Contig 007614:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS052G09Sequence610007614 (2)ref|XP_008235555.1|2e-57PREDICTED: myosin-6-like [Prunus mume]
JMFS117F07Sequence638007614 (2)gb|KJB26060.1|9e-136hypothetical protein B456_004G2231002, partial [Gossypium raimondii] gb|KJB26061

Alignment

This contig is upended


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JMFS117F07+                                                        ATGGAATGTCCTTGG
                      ____________________________________________________________
consensus                                                          ATGGAATGTCCTTGG
 
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JMFS117F07+           ATGTCCCAGTTTGTACCTTGAAGTTCCTCTGCAGGTGCAGCACAGAGCAAATAGAAACAG
                      ____________________________________________________________
consensus             ATGTCCCAGTTTGTACCTTGAAGTTCCTCTGCAGGTGCAGCACAGAGCAAATAGAAACAG
 
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JMFS117F07+           TGATAGTTTCTCTCAGGATCAGATAATTGGCAAACCCGAGATCTTTCCAGCAAATATGTT
                      ____________________________________________________________
consensus             TGATAGTTTCTCTCAGGATCAGATAATTGGCAAACCCGAGATCTTTCCAGCAAATATGTT
 
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JMFS117F07+           CTGATAGCAGCTCCTGAAATCCTTCCTTTCTGATCAAACTGAATCTCCACAAACTTACCA
                      ____________________________________________________________
consensus             CTGATAGCAGCTCCTGAAATCCTTCCTTTCTGATCAAACTGAATCTCCACAAACTTACCA
 
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JMFS117F07+           AACCGACTTGAGTTATTATTTCTGACAGTCTTCGCATTACCAAATGCTTCCAGAACAGGA
                      ____________________________________________________________
consensus             AACCGACTTGAGTTATTATTTCTGACAGTCTTCGCATTACCAAATGCTTCCAGAACAGGA
 
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JMFS117F07+           TTAGACTCCAGGACTTTCTGTTCAACTGTCCTCCCATCAGTTGCAGCTCTCCCTCCCATA
                      ____________________________________________________________
consensus             TTAGACTCCAGGACTTTCTGTTCAACTGTCCTCCCATCAGTTGCAGCTCTCCCTCCCATA
 
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JMFS117F07+           TAAGCAAGATAACGCATTAATTGTTTTGTGCTTTCTGTTTTACCAGCACCACTCTCACCA
JMFS052G09+                                                             ACTCTCACCA
                      ____________________________________________________________
consensus             TAAGCAAGATAACGCATTAATTGTTTTGTGCTTTCTGTTTTACCAGCACCACTCTCACCA
 
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JMFS117F07+           CTGACCAATATTGACTGACTTATTCCTTCATTGATCATAAGTCTATACGCAGCATCTGCA
JMFS052G09+           CTGACCAATATTGACTGAACTATTCCTTCATTGATCATAAGTCTATACGCAGCATTTGCA
                      ____________________________________________________________
consensus             CTGACCAATATTGACTGACTTATTCCTTCATTGATCATAAGTCTATACGCAGCATTTGCA
 
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JMFS117F07+           ACGGCAAAGGGATGAGGACTCAGCTCCCCAAATGCAGCACCTTTATATTGTGCCATCATA
JMFS052G09+           TCGGCAAAGTGATGAGGACTCAGCTCCCCAAATGCAGCACCTTTATATTGTGCCTTCATA
                      ____________________________________________________________
consensus             TCGGCAAAGTGATGAGGACTCAGCTCCCCAAATGCAGCACCTTTATATTGTGCCTTCATA
 
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JMFS117F07+           TGAGTGTCATAAAGATGAGGTAATCTTCTAAAAGGATTGACAGCAATCAATATATTCCCT
JMFS052G09+           TGAGTGTCATAAAGATGAGGTAATTTTCTAAAAGGATTGACAGCAATCAATATATTCCCT
                      ____________________________________________________________
consensus             TGAGTGTCATAAAGATGAGGTAATTTTCTAAAAGGATTGACAGCAATCAATATATTCCCT
 
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JMFS117F07+           GT-ATACGTATATATTTCATTAATATCATATCTGGTTTTTAAATTTTGAAGAACACCAGG
JMFS052G09+           GTCATACGTATATATTTCATCTATATCATATCTGGTTTTTATATTTTGAAGAACACCAGG
                      ____________________________________________________________
consensus             GTCATACGTATATATTTCATTTATATCATATCTGGTTTTTATATTTTGAAGAACACCAGG
 
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JMFS117F07+           TTCATGCAGATAAGCCAGCTTTGT                                    
JMFS052G09+           TTCATGCAGATTAGCCAGCTTTGTCACATCATCGACACCACATGATGGAGCTTCAGCATC
                      ____________________________________________________________
consensus             TTCATGCAGATTAGCCAGCTTTGTCACATCATCGACACCACATGATGGAGCTTCAGCATC
 
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JMFS052G09+           TTTATGATAGATTTTGGAGGACTTAACAACTAACCGTTTTCCCAGATGTACAAAGAACCT
                      ____________________________________________________________
consensus             TTTATGATAGATTTTGGAGGACTTAACAACTAACCGTTTTCCCAGATGTACAAAGAACCT
 
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JMFS052G09+           TAACATTTTCACCCTTGACCTCCAAAACTTCCCCATCGATCCAGTGNTACATTAGGATCC
                      ____________________________________________________________
consensus             TAACATTTTCACCCTTGACCTCCAAAACTTCCCCATCGATCCAGTGNTACATTAGGATCC
 
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JMFS052G09+           TCCACCCAAACAAGAGACCCAACACCTAAGCTGACTATAGCAGCCATTTCTCGTTAAACC
                      ____________________________________________________________
consensus             TCCACCCAAACAAGAGACCCAACACCTAAGCTGACTATAGCAGCCATTTCTCGTTAAACC
 
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JMFS052G09+           GAAAGCAGATCAGATTCTCCTGCGGCGGCGTATCGATCAGCTCCGTGCTCAGATCTAATC
                      ____________________________________________________________
consensus             GAAAGCAGATCAGATTCTCCTGCGGCGGCGTATCGATCAGCTCCGTGCTCAGATCTAATC
 
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JMFS052G09+           AAAGCCGCAAAAAAACAATTCACTTCAAGCAGCAAATGCAAATGCAGACAGCAATGAGCT
                      ____________________________________________________________
consensus             AAAGCCGCAAAAAAACAATTCACTTCAAGCAGCAAATGCAAATGCAGACAGCAATGAGCT