGA