Contig 007607:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF026A10+                                       TCTCGGGGCCGTGGACAAGNCATGNCGCTGA
rJMFF012G10+                                                 GTGGACAAGGCATGACGCTGA
                      ____________________________________________________________
consensus                                          TCTCGGGGCCGTGGACAAGGCATGACGCTGA
 
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rJMSF026A10+          TTCTAAGATACCAGAAGCAATCCTCGATTAGAAGACGAATCTTTGAATATAGAAATCCTT
rJMFF020N09+                GATACCAGAAGCAATCCTNGATTAGAAGACGAATCTTTGAATATAGAAATCCTT
rJMFF012G10+          TTCTAAGATACCAGAAGCAATCCTCGATTAGAAGACGAATCTTTGAATATAGAAATCCTT
                      ____________________________________________________________
consensus             TTCTAAGATACCAGAAGCAATCCTCGATTAGAAGACGAATCTTTGAATATAGAAATCCTT
 
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rJMSF026A10+          CCGAGCCACCGCTTCCAAGCTCAATGTTCGAAGGCCTTCAAGTTCTTCTAGCCGACGATG
rJMFF020N09+          CCGAGCCACNGCTTCCAAGCTCAATGTTCGAAGGCCTTCAAGTTCTTCTAGCCGACGATG
rJMFF012G10+          CCGAGCCACCGCTTCCAAGCTCAATGTTCGAAGGCCTTCAAGTTCTTCTAGCCGACGATG
                      ____________________________________________________________
consensus             CCGAGCCACCGCTTCCAAGCTCAATGTTCGAAGGCCTTCAAGTTCTTCTAGCCGACGATG
 
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rJMSF026A10+          ACGGTGTGAATAGAATGGTGACTAAAAAGCTGCTCGAGAAGTTACGCTGCCAAGTATCCA
rJMFF020N09+          ACGGTGTGAATAGAATGGTGACTAAAAAGCTGCTCGAGAAGTTACGCTGCCAAGTATCCA
rJMFF012G10+          ACGGTGTGAATAGAATGGTGACTAAAAAGCTGCTCGAGAAGTTACGCTGCCAAGTATCCA
                      ____________________________________________________________
consensus             ACGGTGTGAATAGAATGGTGACTAAAAAGCTGCTCGAGAAGTTACGCTGCCAAGTATCCA
 
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rJMSF026A10+          CGGTTTCAACGGGTTTCGAATGCCTAAGCGCCCTAGGCCCCTCGGCAACTTCCTACCAAG
rJMFF020N09+          CGGTTTCAACGGGTTTCGAATGCCTAAGCGCCCTAGGCCCCTCGGCAACTTCCTACCAAG
rJMFF012G10+          CGGTTTCAACGGGTTTCGAATGCCTAAGCGCCCTAGGCCCCTCGGCAACTTCCTACCAAG
                      ____________________________________________________________
consensus             CGGTTTCAACGGGTTTCGAATGCCTAAGCGCCCTAGGCCCCTCGGCAACTTCCTACCAAG
 
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rJMSF026A10+          TCATCATCCTAGACCTTCACATGCCCGAAATGGACGGGTTNGAAGTGGCGATGAGAGTGC
rJMFF020N09+          TCATCATCCTAGACCTTCACATGCCCGAAATGGACGGGTTCGAAGTGGCGATGAGAGTGC
rJMFF012G10+          TCATCATCCTAGACCTTCACATGCCCGAAATGGACGGGTTCGAAGTGGCGATGAGAGTGC
                      ____________________________________________________________
consensus             TCATCATCCTAGACCTTCACATGCCCGAAATGGACGGGTTCGAAGTGGCGATGAGAGTGC
 
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rJMSF026A10+          GCAAGTTTCGGAGTCGCAACTGGCCGTTGATCATAGCCGTGACCGCGAGCTCGGAAGACC
rJMFF020N09+          GCAAGTTTCGGAGTCGCAACTGGCCGTTGATCATAGCCGTGACCGCGAGCTCGGAAGACC
rJMFF012G10+          GCAAGTTTCGGAGTCGCAACTGGCCGTTGATCATAGCCGTGACCGCGAGCTCGGAAGACC
                      ____________________________________________________________
consensus             GCAAGTTTCGGAGTCGCAACTGGCCGTTGATCATAGCCGTGACCGCGAGCTCGGAAGACC
 
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rJMSF026A10+          ATATGTGGGAAAGATGCCTCCAGGTGGGGATGAATGGTCTGATACGAAAACCCGTCCTCC
rJMFF020N09+          ATATGTGGGAAAGATGCCTCCAGGTGGGGATGAATGGTCTGATACGAAAACCCGTCCTCC
rJMFF012G10+          ATATGTGGGAAAGATGCCTCCAGGTGGGGATGAATGGTCTGATACGAAAACCCGTCCTCC
                      ____________________________________________________________
consensus             ATATGTGGGAAAGATGCCTCCAGGTGGGGATGAATGGTCTGATACGAAAACCCGTCCTCC
 
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rJMSF026A10+          TACAGAGACTTGCGGAAGAACTTCAGAGAGTCCTCCAGCGGGCTGGCAACGAAGTCATGT
rJMFF020N09+          TACAGAGACTTGCGGAAGAACTTCAGAGAGTCCTCCAGCGGGCTGGCAACGAAGTCATGT
rJMFF012G10+          TACAGAGACTTGCGGAAGAACTTCAGAGAGTCCTCCAGCGGGCTGGCAACGAAGTCATGT
                      ____________________________________________________________
consensus             TACAGAGACTTGCGGAAGAACTTCAGAGAGTCCTCCAGCGGGCTGGCAACGAAGTCATGT
 
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rJMSF026A10+          GAAAAGCTCGAGAGAGTAACGGCTGCCCGCCCCCCGGATCTTGAAAAGCTTGAGAATAAT
rJMFF020N09+          GAAAAGCTCGAGAGAGTAACGGCTGCCCGCCCCCCGGATCTTGAAAAGCTTGAGAATAAT
rJMFF012G10+          GAAAAGCTCGAGAGAGTAACGGCTGCCCGCCCCCCGGATCTTGAAAAGCTTGAGAATAAT
JMFS050C09-                    GAGAGAGAAACGGCTGCCCGCCCCCCGGATCTTGAAAAGCTTGAGAATAAT
                      ____________________________________________________________
consensus             GAAAAGCTCGAGAGAGTAACGGCTGCCCGCCCCCCGGATCTTGAAAAGCTTGAGAATAAT
 
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rJMSF026A10+          GGCGGCCCGTGGATCTTCATCTCCATAGACAATCCTAGCTTGTTCTTGCTAACTGCATAG
rJMFF020N09+          GGCGGCCCGTGGATCTTCATCTCCATAGACAATCCTAGCTTGTTCTTGCTAACTGCATAG
rJMFF012G10+          GGCGGCCCGTGGATCTTCATCTCCATAGACAATCCTAGCTTGTTCTTGCTAACTGCATAG
JMFS050C09-           GGCGGCCCGTGGATCTTCATCTCCATAGACAATCCTAGCTTGTTCTTGCTAACTGCATAG
                      ____________________________________________________________
consensus             GGCGGCCCGTGGATCTTCATCTCCATAGACAATCCTAGCTTGTTCTTGCTAACTGCATAG
 
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rJMSF026A10+          TTGGTGAAGTCCTCTGTATACATATATCTATATATTATAGGGAATAGGATTGCCANATCC
rJMFF020N09+          TTGGTGAAGTCCTCTGTATACATATATCTATATATTATAGGGAATAGGATTGCCATATCC
rJMFF012G10+          TTGGTGAAGTCCTCTGTATACATATATCTATATATTATAGGGAATAGGATTGCCATATCC
JMFS050C09-           TTGGTGAAGTCCTCTGTATACATATATCTATATATTATAGGGAATAGGATTGCCATATCC
                      ____________________________________________________________
consensus             TTGGTGAAGTCCTCTGTATACATATATCTATATATTATAGGGAATAGGATTGCCATATCC
 
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rJMSF026A10+          AGATGGTCTCTGTAAGG                                           
rJMFF020N09+          AGATGGTCTCTGTAAGGTTTACTTCCC                                 
rJMFF012G10+          AGATGGTCTCTGTAAGGTTTACTTCCCTTAGTGGC                         
JMFS050C09-           AGATGGTCTCTGTAAGGTTTACTTCCCTTAGTGGCATGGTTCTTTGAAAAATGGAAAGAG
                      ____________________________________________________________
consensus             AGATGGTCTCTGTAAGGTTTACTTCCCTTAGTGGCATGGTTCTTTGAAAAATGGAAAGAG