Contig 007602:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS007D12Sequence627007602 (3)ref|XP_009785912.1|6e-97PREDICTED: NAD kinase 2, chloroplastic-like isoform X3 [Nicotiana sylvestris]
JMFS044E07Sequence618007602 (3)ref|XP_004242047.1|9e-73PREDICTED: NAD kinase 2, chloroplastic [Solanum lycopersicum]
JMFS107E09Sequence618007602 (3)ref|XP_009770447.1|4e-105PREDICTED: NAD kinase 2, chloroplastic [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS107E09+                                                             AGCAGACCAG
                      ____________________________________________________________
consensus                                                               AGCAGACCAG
 
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JMFS107E09+           TTTGCAAACAATGACTGACAGGGAAAATCGTCTCTACGAGGAAACCCAGCATCATAACAT
JMFS007D12+                                                 AGGAAACCCAGCATCATAACAT
                      ____________________________________________________________
consensus             TTTGCAAACAATGACTGACAGGGAAAATCGTCTCTACGAGGAAACCCAGCATCATAACAT
 
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JMFS107E09+           ACGTTCTTCAGTCTTTGCAGTTTTCTCCACACATTTGTACTCCGAGCATCATCAGGTGTC
JMFS007D12+           ACGTTCTTCAGTCTTGNCAGTTTTCTCCACACATTTGTACTCCGAGCATCATCAGGTGTC
                      ____________________________________________________________
consensus             ACGTTCTTCAGTCTTTGCAGTTTTCTCCACACATTTGTACTCCGAGCATCATCAGGTGTC
 
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JMFS107E09+           AAGAAGTTTTCAAGAGCAACATGTAAACTCTCACAATAACTTTTCATCTCCCCCCTAAAA
JMFS007D12+           AAGAAGTTTTCAAGAGCAACATGTAAACTCTCACAATAACTTTTCATCTCCCCCCTAAAA
JMFS044E07+                                                     TTCATCTCCCCCCTAAAA
                      ____________________________________________________________
consensus             AAGAAGTTTTCAAGAGCAACATGTAAACTCTCACAATAACTTTTCATCTCCCCCCTAAAA
 
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JMFS107E09+           ACTGCCAGCGGAGGAACCTTATCCTCCATCATATCAACATCAACATCACGGAATGAGTTC
JMFS007D12+           ACTGCCAGCGGAGGAACCTTATCCTCCATCATATCAACATCAACATCACGGAATGAGTTC
JMFS044E07+           ACTGCCAGCGGAGGAACCTTATCCTCCATCATATCAACATCAACATCACGGAATGAGTTC
                      ____________________________________________________________
consensus             ACTGCCAGCGGAGGAACCTTATCCTCCATCATATCAACATCAACATCACGGAATGAGTTC
 
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JMFS107E09+           ATAATCCGCGACCTTCCAGATAGCACCTCCTCCCTCCCTTTATTCAAAAGACAGACCATG
JMFS007D12+           ATAATCCGCGACCTTCCAGATAGCACCTCCTCCCTCCCTTTATTCAAAAGACAGACCATG
JMFS044E07+           ATAATCCGCGACCTTCCAGATAGCACCTCCTCCCTCCCTTTATTCAAAAGACAGACCATG
                      ____________________________________________________________
consensus             ATAATCCGCGACCTTCCAGATAGCACCTCCTCCCTCCCTTTATTCAAAAGACAGACCATG
 
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JMFS107E09+           CAACCTAGAACAGAAACTATTTTATCTTCCAACAATGGTTTATCTTCTGATGGAACATCA
JMFS007D12+           CAACCTAGAACAGAAACTATTTTATCTTCCAACAATGGTTTATCTTCTGATGGAACATCA
JMFS044E07+           CAACCTAGAACAGAAACTATTTTATCTTCCAACAATGGTTTATCTTCTGATGGAACATCA
                      ____________________________________________________________
consensus             CAACCTAGAACAGAAACTATTTTATCTTCCAACAATGGTTTATCTTCTGATGGAACATCA
 
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JMFS107E09+           TATGAGACACTGCATTCCCCAGTCACGGGATTACATAGTGTGTCCATTAATGTATTCCGC
JMFS007D12+           TATGAGACACTGCATTCCCCAGTCACGGGATTACATAGTGTGTCCATTAATGTATTCCGC
JMFS044E07+           TATGAGACACTGCATTCCCCAGTCACGGGATTACATAGTGTGTCCATTAATGTATTCCGC
                      ____________________________________________________________
consensus             TATGAGACACTGCATTCCCCAGTCACGGGATTACATAGTGTGTCCATTAATGTATTCCGC
 
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JMFS107E09+           AGCTGTTCAGCTGCCCTGAAAATTCGGCAATAAGCCTCTACTTCTGCAATGTCCCCGGGC
JMFS007D12+           AGCTGTTCAGCTGCCCTGAAAATTCGGCAATAAGCCTCTACTTCTGCAATGTCCCCGGGC
JMFS044E07+           AGCTGTTCAGCTGCCCTGAAAATTCGGCAATAAGCCTCTACTTCTGCAATGTCCCCGGGC
                      ____________________________________________________________
consensus             AGCTGTTCAGCTGCCCTGAAAATTCGGCAATAAGCCTCTACTTCTGCAATGTCCCCGGGC
 
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JMFS107E09+           AGTGGACCAATCCATCGCAACTGTGATGTACCGCGTGACTGAGAATCCAAGCCGATGTTG
JMFS007D12+           AGTGGACCAATCCATCGCAACTGTGATGTACCGCGTGACTGAGAATCCAAGCCGATGTTG
JMFS044E07+           AGTGGACCAATCCATCGCAACTGTGATGTACCGCGTGACTGAGAATCCAAGCCGATGTTG
                      ____________________________________________________________
consensus             AGTGGACCAATCCATCGCAACTGTGATGTACCGCGTGACTGAGAATCCAAGCCGATGTTG
 
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JMFS107E09+           ACGGAGAAAGCGTTGGAAAGCTGAGCGGTGAGAAGGAGCTTGGGGCGATGGCGCCTTGGC
JMFS007D12+           ACGGAGAAAGCGTTGGAAAGCTGAGCGGTGAGAAGGAGCTTGGGGCGATGGCGCCTTGGC
JMFS044E07+           ACGGAGAAAGCGTTGGAAAGCTGAGCGGTGAGAAGGAGCTTGGGGCGATGGCGCCTTGGC
                      ____________________________________________________________
consensus             ACGGAGAAAGCGTTGGAAAGCTGAGCGGTGAGAAGGAGCTTGGGGCGATGGCGCCTTGGC
 
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JMFS107E09+           CATCTTTG                                                    
JMFS007D12+           CATCTTTGCTTCCTCTGCAGAGCAGACCCGTAGCAGAATCCGAATCCGGACCCGGACCCA
JMFS044E07+           CATCTTTGCTTCCTCTGCAGAGCAGACCCGTAGCAGAATCCGAATCCGGACCCGGACCCA
                      ____________________________________________________________
consensus             CATCTTTGCTTCCTCTGCAGAGCAGACCCGTAGCAGAATCCGAATCCGGACCCGGACCCA
 
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JMFS007D12+           GGAAA                                                       
JMFS044E07+           GGAAACCTAGTGGGAAAGTAGTTAGGATGATTGTGGGTCGCTCCGGCAGTAGTGATAGCC
                      ____________________________________________________________
consensus             GGAAACCTAGTGGGAAAGTAGTTAGGATGATTGTGGGTCGCTCCGGCAGTAGTGATAGCC
 
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JMFS044E07+           CGACTCATTTCCAAGTGGCGGCAAGGGCAGTACCCAACACACGTTGCCATGCCACCATGT
                      ____________________________________________________________
consensus             CGACTCATTTCCAAGTGGCGGCAAGGGCAGTACCCAACACACGTTGCCATGCCACCATGT