Contig 007594:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS037B06Sequence621007594 (3)ref|XP_006360864.1|1e-18PREDICTED: cell division cycle and apoptosis regulator protein 1-like [Solanum
JMFS044E06Sequence623007594 (3)ref|XP_009770036.1|9e-41PREDICTED: cell division cycle and apoptosis regulator protein 1 [Nicotiana syl
JMFS070D09Sequence590007594 (3)ref|XP_009770036.1|2e-21PREDICTED: cell division cycle and apoptosis regulator protein 1 [Nicotiana syl

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS044E06+                                                          GAGCCTTTAGCAG
                      ____________________________________________________________
consensus                                                            GAGCCTTTAGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS044E06+           TTGTTCTTTTCTGATAACTGAAGCTTGATCCATGCGATCATATATTTCAGCCTGATGTTT
                      ____________________________________________________________
consensus             TTGTTCTTTTCTGATAACTGAAGCTTGATCCATGCGATCATATATTTCAGCCTGATGTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS044E06+           GTTAAAAGAAATACTGTCAGGATAACGAGTGGCAGGTTCAATGGGCAAATCTCTCCCGCC
JMFS070D09+                                                      GGCAAATCTCTCCCGCC
                      ____________________________________________________________
consensus             GTTAAAAGAAATACTGTCAGGATAACGAGTGGCAGGTTCAATGGGCAAATCTCTCCCGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS044E06+           CACATAACCACCACTATGTCGTTCACCATATTGGCGTCTTTCCAATGTTGGGTAATCAGG
JMFS070D09+           CACATANCCACCACTATGTCGTTCACCATATGGCGTCTTTNCCAATGTTGGGTAATCAGG
JMFS037B06+                                                    CCAATGTTGGGTAATCAGG
                      ____________________________________________________________
consensus             CACATAACCACCACTATGTCGTTCACCATATTGGGTTTTTTCCAATGTTGGGTAATCAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS044E06+           AACCCTATCAGAATAAAGTTCAGTTTTATGGCCATATATATGGCTGGTTGATGAAACATA
JMFS070D09+           AACCCTATCAGAATAAAGTTCAGTTTTATGGCCATATATATGGCTGGTTGATGAAACATA
JMFS037B06+           AACCCTATCAGAATAAAGTTCAGTTTTATGGCCATATATATGGCTGGTTGATGAAACATA
                      ____________________________________________________________
consensus             AACCCTATCAGAATAAAGTTCAGTTTTATGGCCATATATATGGCTGGTTGATGAAACATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS044E06+           GTCACCCAATGCGAACTTGGCTGAGTCTGTAATAGATGAACTGAAACCAGTGCGACCTTC
JMFS070D09+           GTCACCCAATGCGAACTTGGCTGAGTCTGTAATAGATGAACTGAAACCAGTGCGACCTTC
JMFS037B06+           GTCACCCAATGCGAACTTGGCTGAGTCTGTAATAGATGAACTGAAACCAGTGCGACCTTC
                      ____________________________________________________________
consensus             GTCACCCAATGCGAACTTGGCTGAGTCTGTAATAGATGAACTGAAACCAGTGCGACCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS044E06+           AATAGTGGATGGAACAGATGCTTTTCCAGTGATTGAAGCAGTCTGTTGAGCAGTAGAACC
JMFS070D09+           AATAGTGGATGGAACAGATGCTTTTCCAGTGATTGAAGCAGTCTGTTGAGCAGTAGAACC
JMFS037B06+           AATAGTGGATGGAACAGATGCTTTTCCAGTGATTGAAGCAGTCTGTTGAGCAGTAGAACC
                      ____________________________________________________________
consensus             AATAGTGGATGGAACAGATGCTTTTCCAGTGATTGAAGCAGTCTGTTGAGCAGTAGAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS044E06+           ATACACAGCACTGTATTGTCCACCATAACTAGGCCCAGAAGAGGGGTGATGACCATGAGT
JMFS070D09+           ATACACAGCACTGTATTGTCCACCATAACTAGGCCCAGAAGAGGGGTGATGACCATGAGT
JMFS037B06+           ATACACAGCACTGTATTGTCCACCATAACTAGGCCCAGAAGAGGGGTGATGACCATGAGT
                      ____________________________________________________________
consensus             ATACACAGCACTGTATTGTCCACCATAACTAGGCCCAGAAGAGGGGTGATGACCATGAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS044E06+           TCTGTATGCACTTGTATTTGCTTCTTGAGAACCCCCTAAAATTGATGAATGGCGCGAAGC
JMFS070D09+           TCTGTATGCACTTGTATTTGCTTCTTGAGAACCCCCTAAAATTGATGAATGGCGCGAAGC
JMFS037B06+           TCTGTATGCACTTGTATTTGCTTCTTGAGAACCCCCTAAAATTGATGAATGGCGCGAAGC
                      ____________________________________________________________
consensus             TCTGTATGCACTTGTATTTGCTTCTTGAGAACCCCCTAAAATTGATGAATGGCGCGAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS044E06+           AATTAGTAGTTGAGAGGAACCATCAGGTCCTGCAGCAGAGCTCCCAGAGTGGCCAGATAC
JMFS070D09+           AATTAGTAGTTGAGAGGAACCATCAGGTCCTGCAGCAGAGCTCCCAGAGTGGCCAGATAC
JMFS037B06+           AATTAGTAGTTGAGAGGAACCATCAGGTCCTGCAGCAGAGCTCCCAGAGTGGCCAGATAC
                      ____________________________________________________________
consensus             AATTAGTAGTTGAGAGGAACCATCAGGTCCTGCAGCAGAGCTCCCAGAGTGGCCAGATAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS044E06+           CAAGTTTTGCGCATAGGCGGATTGGGAGGAGTAGCCCTGCTGTTGTTGGCCATACGCATT
JMFS070D09+           CAAGTTTTGCGCATAGGCGGATTGGGAGGAGTAGCCCTGCTGTTGTTGGCCATACGCATT
JMFS037B06+           CAAGTTTTGCGCATAGGCGGATTGGGAGGAGTAGCCCTGCTGTTGTTGGCCATACGCATT
                      ____________________________________________________________
consensus             CAAGTTTTGCGCATAGGCGGATTGGGAGGAGTAGCCCTGCTGTTGTTGGCCATACGCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS044E06+           AGTCCCACGA                                                  
JMFS070D09+           AGTCCCACGAGAAGGATACATATCCGAATTTGACGAAAAGCCCTATC             
JMFS037B06+           AGTCCCACGAGAAGGATACATATCCGAATTTGACGAAAAGCCCTATCTACTCATGCGGAA
                      ____________________________________________________________
consensus             AGTCCCACGAGAAGGATACATATCCGAATTTGACGAAAAGCCCTATCTACTCATGCGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS037B06+           GACGGCGATGCGGCGGCGGCGACGGTGTCAATGGCAGCGTACGGCGGCACAGAGAAGTGA
                      ____________________________________________________________
consensus             GACGGCGATGCGGCGGCGGCGACGGTGTCAATGGCAGCGTACGGCGGCACAGAGAAGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS037B06+           AGGAGGAAAATTGAGGAGAATAATATGGTCGAGGGGATATAGATTGAGGTTGTATATTGG
                      ____________________________________________________________
consensus             AGGAGGAAAATTGAGGAGAATAATATGGTCGAGGGGATATAGATTGAGGTTGTATATTGG