| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003H24 | Sequence | 157 | 007609 (11) | 630 | 010964 (5) | emb|CBI20987.3| | 3e-71 | unnamed protein product [Vitis vinifera] | |||
| JMFF006C01 | Sequence | 160 | 007609 (11) | 504 | 010964 (5) | gb|EYU21923.1| | 3e-38 | hypothetical protein MIMGU_mgv1a000972mg [Erythranthe guttata] | |||
| JMFF013D22 | Sequence | 149 | 007609 (11) | 658 | 010964 (5) | emb|CBI20987.3| | 6e-83 | unnamed protein product [Vitis vinifera] | |||
| JMFS030B08 | Sequence | 558 | 007609 (11) | emb|CDX72363.1| | 8e-46 | BnaC07g43850D [Brassica napus] | |||||
| JMFS040B03 | Sequence | 649 | 007609 (11) | gb|KJB83316.1| | 3e-53 | hypothetical protein B456_013G240700 [Gossypium raimondii] | |||||
| JMFS040B04 | Sequence | 470 | 007609 (11) | ref|XP_010232005.1| | 7e-18 | PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Brachypodium dis | |||||
| JMFS043C07 | Sequence | 622 | 007609 (11) | ref|XP_006382069.1| | 4e-53 | hypothetical protein POPTR_0006s26420g [Populus trichocarpa] gb|ERP59866.1| hypo | |||||
| JMFS046E02 | Sequence | 606 | 007609 (11) | ref|XP_002515594.1| | 3e-41 | hypothetical protein RCOM_0927510 [Ricinus communis] gb|EEF47043.1| hypothetical | |||||
| JMFS051C11 | Sequence | 614 | 007609 (11) | emb|CDX72363.1| | 1e-47 | BnaC07g43850D [Brassica napus] | |||||
| JMFS079B11 | Sequence | 627 | 007609 (11) | ref|XP_006382069.1| | 2e-54 | hypothetical protein POPTR_0006s26420g [Populus trichocarpa] gb|ERP59866.1| hypo | |||||
| JMFS128E06 | Sequence | 627 | 007609 (11) | ref|XP_006382069.1| | 6e-53 | hypothetical protein POPTR_0006s26420g [Populus trichocarpa] gb|ERP59866.1| hypo | |||||
This contig is upended
. : . : . : . : . : . :
JMFS128E06+ GCTGTTGTTGCGCTGGTCTCTGCAATAGAAG
____________________________________________________________
consensus GCTGTTGTTGCGCTGGTCTCTGCAATAGAAG
. : . : . : . : . : . :
JMFS128E06+ CTGTGCATTTGGCATTTGCTGCTGCTGTTGCGGCTGTTGGGGCTGCTGCTGCTGCTGCTG
____________________________________________________________
consensus CTGTGCATTTGGCATTTGCTGCTGCTGTTGCGGCTGTTGGGGCTGCTGCTGCTGCTGCTG
. : . : . : . : . : . :
JMFS043C07+ CTTTCATCAGCTGAGTCTCGATATAGGATGCAGCAACATC
JMFS040B04+ ATGCAGCAACATC
JMFS040B03+ CTTTCATCAGCTGAGTCTCGATATAGGATGCAGCAACATC
JMFS079B11+ CTTTCATCAGCTGAGTCTCGATATAGGATGCAGCAACATC
JMFS128E06+ TTGTTGTTGCTGTTCCCTCGCTTTCATCAGCTGAGTCTCGATATAGGATGCAGCAACATC
JMFS030B08+ CAGCAACATC
JMFS046E02+ ATAGGATGCAGCAACATC
JMFS051C11+ CGATATAGGATGCAGCACATNC
____________________________________________________________
consensus TTGTTGTTGCTGTTCCCTCGCTTTCATCAGCTGAGTCTCGATATAGGATGCAGCAACATC
. : . : . : . : . : . :
JMFS043C07+ AGAGTGCTTCTCATTAGTCCGAGCAATAAATATATCCCAAAACACTGACCA-CCATTCAA
JMFS040B04+ AGAGTGCTTCTCATTAGTCCGAACAATAAATATATCCCAAACAGCTGGCCATACATTCAA
JMFS040B03+ AGAGTGCTTCTCATTAGTCCGAGCAATAAATATATCCCAAAACACTGACCA-CCATTCAA
JMFS079B11+ AGAGTGCTTCTCATTAGTCCGAGCAATAAATATATCCCAAAACACTGACCA-CCATTCAA
JMFS128E06+ AGAGTGCTTCTCATTAGTCCGAGCAATAAATATATCCCAAAACACTGACCA-CCATTCAA
JMFS030B08+ AGAGTGCTTCTCATTAGTCCGAGCAATAAATATATCCCAAAACACTGACCA-CCATTCAA
JMFS046E02+ AGAGTGCTTCTCATTAGTCCGAGCAATAAATATATCCTAAAACACTGTCCA-CCATTCAA
JMFS051C11+ AGAGTGCTTCTCATTAGTNCGAGCAATAAATATATCCCAAAACACTGACCA-CCATTCAA
____________________________________________________________
consensus AGAGTGCTTCTCATTAGTCCGAGCAATAAATATATCCCAAAACACTGACCA-CCATTCAA
. : . : . : . : . : . :
JMFS043C07+ ATAGAAAACCACCAGGAGCGTCAATCGCAACTGGGTCGGATGAAACTTTCCCT-TCCGCT
JMFS040B04+ ATAGAAAACCCCCAGGAGCGTCAATCGGAACTGGGTCGGATGAAACTTTCCCTATCCGCT
JMFS040B03+ ATAGAAAACCACCAGGAGCGTCAATCGCAACTGGGTCGGATGAAACTTTCCCT-TCCGCT
JMFS079B11+ ATAGAAAACCACCAGGAGCGTCAATCGCAACTGGGTCGGATGAAACTTTCCCT-TCCGCT
JMFS128E06+ ATAGAAAACCACCAGGAGCGTCAATCGCAACTGGGTCGGATGAAACTTTCCCT-TCCGCT
JMFS030B08+ ATAGAAAACCACCAGGAGCGTCAATCGCAACTGGGTCGGATGAAACTTTCCCT-TCCGCT
JMFS046E02+ ATAGAAAACCACCAGGAGCGTCAATCGCAACTGGGTCGGATGATACTTTTCCT-TCCGCT
JMFS051C11+ ATAGAAAACCACCAGGAGCGTCAATCGCAACTGGGTCGGATGAAACTTTCCCT-TCCGCT
____________________________________________________________
consensus ATAGAAAACCACCAGGAGCGTCAATCGCAACTGGGTCGGATGAAACTTTCCCT-TCCGCT
. : . : . : . : . : . :
JMFS043C07+ TGAAAAGCCTGAGCAGTAGCCTTTA-AATCTCT-CTTCACTAAGTAATCATGAATATACA
JMFS040B04+ TGAAAAGCGTGAGCAGTAGCCTCTAGAATCTCTGCTTCATTAAGTAGTCATGAATATACA
JMFS040B03+ TGAAAAGCCTGAGCAGTAGCCTTTA-AATCTCT-CTTCACTAAGTAATCATGAATATACA
JMFS079B11+ TGAAAAGCCTGAGCAGTAGCCTTTA-AATCTCT-CTTCACTAAGTAATCATGAATATACA
JMFS128E06+ TGAAAAGCCTGAGCAGTAGCCTTTA-AATCTCT-CTTCACTAAGTAATCATGAATATACA
JMFS030B08+ TGAAAAGCCTGAGCAGTAGCCTTTA-AATCTCT-CTTCACTAAGTAATCATGAATATACA
JMFS046E02+ TGAAAAGCNTGAGCACTAGCCTTTT-AATCTCT-CTTCACTTAGTAATCATGAATATACA
JMFS051C11+ TGAAAAGCCTGAGCAGTAGCCTTTA-AATCTCT-CTTCACTAAGTAATCATGAATATACA
____________________________________________________________
consensus TGAAAAGCCTGAGCAGTAGCCTTTA-AATCTCT-CTTCACTAAGTAATCATGAATATACA
. : . : . : . : . : . :
JMFS043C07+ CATCTAACATTTTGTCAGCTTCCCAGTTGGTCTGAGACATGTTTCCTCAATCCAATTCAC
JMFS040B04+ CATCTAACATTTTGTCAGCTTACCAGTTGGTCTTAGACATGTTTCCTCAATGCAATTCAC
JMFS040B03+ CATCTAACATTTTGTCAGCTTCCCAGTTGGTCTGAGACATGTTTCCTCAATCCAATTCAC
JMFS079B11+ CATCTAACATTTTGTCAGCTTCCCAGTTGGTCTGAGACATGTTTCCTCAATCCAATTCAC
JMFS128E06+ CATCTAACATTTTGTCAGCTTCCCAGTTGGTCTGAGACATGTTTCCTCAATCCAATTCAC
JMFS030B08+ CATCTAACATTTTGTCAGCTTCCCAGTTGGTCTGAGACATGTTTCCTCAATCCAATTCAC
JMFS046E02+ CATCTAACATTTTGTCAGCTTCCCAGTTGGTCTGAGACATGTTTCCTCAATCCAATTCAC
JMFS051C11+ CATCTAACATTTTGTCAGCTTCCCAGTTGGTCTGAGACATGTTTCCTCAATCCAATTCAC
____________________________________________________________
consensus CATCTAACATTTTGTCAGCTTCCCAGTTGGTCTGAGACATGTTTCCTCAATCCAATTCAC
. : . : . : . : . : . :
JMFS043C07+ CCAAACCAAACAACCCTCTGTAATGTCAGATCCTAAGCCCTCA-ACTCCTTCAGCTCCTT
JMFS040B04+ CCAAACCAAACAACCGTATGTAATGTCAGATCCTAAGCCCTCACACTCCTTCAGTTCCTT
JMFS040B03+ CCAAACCAAACAACCCTCTGTAATGTCAGATCCTAAGCCCTCA-ACTCCTTCAGCTCCTT
JMFS079B11+ CCAAACCAAACAACCCTCTGTAATGTCAGATCCTAAGCCCTCA-ACTCCTTCAGCTCCTT
JMFS128E06+ CCAAACCAAACAACCCTCTGTAATGTCAGATCCTAAGCCCTCA-ACTCCTTCAGCTCCTT
JMFS030B08+ CCAAACCAAACAACCCTCTGTAATGTCAGATCCTAAGCCCTCA-ACTCCTTCAGCTCCTT
JMFS046E02+ CCTAACCAAACAACCCTCTGTAATGTCAGATCCTAAGCCCTCA-ACTCCTTCAGCTCCTT
JMFS051C11+ CCAAACCAAACAACCCTCTGTAATGTCAGATCCTAAGCCCTCA-ACTCCTTCAGCTCCTT
____________________________________________________________
consensus CCAAACCAAACAACCCTCTGTAATGTCAGATCCTAAGCCCTCA-ACTCCTTCAGCTCCTT
. : . : . : . : . : . :
JMFS043C07+ CTCTCCCAAGCTCTGTACTTTTTCGAGCTCGCCACAAACTAAAAATAAGGGGAAAAAACC
JMFS040B04+ CTATCCCGAGCTCTGTATTTGTTCGAGCTCGCCACAGACTACAAATAAGGGGAAAAAACC
JMFS040B03+ CTCTCCCAAGCTCTGTACTTTTTCGAGCTCGCCACAAACTAAAAATAAGGGGAAAAAACC
JMFS079B11+ CTCTCCCAAGCTCTGTACTTTTTCGAGCTCGCCACAAACTAAAAATAAGGGGAAAAAACC
JMFS128E06+ CTCTCCCAAGCTCTGTACTTTTTCGAGCTCGCCACAAACTAAAAATAAGGGGAAAAAACC
JMFS030B08+ CTCTCCCAAGCTCTGTACTTTTTCGAGCTCGCCACAAACTAAAAATAAGGGGAAAAAACC
JMFS046E02+ CTCTCCCAAGCTCTGTACTTTTTCGAGCTCGCCACAAATTAAAAATAAGGGGAAATAACC
JMFF006C01+ CTAAAAATAAGGGGAAAAAACC
JMFF003H24+ AAAATAAGGGGAAAAAACC
JMFF013D22+ CAAACTAAAAATAAGGGGNAAAAACC
JMFS051C11+ CTCTCCCAAGCTCTGTACTTTTTCGAGCTCGCCACAAACTAAAAATAAGGGGAAAAAACC
____________________________________________________________
consensus CTCTCCCAAGCTCTGTACTTTTTCGAGCTCGCCACAAACTAAAAATAAGGGGAAAAAACC
. : . : . : . : . : . :
JMFS043C07+ CAATCCTGCTGCTTTTATTCAAATTAAACAGAAAAA-ACCCCAAACTTCCATAGCCAAAA
JMFS040B04+ CAATCATGGCGCTTTTATTCTAATTAAACAGAAAAATACCCCCAACATCCATAGCCAAAA
JMFS040B03+ CAATCCTGCTGCTTTTATTCAAATTAAACAGAAAAA-ACCCCAAACTTCCATAGCCAAAA
JMFS079B11+ CAATCCTG
JMFS128E06+ CAATCCTGCTGCTTTTATTCAAATTAAACAGAAAAA-ACCCCAAACTTCCATAGCCAAAA
JMFS030B08+ CAATCCTGCTGCTTTTATTCAAATTAAACAGAAAAA-ACCCCAAACTTCCATAGCCAAAA
JMFS046E02+ CAATCCTGCTGCTTTTATTCAAATTAAACAGAAAAA-ACCCCAAACTTCCATAGCCAAAA
JMFF006C01+ CNATCCTGNTGNTTTTATTCAAATTAAACAGAAAAA-ACCCCAAACTTCCATAGCCAAAA
JMFF003H24+ CNATCCTGNTGCTTTTATTCAAATTAAACAGAAAAA-ACCCCAAACTTCCATANCCAAAA
JMFF013D22+ CAATCCTGNTGCTTTTATTCAAATTAAACAGAAAAA-ACCCCAAACTTCCATAGCCAAAA
JMFS051C11+ CAATCCTGCTGCTTTTATTCAAATTAAACAGAAAAA-ACCCCAAACTTCCATAGCCAAAA
____________________________________________________________
consensus CAATCCTGCTGCTTTTATTCAAATTAAACAGAAAAA-ACCCCAAACTTCCATAGCCAAAA
. : . : . : . : . : . :
JMFS043C07+ TAAAAGTACACTTTCAAGAAG-AAAAAAAAAACACCCAGAGAG
JMFS040B04+ TACAAGCACCCTTTCAAGAAGAAAAAAA
JMFS040B03+ TAAAAGTACACTTTCAAGAAG-AAAAAAAAAACACCCAGAGAGAATATAGATGAA
JMFS128E06+ TAAAAGTACACTTTCAAGAAGAAAAAAAAAAACACCCAGAGAGAATATAGATGAAGACCA
JMFS030B08+ TAAAAGTACACTTTCAAGAAG-AAAAAAAAAACACCCAGAGAGAATATAGATGAAGACCA
JMFS046E02+ TAAAAGTACACTTTCAAGAAG-AAAAAAAAAACACCCAGAGAGAACATAGATGAAGACCA
JMFF006C01+ TAAAAGTNCNCTTTCAAGAAG-AAAAAAAAAACACCCAGAGAGAATATAGATGAAGACCA
JMFF003H24+ TAAAAGTNCNCTTTCAAGAAG-AAAAAAAAAACACCCAGAGAGAATATAGATGAAGACCA
JMFF013D22+ TAAAAGTNCNCTTTCAAGAAG-AAAAAAAAAACACCCAGAGAGAATATAGATGAAGACCA
JMFS051C11+ TAAAAGTACACTTTCAAGAAG-AAAAAAAAAACACCCAGAGAGAATATAGATGAAGACCA
____________________________________________________________
consensus TAAAAGTACACTTTCAAGAAG-AAAAAAAAAACACCCAGAGAGAATATAGATGAAGACCA
. : . : . : . : . : . :
JMFS128E06+ GA
JMFS030B08+ GACACAGGACAGAGAATGAGAAACTTTCTTTTATTTTTTTTTCCCTTTTATTTAATGAGA
JMFS046E02+ GTCACAGGACAGAGAATGAGAAACTTTCTTTTATTTTTTTTTCCCTTTTATTTAATGAGA
JMFF006C01+ GACACAGGACAGAGAATGAG
JMFF003H24+ GACACAGGACAGAGAATGAG
JMFF013D22+ GACAC
JMFS051C11+ GACACAGGACAGAGAATGAGAAACTTTCTTTTATTTTTTTTTCCCTTTTATTTAATGAGA
____________________________________________________________
consensus GACACAGGACAGAGAATGAGAAACTTTCTTTTATTTTTTTTTCCCTTTTATTTAATGAGA
. : . : . : . : . : . :
JMFS030B08+ TTTTTCAATTTTT
JMFS046E02+ TTTTTCAATTTTTNTGTGTCTTTCCATGTGGATTGAAAATTTCCCCCTTTTTT
JMFS051C11+ TTTTTCAATTTTTTTGTG-CTTTCCATGTGGATTGAAAATTTCCCCCTTTTTTTACTTTA
____________________________________________________________
consensus TTTTTCAATTTTTTTGTGTCTTTCCATGTGGATTGAAAATTTCCCCCTTTTTTTACTTTA