Contig 007601:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS004E08Sequence565007601 (3)ref|XP_009601448.1|2e-53PREDICTED: uncharacterized protein LOC104096744 isoform X3 [Nicotiana tomentosi
JMFS044C05Sequence625007601 (3)ref|XP_009601446.1|1e-54PREDICTED: uncharacterized protein LOC104096744 isoform X1 [Nicotiana tomentosi
JMFS137E07Sequence594007601 (3)ref|XP_009601446.1|7e-55PREDICTED: uncharacterized protein LOC104096744 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


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JMFS004E08+                                                   AAACGGGCAGAGATGTGCCT
JMFS137E07+                                              CAGGCAAACGGGCAGAGATGTGCCT
JMFS044C05+                                              CAGGCAAACGGGCAGAGATGTGCCT
                      ____________________________________________________________
consensus                                                CAGGCAAACGGGCAGAGATGTGCCT
 
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JMFS004E08+           TATATATTCCCTGCCTATATTCTTTACAATACTGTCAAGAAGGTAAAGAGATGGCAATTT
JMFS137E07+           TATATATTCCCTGCCTATATTCTTTACAATACTGTCAAGAAGGTAAAGAGATGGCAATTT
JMFS044C05+           TATATATTCCCTGCCTATATTCTTTACAATACTGTCAAGAAGGTAAAGAGATGGCAATTT
                      ____________________________________________________________
consensus             TATATATTCCCTGCCTATATTCTTTACAATACTGTCAAGAAGGTAAAGAGATGGCAATTT
 
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JMFS004E08+           CTGCTCAACTGGGGCCTCCAGAATACGAGAACAGATTGCATTCGCAATGCCCTGGCTGTG
JMFS137E07+           CTGCTCAACTGGGGCCTCCAGAATACGAGAACAGATTGCATTCGCAATGCCCTGGCTGTG
JMFS044C05+           CTGCTCAACTGGGGCCTCCAGAATACGAGAACAGATTGCATTCGCAATGCCCTGGCTGTG
                      ____________________________________________________________
consensus             CTGCTCAACTGGGGCCTCCAGAATACGAGAACAGATTGCATTCGCAATGCCCTGGCTGTG
 
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JMFS004E08+           CTCTCTCTGCTCCCCAGCAATTATGGTTAGTTCAGTAATGATAGGCTTCGAATTGAAAGT
JMFS137E07+           CTCTCTCTGCTCCCCAGCAATTATGGTTAGTTCAGTAATGATAGGCTTCGAATTGAAAGT
JMFS044C05+           CTCTCTCTGCTCCCCAGCAATTATGGTTAGTTCAGTAATGATAGGCTTCGAATTGAAAGT
                      ____________________________________________________________
consensus             CTCTCTCTGCTCCCCAGCAATTATGGTTAGTTCAGTAATGATAGGCTTCGAATTGAAAGT
 
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JMFS004E08+           CAAGTCCGACAACACAATCTCATAAAGCCTCACAACCTCATCCATAGTAGGAGGCGAAAT
JMFS137E07+           CAAGTCCGACAACACAATCTCATAAAGCCTCACAACCTCATCCATAGTAGGAGGCGAAAT
JMFS044C05+           CAAGTCCGACAACACAATCTCATAAAGCCTCACAACCTCATCCATAGTAGGAGGCGAAAT
                      ____________________________________________________________
consensus             CAAGTCCGACAACACAATCTCATAAAGCCTCACAACCTCATCCATAGTAGGAGGCGAAAT
 
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JMFS004E08+           GACACCATCTTCCGAAGAAACCCTAACCTCCTCATCTCGCTCCTTCAACATGGCCTTAAA
JMFS137E07+           GACACCATCTTCCGAAGAAACCCTAACCTCCTCATCTCGCTCCTTCAACATGGCCTTAAA
JMFS044C05+           GACACCATCTTCCGAAGAAACCCTAACCTCCTCATCTCGCTCCTTCAACATGGCCTTAAA
                      ____________________________________________________________
consensus             GACACCATCTTCCGAAGAAACCCTAACCTCCTCATCTCGCTCCTTCAACATGGCCTTAAA
 
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JMFS004E08+           CCGGTCGAGTATTGAGGGCGGCGCGGACTTTGAAGCTCCCGCAGATGTATCGTTTGACAT
JMFS137E07+           CCGGTCGAGTATTGAGGGCGGCGCGGACTTTGAAGCTCCCGCAGATGTATCGTTTGACAT
JMFS044C05+           CCGGTCGAGTATTGAGGGCGGCGCGGACTTTGAAGCTCCCGCAGATGTATCGTTTGACAT
                      ____________________________________________________________
consensus             CCGGTCGAGTATTGAGGGCGGCGCGGACTTTGAAGCTCCCGCAGATGTATCGTTTGACAT
 
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JMFS004E08+           TTGCTTAGAGCTAGCGAAGCTGCCTCCAATGGCCGCTCTAGGGTTCTGCAGTCTTGGTTC
JMFS137E07+           TTGCTTAGAGCTAGCGAAGCTGCCTCCAATGGCCGCTCTAGGGTTCTGCAGTCTTGGTTC
JMFS044C05+           TTGCTTAGAGCTAGCGAAGCTGCCTCCAATGGCCGCTCTAGGGTTCTGCAGTCTTGGTTC
                      ____________________________________________________________
consensus             TTGCTTAGAGCTAGCGAAGCTGCCTCCAATGGCCGCTCTAGGGTTCTGCAGTCTTGGTTC
 
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JMFS004E08+           GTTCATTGAGTCGATAGGCGATAAACAGATAATAAAGAAAAACGAATAGAAGATACTCCG
JMFS137E07+           GTTCATTGAGTCGATAGGCGATAAACAGATAATAAAGAAAAACGAATAGAAGATACTCCG
JMFS044C05+           GTTCATTGAGTCGATAGGCGATAAACAGATAATAAAGAAAAACGAATAGAAGATACTCCG
                      ____________________________________________________________
consensus             GTTCATTGAGTCGATAGGCGATAAACAGATAATAAAGAAAAACGAATAGAAGATACTCCG
 
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JMFS004E08+           CAAGTTCAGAGTCTCTACTGCGTAATGGTTAGGATTTTGAACCACCGTGCACGGTGGCGA
JMFS137E07+           CAAGTTCAGAGTCTCTACTGCGTAATGGTTAGGATTTTGAACCACCGTGCACGGTGGCGA
JMFS044C05+           CAAGTTCAGAGTCTCTACTGCGTAATGGTTAGGATTTTGAACCACCGTGCACGGTGGCGA
                      ____________________________________________________________
consensus             CAAGTTCAGAGTCTCTACTGCGTAATGGTTAGGATTTTGAACCACCGTGCACGGTGGCGA
 
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JMFS004E08+           TAGCG                                                       
JMFS137E07+           TAGCGGAGGAGAGATAAATGGCCGTTACA                               
JMFS044C05+           TAGCGGAGGAGAGATAAATGGCCGTTACAGCCCATCCGATTCAGAGAGGGGTTTAGAGTA
                      ____________________________________________________________
consensus             TAGCGGAGGAGAGATAAATGGCCGTTACAGCCCATCCGATTCAGAGAGGGGTTTAGAGTA