Contig 007618:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS059B10Sequence621007618 (3)ref|XP_009628623.1|5e-50PREDICTED: uncharacterized protein LOC104118935 isoform X3 [Nicotiana tomentosi
JMFS106B08Sequence618007618 (3)ref|XP_009628623.1|3e-51PREDICTED: uncharacterized protein LOC104118935 isoform X3 [Nicotiana tomentosi
JMFS143A08Sequence447007618 (3)ref|XP_009628623.1|4e-29PREDICTED: uncharacterized protein LOC104118935 isoform X3 [Nicotiana tomentosi

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS106B08+ TAACGAGACGGGAGGGGCTTCTGATAGTGACGTTTCGGGCTTC
JMFS059B10+ TTC
                      ____________________________________________________________
consensus TAACGAGACGGGAGGGGCTTCTGATAGTGACGTTTCGGGCTTC
 
. : . : . : . : . : . :
JMFS106B08+ CCGGGGCTCTGAGGGGCGTTGGAAGTAACGGATATAGTAACCGGGACAACGGGTATTTCT
JMFS059B10+ CCGGGGCTCTGAGGGGCGTTGGAAGTAACGGATATAGTAACCGGGACAACGGGTATTTCT
                      ____________________________________________________________
consensus CCGGGGCTCTGAGGGGCGTTGGAAGTAACGGATATAGTAACCGGGACAACGGGTATTTCT
 
. : . : . : . : . : . :
JMFS106B08+ TCGACTTTCCTCGAAAACGAACCTCTAAACTTCATGTGATTTGCGTGGTATCTTGCAGAG
JMFS059B10+ TCGACTTTCCTCGAAAACGAACCTCTAAACTTCATGTGATTTGCGTGGTATCTTGCAGAG
                      ____________________________________________________________
consensus TCGACTTTCCTCGAAAACGAACCTCTAAACTTCATGTGATTTGCGTGGTATCTTGCAGAG
 
. : . : . : . : . : . :
JMFS106B08+ GTGGGAGGCGAAGGGGACGGGAATATATTCCGAGATCCATCCACGCCTCGTGAGATAGAC
JMFS143A08+ ACGGGAATATATTCCGAGATCCATCCACGCCTCGTGAGATAGAC
JMFS059B10+ GTGGGAGGCGAAGGGGACGGGAATATATTCCGAGATCCATCCACGCCTCGTGAGATAGAC
                      ____________________________________________________________
consensus GTGGGAGGCGAAGGGGACGGGAATATATTCCGAGATCCATCCACGCCTCGTGAGATAGAC
 
. : . : . : . : . : . :
JMFS106B08+ GGGGACGAGAACTGGGAAGGAGACTTTCCCCCGGGCAATGCAAGTGGCTGAGGTATAACA
JMFS143A08+ GGGGACGAGAACTGGGAAGGAGACTTTCCCCCGGGCAATGCAAGTGGCTGAGGTATAACA
JMFS059B10+ GGGGACGAGAACTGGGAAGGAGACTTTCCCCCGGGCAATGCAAGTGGCTGAGGTATAACA
                      ____________________________________________________________
consensus GGGGACGAGAACTGGGAAGGAGACTTTCCCCCGGGCAATGCAAGTGGCTGAGGTATAACA
 
. : . : . : . : . : . :
JMFS106B08+ TCGGTTGAAGTATAGATCGAAGCTTCGGGTTCAACGAACTTTCTTAAATCAGTTCCCGCG
JMFS143A08+ TCGGTTGAAGTATAGATCGAAGCTTCGGGTTCAACGAACTTTCTTAAATCAGTTCCCGCG
JMFS059B10+ TCGGTTGAAGTATAGATCGAAGCTTCGGGTTCAACGAACTTTCTTAAATCAGTTCCCGCG
                      ____________________________________________________________
consensus TCGGTTGAAGTATAGATCGAAGCTTCGGGTTCAACGAACTTTCTTAAATCAGTTCCCGCG
 
. : . : . : . : . : . :
JMFS106B08+ ATTTTCAACGCCTCTATGTAAGCAATATGGGTAGCTGCTAAAAAACACCTGCCATCGAGT
JMFS143A08+ ATTTTCAACGCCTCTATGTAAGCAATATGGGTAGCTGCTAAAAAACACCTGCCATCGAGT
JMFS059B10+ ATTTTCAACGCCTCTATGTAAGCAATATGGGTAGCTGCTAAAAAACACCTGCCATCGAGT
                      ____________________________________________________________
consensus ATTTTCAACGCCTCTATGTAAGCAATATGGGTAGCTGCTAAAAAACACCTGCCATCGAGT
 
. : . : . : . : . : . :
JMFS106B08+ GCTTGTCGAACATACTTTTTCCGCTCACGACAGAGCTGTAACGCCTTATCTTCTTCGATT
JMFS143A08+ GCTTGTCGAACATACTTTTTCCGCTCACGACAGAGCTGTAACGCCTTATCTTCTTCGATT
JMFS059B10+ GCTTGTCGAACATACTTTTTCCGCTCACGACAGAGCTGTAACGCCTTATCTTCTTCGATT
                      ____________________________________________________________
consensus GCTTGTCGAACATACTTTTTCCGCTCACGACAGAGCTGTAACGCCTTATCTTCTTCGATT
 
. : . : . : . : . : . :
JMFS106B08+ TTAGAACTCACACCCCCCATTAAACAACCCCGAAATAAACCACTCCCGCGTTGCAATTCA
JMFS143A08+ TTAGAACTCACACCCCCCATTAAACAACCCCGAAATAAACCACTCCCGCGTTGCAATTCA
JMFS059B10+ TTAGAACTCACACCCCCCATTAAACAACCCCGAAATAAACCACTCCCGCGTTGCAATTCA
                      ____________________________________________________________
consensus TTAGAACTCACACCCCCCATTAAACAACCCCGAAATAAACCACTCCCGCGTTGCAATTCA
 
. : . : . : . : . : . :
JMFS106B08+ AACACCCAAAGATCATCAATATATTACCAATTCGATCCTGATGGATTGAAGAAAAGTGGA
JMFS143A08+ AACACCCAAAGATCATCAATATATTACCAATTCGATCCTGATGGATTGAAGAAAAGTGGA
JMFS059B10+ AACACCCAAAGATCATCAATATATTACCAATTCGATCCTGATGGATTGAAGAAAAGTGGA
                      ____________________________________________________________
consensus AACACCCAAAGATCATCAATATATTACCAATTCGATCCTGATGGATTGAAGAAAAGTGGA
 
. : . : . : . : . : . :
JMFS106B08+ AATGGAGCAAAATC-TGGAATTCAGAGAGGAATAGC
JMFS143A08+ AATGGAGCAAAATCTTGGAATTCAGAGAGGAATAGC
JMFS059B10+ AATGGAGCAAAATCTTGGAATTCAGAGAGGAATAGCCCCCCCCCCCACCCCCCTCCCAGA
                      ____________________________________________________________
consensus AATGGAGCAAAATCTTGGAATTCAGAGAGGAATAGCCCCCCCCCCCACCCCCCTCCCAGA