| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS008E06 | Sequence | 614 | 007600 (6) | ref|XP_009608800.1| | 8e-100 | PREDICTED: glutamate receptor 3.2-like [Nicotiana tomentosiformis] | |||||
| JMFS026F06 | Sequence | 623 | 007600 (6) | ref|XP_009608800.1| | 5e-71 | PREDICTED: glutamate receptor 3.2-like [Nicotiana tomentosiformis] | |||||
| JMFS042C11 | Sequence | 422 | 007600 (6) | ref|XP_006364369.1| | 1e-24 | PREDICTED: glutamate receptor 3.2-like [Solanum tuberosum] | |||||
| JMFS094F06 | Sequence | 642 | 007600 (6) | ref|XP_009608800.1| | 2e-80 | PREDICTED: glutamate receptor 3.2-like [Nicotiana tomentosiformis] | |||||
| JMFS117B04 | Sequence | 615 | 007600 (6) | ref|XP_009608800.1| | 5e-82 | PREDICTED: glutamate receptor 3.2-like [Nicotiana tomentosiformis] | |||||
| JMSF029E02 | Sequence | 681 | 007600 (6) | ref|XP_009608800.1| | 6e-98 | PREDICTED: glutamate receptor 3.2-like [Nicotiana tomentosiformis] | 737 | 016124 | ref|XP_009608800.1| | 5e-73 | PREDICTED: glutamate receptor 3.2-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFS008E06+ CGGAATCCGGTATGTAAGGCCGAAGCGTGAGGACCCCCTGCATGGTTTTGGCAACTCT
____________________________________________________________
consensus CGGAATCCGGTATGTAAGGCCGAAGCGTGAGGACCCCCTGCATGGTTTTGGCAACTCT
. : . : . : . : . : . :
JMFS008E06+ AGTGGAAACTGGAGCTAAAGAAGAGTCCAAGAAAGTGGAAAGCCAAGAAGTGGCAATCCA
____________________________________________________________
consensus AGTGGAAACTGGAGCTAAAGAAGAGTCCAAGAAAGTGGAAAGCCAAGAAGTGGCAATCCA
. : . : . : . : . : . :
JMFS008E06+ AACATATTCATCTGTCATCATCCCAAGATCCCTGGCCACTTCAAACACCAGAATACCCGT
____________________________________________________________
consensus AACATATTCATCTGTCATCATCCCAAGATCCCTGGCCACTTCAAACACCAGAATACCCGT
. : . : . : . : . : . :
JMFS008E06+ TAAGGACAAGGTATGCACAACAATTACCCGGCACTCCATCAACCGCACCCGTATCAGTTC
____________________________________________________________
consensus TAAGGACAAGGTATGCACAACAATTACCCGGCACTCCATCAACCGCACCCGTATCAGTTC
. : . : . : . : . : . :
JMFS008E06+ ATCCTTAATGTCCTGCCGAGTGGCCGAGGGGTCAGGTGGGAGTATCGCCCTGTAAGAAAT
JMSF029E02+ CCTGCCGAGTGGCCGAGGGGTCAGGTGGGAGTATCGCCCTGTAAGAAAT
____________________________________________________________
consensus ATCCTTAATGTCCTGCCGAGTGGCCGAGGGGTCAGGTGGGAGTATCGCCCTGTAAGAAAT
. : . : . : . : . : . :
JMFS008E06+ CTTACAGCGCCTCTCGTAAAGCTTATCCCCCAGAGTGGCAATGCTATTCCGGCCTTGATC
JMSF029E02+ CTTACAGCGCCTCTCGTAAAGCTTATCCCCCAGAGTGGCAATGCTATTCCGGCCTTGATC
JMFS117B04+ TATTCCGGCCTTGATC
JMFS094F06+ TATTCCGGCCTTGATC
____________________________________________________________
consensus CTTACAGCGCCTCTCGTAAAGCTTATCCCCCAGAGTGGCAATGCTATTCCGGCCTTGATC
. : . : . : . : . : . :
JMFS008E06+ GTCGTCGGAGAAGACAGCGGTCACCTCACTATACCCAAAATAGCTAACCATATCCGCCAC
JMSF029E02+ GTCGTCGGAGAAGACAGCGGTCACCTCACTATACCCAAAATAGCTAACCATATCCGCCAC
JMFS117B04+ GTCGTCGGAGAAGACAGCGGTCACCTCACTATACCCAAAATAGCTAACCATATCCGCCAC
JMFS094F06+ GTCGTCGGAGAAGACAGCGGTCACCTCACTATACCCAAAATAGCTAACCATATCCGCCAC
JMFS026F06+ ACTATACCCAAAATAGCTAACCATATCCGCCAC
____________________________________________________________
consensus GTCGTCGGAGAAGACAGCGGTCACCTCACTATACCCAAAATAGCTAACCATATCCGCCAC
. : . : . : . : . : . :
JMFS008E06+ GGCGGTCATGAGGAACAGATCATTGGGCGCAGTTTGAATGAAATAGGGATACTGGAGAGG
JMSF029E02+ GGCGGTCATGAGGAACAGATCATTGGGCGCAGTTTGAATGAAATAGGGATACTGGAGAGG
JMFS117B04+ GGCGGTCATGAGGAACAGATCATTGGGCGCAGTTTGAATGAAATAGGGATACTGGAGAGG
JMFS094F06+ GGCGGTCATGAGGAACAGATCATTGGGCGCAGTTTGAATGAAATAGGGATACTGGAGAGG
JMFS026F06+ GGCGGTCATGAGGAACAGATCATTGGGCGCAGTTTGAATGAAATAGGGATACTGGAGAGG
____________________________________________________________
consensus GGCGGTCATGAGGAACAGATCATTGGGCGCAGTTTGAATGAAATAGGGATACTGGAGAGG
. : . : . : . : . : . :
JMFS008E06+ GGAGAGAGTGGGATCCAAGGCCGTGAAGGATAGAAATGGGACATGGAGTTCGTTTGCGAA
JMSF029E02+ GGAGAGAGTGGGATCCAAGGCCGTGAAGGATAGAAATGGGACATGGAGTTCGTTTGCGAA
JMFS117B04+ GGAGAGAGTGGGATCCAAGGCCGTGAAGGATAGAAATGGGACATGGAGTTCGTTTGCGAA
JMFS094F06+ GGAGAGAGTGGGATCCAAGGCCGTGAAGGATAGAAATGGGACATGGAGTTCGTTTGCGAA
JMFS026F06+ GGAGAGAGTGGGATCCAAGGCCGTGAAGGATAGAAATGGGACATGGAGTTCGTTTGCGAA
____________________________________________________________
consensus GGAGAGAGTGGGATCCAAGGCCGTGAAGGATAGAAATGGGACATGGAGTTCGTTTGCGAA
. : . : . : . : . : . :
JMFS008E06+ GTGGGAAAGCACATGGGCCATTACAGAACTTTGGGGGCCAATGATAGCTACGGTATCAGT
JMSF029E02+ GTGGGAAAGCACATGGGCCATTACAGAACTTTGGGGGCCAATGATAGCTACGGTATCAGT
JMFS117B04+ GTGGGAAAGCACATGGGCCATTACAGAACTTTGGGGGCCAATGATAGCTACGGTATCAGT
JMFS094F06+ GTGGGAAAGCACATGGGCCATTACAGAACTTTGGGGGCCAATGATAGCTACGGTATCAGT
JMFS026F06+ GTGGGAAAGCACATGGGCCATTACAGAACTTTGGGGGCCAATGATAGCTACGGTATCAGT
JMFS042C11+ GT
____________________________________________________________
consensus GTGGGAAAGCACATGGGCCATTACAGAACTTTGGGGGCCAATGATAGCTACGGTATCAGT
. : . : . : . : . : . :
JMFS008E06+ CTCCAGGAACTTCATT
JMSF029E02+ CTCCAGGAACTTCATTGCTCCCACAATTCCCAGGAATCCGCTGTAATTTGAATCGTGCAT
JMFS117B04+ CTCCAGGAACTTCATTGCTCCCACAATTCCCAGGAATCCGCTGTAATTTGAATCGTGCAT
JMFS094F06+ CTCCAGGAACTTCATTGCTCCCACAATTCCCAGGAATCCGCTGTAATTTGAATCGTGCAT
JMFS026F06+ CTCCAGGAACTTCATTGCTCCCACAATTCCCAGGAATCCGCTGTAATTTGAATCGTGCAT
JMFS042C11+ CTCCAGGAACTTCATTGCTCCCGCAATTCCCAGGAATCCGCTGTAATTTGAATCGTGCAT
____________________________________________________________
consensus CTCCAGGAACTTCATTGCTCCCACAATTCCCAGGAATCCGCTGTAATTTGAATCGTGCAT
. : . : . : . : . : . :
JMSF029E02+ ATAGAGATTGAGCTTTCTTCCGCCAAGGATAGTGGGATCAGAATTGATATCTACCACTGC
JMFS117B04+ ATAGAGATTGAGCTTTCTTCCGCCAAGGATAGTGGGATCAGAATTGATATCTACCACTGC
JMFS094F06+ ATAGAGATTGAGCTTTCTTCCGCCAAGGATAGTGGGATCAGAATTGATATCTACCACTGC
JMFS026F06+ ATAGAGATTGAGCTTTCTTCCGCCAAGGATAGTGGGATCAGAATTGATATCTACCACTGC
JMFS042C11+ ATAGAGATTGAGCTTTCTTCCGCCAAGGATAGTGGGATCAGAATTGATATCTACCACTGC
____________________________________________________________
consensus ATAGAGATTGAGCTTTCTTCCGCCAAGGATAGTGGGATCAGAATTGATATCTACCACTGC
. : . : . : . : . : . :
JMSF029E02+ AGCAGACATTGCAATTCTTGCTACTTGCCCATTAGTTGTCCCAAATGAAAAAATGGCTCC
JMFS117B04+ AGCAGACATTGCAATTCTTGCTACTTGCCCATTAGTTGTCCCAAATGAAAAAATGGCTCC
JMFS094F06+ AGCAGACATTGCAATTCTTGCTACTTGCCCATTAGTTGTCCCAAATGAAAAAATGGCTCC
JMFS026F06+ AGCAGACATTGCAATTCTTGCTACTTGCCCATTAGTTGTCCCAAATGAAAAAATGGCTCC
JMFS042C11+ AGCAGACATTGCAATTCTTGCTACTTGCCCATTAGTTGTCCCAAATGAAAAAATGGCTCC
____________________________________________________________
consensus AGCAGACATTGCAATTCTTGCTACTTGCCCATTAGTTGTCCCAAATGAAAAAATGGCTCC
. : . : . : . : . : . :
JMSF029E02+ AATGTTCACATCATCATCATTATCTTCTCTGCAAATTACCCTTCCAATAAGGAGGAGAGA
JMFS117B04+ AATGTTCACATCATCATCATTATCTTCTCTGCAAATTACCCTTCCAATAAGGAGGAGAGA
JMFS094F06+ AATGTTCACATCATCATCATTATCTTCTCTGCAAATTACCCTTCCAATAAGGAGGAGAGA
JMFS026F06+ AATGTTCACATCATCATCATTATCTTCTCTGCAAATTACCCTTCCAATAAGGAGGAGAGA
JMFS042C11+ AATGTTCACATCATCATCATTATCTTCTCTGCAAATTCCCCTTCCAATAAGGAGGAGAGA
____________________________________________________________
consensus AATGTTCACATCATCATCATTATCTTCTCTGCAAATTACCCTTCCAATAAGGAGGAGAGA
. : . : . : . : . : . :
JMSF029E02+ TGTCACA-ACTATCCA-AGGGATAATATCCATTGCATAGTACGTAATTTCCAGGAATTGA
JMFS117B04+ TGTCACA-ACTATCCA-AGGGATAATATCCATTGCATAGTACGTAATTTCCAGGAATTGA
JMFS094F06+ TGTCACA-ACTATCCA-AGGGATAATATCCATTGCATAGTACGTAATTTCCAGGAATTGA
JMFS026F06+ TGTCACA-ACTATCCA-AGGGATAATATCCATTGCATAGTACGTAATTTCCAGGAATTGA
JMFS042C11+ TGTCACAGACTATCCAGAGGGATAATATCCATTGCATAGTACGTAATTTCCAGGAATTGA
____________________________________________________________
consensus TGTCACA-ACTATCCA-AGGGATAATATCCATTGCATAGTACGTAATTTCCAGGAATTGA
. : . : . : . : . : . :
JMSF029E02+ TCCAAGCTAAGAGGTATAGTAGAAAGAAAACTT
JMFS117B04+ TCCAAGCTAAGAGGTATAGTAGAAAGAAAACTTGTTTCTATGGGAAAGAATGTCA
JMFS094F06+ TCCAAGCTAAGAGGTATAGTAGAAAGAAAACTTGTTTCTATGGGAAAGAATGTCAGCAAT
JMFS026F06+ TCCAAGCTAAGAGGTATAGTAGAAAGAAAACTTGTTTCTATGGGAAAGAATGTCAGCAAT
JMFS042C11+ TCCAAGCTAAGAGGTATAGTAGAAAGAAAACTTGTTTCTATGGGAAAGAATGTCAGCAAT
____________________________________________________________
consensus TCCAAGCTAAGAGGTATAGTAGAAAGAAAACTTGTTTCTATGGGAAAGAATGTCAGCAAT
. : . : . : . : . : . :
JMFS094F06+ GAAGCCCAAGTGGAG
JMFS026F06+ GAAGCCCAAGTGGAG-ACGACGACACAAGCTAGCCTGGAAGAAAAGAATGGTC
JMFS042C11+ CAAGCCCAAGTGGAGCACGACGACACAAGCTAGCCTGGAAGAAAAGCATGGTCGTCGTCA
____________________________________________________________
consensus GAAGCCCAAGTGGAGCACGACGACACAAGCTAGCCTGGAAGAAAAGCATGGTCGTCGTCA