| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009E18 | Sequence | 594 | 007593 (24) | ref|XP_007143489.1| | 1e-101 | hypothetical protein PHAVU_007G076200g [Phaseolus vulgaris] gb|ESW15483.1| hypot | 749 | 007593 (24) | ref|XP_002276785.1| | 7e-107 | PREDICTED: 60S ribosomal protein L9 [Vitis vinifera] |
| JMFF011J23 | Sequence | 592 | 007593 (24) | gb|AHA84178.1| | 2e-101 | 60S ribosomal protein L9 [Phaseolus vulgaris] | 773 | 007593 (24) | ref|XP_002276785.1| | 1e-116 | PREDICTED: 60S ribosomal protein L9 [Vitis vinifera] |
| JMFF016P08 | Sequence | 610 | 007593 (24) | gb|KHN02144.1| | 2e-79 | 60S ribosomal protein L9 [Glycine soja] gb|KHN19580.1| 60S ribosomal protein L9 | 796 | 007593 (24) | ref|XP_002276785.1| | 8e-64 | PREDICTED: 60S ribosomal protein L9 [Vitis vinifera] |
| JMFF017P22 | Sequence | 561 | 007593 (24) | gb|AHA84178.1| | 2e-94 | 60S ribosomal protein L9 [Phaseolus vulgaris] | 785 | 007593 (24) | ref|XP_002276785.1| | 4e-78 | PREDICTED: 60S ribosomal protein L9 [Vitis vinifera] |
| JMFF020F23 | Sequence | 578 | 007593 (24) | gb|AHA84178.1| | 1e-72 | 60S ribosomal protein L9 [Phaseolus vulgaris] | 712 | 007593 (24) | ref|XP_002276785.1| | 7e-80 | PREDICTED: 60S ribosomal protein L9 [Vitis vinifera] |
| JMFF028J19 | Sequence | 508 | 007593 (24) | ref|XP_008437538.1| | 9e-80 | PREDICTED: 60S ribosomal protein L9 [Cucumis melo] gb|ADN33776.1| 60S ribosomal | |||||
| JMFF033F03 | Sequence | 538 | 007593 (24) | gb|AHA84178.1| | 3e-96 | 60S ribosomal protein L9 [Phaseolus vulgaris] | 664 | 007593 (24) | ref|XP_002276785.1| | 2e-93 | PREDICTED: 60S ribosomal protein L9 [Vitis vinifera] |
| JMFF042E20 | Sequence | 617 | 007593 (24) | gb|AHA84178.1| | 3e-83 | 60S ribosomal protein L9 [Phaseolus vulgaris] | 621 | 007593 (24) | ref|XP_002276785.1| | 1e-65 | PREDICTED: 60S ribosomal protein L9 [Vitis vinifera] |
| JMFF049G24 | Sequence | 640 | 007593 (24) | ref|XP_002276785.1| | 2e-117 | PREDICTED: 60S ribosomal protein L9 [Vitis vinifera] | 589 | 007593 (24) | ref|XP_002276785.1| | 8e-83 | PREDICTED: 60S ribosomal protein L9 [Vitis vinifera] |
| JMFN025H22 | Sequence | 567 | 007593 (24) | ref|XP_002276785.1| | 3e-109 | PREDICTED: 60S ribosomal protein L9 [Vitis vinifera] | |||||
| JMFN032G09 | Sequence | 492 | 007593 (24) | ref|XP_008437538.1| | 1e-87 | PREDICTED: 60S ribosomal protein L9 [Cucumis melo] gb|ADN33776.1| 60S ribosomal | |||||
| JMFS034G07 | Sequence | 617 | 007593 (24) | ref|XP_008437538.1| | 2e-86 | PREDICTED: 60S ribosomal protein L9 [Cucumis melo] gb|ADN33776.1| 60S ribosomal | |||||
| JMSF018D17 | Sequence | 455 | 007593 (24) | ref|XP_008437538.1| | 2e-68 | PREDICTED: 60S ribosomal protein L9 [Cucumis melo] gb|ADN33776.1| 60S ribosomal | 779 | 007593 (24) | ref|XP_002276785.1| | 3e-116 | PREDICTED: 60S ribosomal protein L9 [Vitis vinifera] |
| JMSF023E06 | Sequence | 680 | 007593 (24) | ref|XP_002276785.1| | 3e-117 | PREDICTED: 60S ribosomal protein L9 [Vitis vinifera] | 779 | 007593 (24) | ref|XP_002276785.1| | 1e-116 | PREDICTED: 60S ribosomal protein L9 [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMFF049G24- GTTCAAACAAAACCATACAAATTAAGAAAAATTTAAACCAT
rJMFF042E20- ATGTTCAAACAAAACCATACAAATTAAGAAAAATTTAAACCAT
rJMFF020F23- AAAATTTAAACCAT
rJMFF009E18- ACCAT
rJMFF016P08- AATTTAAACCAT
rJMSF023E06- CCAT
rJMFF011J23- T
rJMSF018D17- CAT
____________________________________________________________
consensus ATGTTCAAACAAAACCATACAAATTAAGAAAAATTTAAACCAT
. : . : . : . : . : . :
rJMFF049G24- ACTGAATAGTTGATACAGTAAACTCATGACCTCAACACCAAAAACCTGAACTTAAAACAA
rJMFF042E20- ACTGAATAGTTGATACAGTAAACTCATGACCTCAACACCAAAAACCTGAACTTAAAACAA
rJMFF020F23- ACTGAATAGTTGATACAGTAAACTCATGACCTCAACACCAAAAACCTGAACTTAAAACAA
rJMFF009E18- ACTGAATAGTTGATACAGTAAACTCATGACCTCAACACCAAAAACCTGAACTTAAAACAA
rJMFF016P08- ACTGAATAGTTGATACAGTAAACTCATGACCTCGACACCAAAAACCTGAACTTAAAACAA
rJMSF023E06- ACTGAATAGTTGATACAGTAAACTCATGACCTCAACACCAAAAACCTGAACTTAAAACAA
rJMFF011J23- ACTGAATAGTTGATACAGTAAACTCATGACCTCAACACCAAAAACCTGAACTTAAAACAA
rJMSF018D17- ACTGAATAGTTGATACAGTAAACTCATGACCTCAACACCAAAAACCTGAACTTAAAACAA
____________________________________________________________
consensus ACTGAATAGTTGATACAGTAAACTCATGACCTCAACACCAAAAACCTGAACTTAAAACAA
. : . : . : . : . : . :
rJMFF049G24- GTATAACTGAGGCTCTAAATTGTGTTCAACATAAAGGAGAAACAAATACCCCAAAATACA
rJMFF042E20- GTATAACTGAGGCTCTAAATTGTGTTCAACATAAAGGAGAAACAAATACTCCAAAATACA
rJMFF020F23- GTATAACTGAGGCTCTAAATTGTGTTCAACATAAAGGAGAAACAAATACTCCAAAATACA
rJMFF009E18- GTATAACTGAGGCTCTAAATTGTGTTCAACATAAAGGAGAAACAAATACTCCAAAATACA
rJMFF016P08- GTATAACTGAGGCTCTAAATTGTGTTCAACATAAAGGAGAAACAAATACTCCAAAATACA
rJMSF023E06- GTATAACTGAGGCTCTAAATTGTGTTCAACATAAAGGAGAAACAAATACTCCAAAATACA
JMFF049G24+ A
JMFN025H22+ ATAAAGGAGAGACAAATTCTCCAAAATACA
rJMFF011J23- GTATAACTGAGGCTCTAAATTGTGTTCAACATAAAGGAGAAACAAATACTCCAAAATACA
JMSF023E06+ GGAGAAACAAATACTCCAAAATACA
rJMSF018D17- GTATAACTGAGGCTCTAAATTGTGTTCAACATAAAGGAGAAACAAATACTCCAAAATACA
____________________________________________________________
consensus GTATAACTGAGGCTCTAAATTGTGTTCAACATAAAGGAGAAACAAATACTCCAAAATACA
. : . : . : . : . : . :
rJMFF049G24- GTAGTAAGGAAATACACCCATTAACTAATCATTCTTCCTGGGCTATAGTTCCCTTTTCAC
rJMFF042E20- GTAGTAAGGAAATACACCCATTAACTAATCATTCTTCCTGGGCTATAGTTCCCTTTTCAC
rJMFF020F23- GTAGTAAGGAAATACACCCATTAACTAATCATTCTTCCTGGGCTATAGTTCCCTTTTCAC
rJMFF009E18- GTAGTAAGGAAATACACCCATTAACTAATCATTCTTCCTGGGCTATAGTTCCCTTTTCAC
rJMFF016P08- GTAGTAAGGAAATACACCCATTAACTAATCATTCTTCCTGGGCTATAGTTCCCTTTTCAC
rJMSF023E06- GTAGTAAGGAAATACACCCATTAACTAATCATTCTTCCTGGGCTATAGTTCCCTTTTCAC
JMFF049G24+ GTAGTAAGGAAATACACCCATTAACTAATCATTCTTCCTGGGCTATAGTTCCCTTTTCAC
JMFN025H22+ GTAGTAAGGAAATACACCCATTAACTAATCATTCTTCCTGGGCTATAGTTCCCTTTTCAC
rJMFF017P22- GTTCCCTTTTCAC
rJMFF033F03- GTTCCCTTTTCAC
rJMFF011J23- GTAGTAAGGAAATACACCCATTAACTAATCATTCTTCCTGGGCTATAGTTCCCTTTTCAC
JMSF023E06+ GTAGTAAGGAAATACACCCATTAACTAATCATTCTTCCTGGGCTATAGTTCCCTTTTCAC
JMFF016P08+ ATAGTTCCCTTTTCAC
rJMSF018D17- GTAGTAAGGAAATACACCCATTAACTAATCATTCTTCCTGGGCTATAGTTCCCTTTTCAC
JMFF042E20+ TCCCTTTTCAC
____________________________________________________________
consensus GTAGTAAGGAAATACACCCATTAACTAATCATTCTTCCTGGGCTATAGTTCCCTTTTCAC
. : . : . : . : . : . :
rJMFF049G24- TCACATAGATACCATCAAGAAACTTTCGGATATCCTTGTTCTTGACATGACATTTCTGGT
rJMFF042E20- TCACATAGATACCATCAAGAAACTTTCGGATATCCTTGTTCTTGACATGACATTTCTGGT
rJMFF020F23- TCACATAGATACCATCAAGAAACTTTCGGATATCCTTGTTCTTGACATGACATTTCTGGT
rJMFF009E18- TCACATAGATACCATCAAGAAACTTTCGGATATCCTTGTTCTTGACATGACATTTCTGGT
rJMFF016P08- TCACATAGATACCATCAAGAAACTTTCGGATATCCTTGTTCTTGACATGACATTTCTGGT
rJMSF023E06- TCACATAGATACCATCAAGAAACTTTCGGATATCCTTGTTCTTGACATGACATTTCTGGT
JMFF049G24+ TCACATAGATACCATCAAGAAACTTTCGGATATCCTTGTTCTTGACATGACATTTCTGGT
JMFN025H22+ TCACATAGATACCATCAAGAAACTTTCGGATATCCTTGTTCTTGACATGACATTTCTGGT
rJMFF017P22- TCACATAGATACCATCAAGAAACTTTCGGATATCCTTGTTCTTGACATGACATTTCTGGT
rJMFF033F03- TCACATAGATACCATCAAGAAACTTTCGGATATCCTTGTTCTTGACATGACATTTCTGGT
rJMFF011J23- TCACATAGATACCATCAAGAAACTTTCGGATATCCTTGTTCTTGACATGACATTTCTGGT
JMSF023E06+ TCACATAGATACCATCAAGAAACTTTCGGATATCCTTGTTCTTGACATGACATTTCTGGT
JMFF016P08+ TCACATAGATACCATCAAGAAACTTTCGGATATCNTTGTTCTTGACATGACATTTCTGGT
JMFF033F03+ TGGT
rJMSF018D17- TCACATAGATACCATCAAGAAACTTTCGGATATCCTTGTTCTTGACATGACATTTCTGGT
JMFF042E20+ TCACATAGATACCATCAAGAAACTTTCGGATATCCTTGTTCTTGACATGACATTTCTGGT
JMFF011J23+ CTTGACATGACATTTCTGGT
JMFF020F23+ TTGACATGACATTTCTGGT
JMFF009E18+ TTCTTGACATGACATTTCTGGT
____________________________________________________________
consensus TCACATAGATACCATCAAGAAACTTTCGGATATCCTTGTTCTTGACATGACATTTCTGGT
. : . : . : . : . : . :
rJMFF049G24- TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
rJMFF042E20- TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
rJMFF020F23- TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
rJMFF009E18- TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
rJMFF016P08- TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
rJMSF023E06- TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
JMFF049G24+ TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
JMFN025H22+ TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
rJMFF017P22- TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
rJMFF033F03- TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
rJMFF011J23- TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
JMSF023E06+ TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
JMFF016P08+ TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
JMFN032G09+ AGAAACAAGCTCAATGTCATTTCCATCCAATACCAGTTCAT
JMFF033F03+ TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
rJMSF018D17- TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
JMFF042E20+ TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
JMFF017P22+ ATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
JMFF011J23+ TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
JMFF020F23+ TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
JMFF009E18+ TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
JMFS034G07+ GTCATTGCCATCCAATACCAGTTCAT
____________________________________________________________
consensus TTATAAGGGCACAGGATCGAGAAACAAGCTCAATGTCATTGCCATCCAATACCAGTTCAT
. : . : . : . : . : . :
rJMFF049G24- CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
rJMFF042E20- CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
rJMFF020F23- CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
rJMFF009E18- CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
rJMFF016P08- CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
rJMSF023E06- CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
JMFF049G24+ CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
JMFN025H22+ CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
rJMFF017P22- CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
rJMFF033F03- CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
rJMFF011J23- CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
JMSF023E06+ CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
JMFF016P08+ CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
JMFN032G09+ CTTTACCTTTTTCAGATCGAATAACAGTCCCACCCTCAAGCATGTCAACTTTCCTATCCT
JMFF033F03+ CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
rJMSF018D17- CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
JMFF042E20+ CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
JMFF017P22+ CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
JMFF011J23+ CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
JMFF020F23+ CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
JMFF028J19+ TTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
JMFF009E18+ CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
JMSF018D17+ CT
JMFS034G07+ CCTTAACTTTNTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
____________________________________________________________
consensus CCTTAACTTTTTCAGATCGAATAACAGTCACACCCTCAAGCATGTCAACTTTCCTAACCT
. : . : . : . : . : . :
rJMFF049G24- TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
rJMFF042E20- TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
rJMFF020F23- TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
rJMFF009E18- TCTTCTCGCCAAGGAAGTTACGGATTTCAATGGCCTTGTTGGAATTAGTGATGGAAGCGT
rJMFF016P08- TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
rJMSF023E06- TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
JMFF049G24+ TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
JMFN025H22+ TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
rJMFF017P22- TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
rJMFF033F03- TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
rJMFF011J23- TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
JMSF023E06+ TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
JMFF016P08+ TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
JMFN032G09+ TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
JMFF033F03+ TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
rJMSF018D17- TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
JMFF042E20+ TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
JMFF017P22+ TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
JMFF011J23+ TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
JMFF020F23+ TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
JMFF028J19+ TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
JMFF009E18+ TCTTCTCGCCAAGGAAGTTACGGATTTCAATGGCCTTGTTGGAATTAGTGATGGAAGCGT
JMSF018D17+ TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
JMFS034G07+ TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
____________________________________________________________
consensus TCTTCTCGCCAAGGAAGTTACGGATTTCAATGCCCTTGTTGGAATTAGTGATGGAAGCGT
. : . : . : . : . : . :
rJMFF049G24- TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
rJMFF042E20- TGATGGGAAAGTGAGCGTAGACAAAGCGCA---TTGTAGCGGTAGCCCTTAGTGACGCC-
rJMFF020F23- TGATGGGAAAGTGAGCGTAGACAAAGCGCA---TTGTAGCGGTAGCCCTTAGTGACGCC-
rJMFF009E18- TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
rJMFF016P08- TGATGGGAAAGTGAGCGTAGACAAAGCGCATCCTTGTAGCGGTAGCCCTTAGTGACGCCG
rJMSF023E06- TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
JMFF049G24+ TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
JMFN025H22+ TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
rJMFF017P22- TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
rJMFF033F03- TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
rJMFF011J23- TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
JMSF023E06+ TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
JMFF016P08+ TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
JMFN032G09+ TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
JMFF033F03+ TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
rJMSF018D17- TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
JMFF042E20+ TGATGGGAAAGTGAGCGTAGACAAAGCGCA---TTGTAGCGGTAGCCCTTAGTGACGCC-
JMFF017P22+ TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
JMFF011J23+ TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
JMFF020F23+ TGATGGGAAAGTGAGCGTAGACAAAGCGCA---TTGTAGCGGTAGCCCTTAGTGACGCC-
JMFF028J19+ TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
JMFF009E18+ TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
JMSF018D17+ TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
JMFS034G07+ TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
____________________________________________________________
consensus TGATGGGAAAGTGAGCGTAGACAAAGCGCAT-CTTGTAGCGGTAGCCCTTAGTGACGCC-
. : . : . : . : . : . :
rJMFF049G24- GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
rJMFF042E20- GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
rJMFF020F23- GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
rJMFF009E18- GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
rJMFF016P08- GGTGATGAGGGTTATCGACGTGGCTGAGCGCGGTACG--TAGCGGCGGTGGTTTTGCGCG
rJMSF023E06- GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
JMFF049G24+ GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
JMFN025H22+ GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
rJMFF017P22- GGTGATGAGGGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
rJMFF033F03- GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
rJMFF011J23- GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
JMSF023E06+ GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
JMFF016P08+ GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACG--TAGCGGCGGTGGTTTTGCGCG
JMFN032G09+ GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
JMFF033F03+ GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
rJMSF018D17- GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
JMFF042E20+ GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
JMFF017P22+ GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
JMFF011J23+ GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
JMFF020F23+ GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
JMFF028J19+ GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
JMFF009E18+ GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
JMSF018D17+ GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
JMFS034G07+ GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
____________________________________________________________
consensus GGTGATGA-GGTTATCGACGTGGCTGAGCGCGGTACGTATAGCGGCGGTGGTTTTGCGCG
. : . : . : . : . : . :
rJMFF049G24- ATCCGAACC
rJMFF042E20- ATCCGAACCAAGCACCCACC-TTAAGTTCCCGTTTTCCGGTCTC
rJMFF020F23- ATCCGAACCAAGCACCCACC-TTAAGTTCCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
rJMFF009E18- ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
rJMFF016P08- ATCCGAACCAAGCATCCACCTTTAAGTTTCCGTTTTCCTGTCTCGCCGGTGATGAGTTGG
rJMSF023E06- ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
JMFF049G24+ ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
JMFN025H22+ ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
rJMFF017P22- ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
rJMFF033F03- ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGT
rJMFF011J23- ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
JMSF023E06+ ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
JMFF016P08+ ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCTGTCTCGCCGGTGATGAGTT-G
JMFN032G09+ ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
JMFF033F03+ ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
rJMSF018D17- ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
JMFF042E20+ ATCCGAACCAAGCACCCACC-TTAAGTTCCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
JMFF017P22+ ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
JMFF011J23+ ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
JMFF020F23+ ATCCGAACCAAGCACCCACC-TTAAGTTCCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
JMFF028J19+ ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
JMFF009E18+ ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
JMSF018D17+ ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
JMFS034G07+ ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
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consensus ATCCGAACCAAGCATCCACC-TTAAGTTTCCGTTTTCCGGTCTCGTCGGTGATGAGTT-G
. : . : . : . : . : . :
rJMFF020F23- GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
rJMFF009E18- GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
rJMFF016P08- GAAATCCGAGGTTGAGGGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
rJMSF023E06- GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
JMFF049G24+ GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
JMFN025H22+ GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTC
rJMFF017P22- GAAATCCGAGGTTGA-NGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
rJMFF011J23- GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
JMSF023E06+ GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
JMFF016P08+ GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
JMFN032G09+ GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
JMFF033F03+ GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
rJMSF018D17- GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
JMFF042E20+ GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
JMFF017P22+ GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
JMFF011J23+ GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
JMFF020F23+ GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
JMFF028J19+ GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
JMFF009E18+ GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
JMSF018D17+ GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
JMFS034G07+ GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
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consensus GAAAT-CGAGGTTGA-GGTGCTTGAAGTTACGGACGAGCTTGCCCCTGGGACCCTCCACC
. : . : . : . : . : . :
rJMFF020F23- TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTC
rJMFF009E18- TCAA-TTTCCTTCGCTTTTACCTTGATCTTCACCCCCATCTGGGATGTCCATGGTCTCTG
rJMFF016P08- TCAATTTTCCTTCGCTTTTACCTTGATCTTCACCCCCATCTGGGATGTCCATGGTCTCTG
rJMSF023E06- TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
JMFF049G24+ TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
rJMFF017P22- TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
rJMFF011J23- TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
JMSF023E06+ TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
JMFF016P08+ TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
JMFN032G09+ TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
JMFF033F03+ TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
rJMSF018D17- TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
JMFF042E20+ TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
JMFF017P22+ TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
JMFF011J23+ TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
JMFF020F23+ TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
JMFF028J19+ TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
JMFF009E18+ TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
JMSF018D17+ TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
JMFS034G07+ TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
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consensus TCAA-TTTCCTTCGCTTTTACCTTGATCTTCA-CCCCATCTGGGATGTCCATGGTCTCTG
. : . : . : . : . : . :
rJMFF009E18- ANGAGAGTATCGTCTTCATGCTGTCTTTCCCA
rJMFF016P08- AGGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAACACACACACACTCTCTCTCT
rJMSF023E06- ANGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAACACACACACACTCTCTCTCT
JMFF049G24+ AGGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAACACACAC
rJMFF017P22- A
rJMFF011J23- AGGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAACACACACACACTCTCTCTCT
JMSF023E06+ AGGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAACACACACACACTCTCTCTCT
JMFF016P08+ AGGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAACACACACACACTCTCTCTCT
JMFN032G09+ AGGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAA
JMFF033F03+ AGGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAACACACACACACTCTCTCTCT
rJMSF018D17- AGGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAACACACACACACTCTCTCTCT
JMFF042E20+ AGGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAACACACACACACTCTCTCTCT
JMFF017P22+ AGGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAACACACACACACTCTCTCTCT
JMFF011J23+ AGGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAACACACACACACTCTCTCTCT
JMFF020F23+ AGGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAACACACACACACTCTCTCTCT
JMFF028J19+ AGGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAACACACACACACTCTCTCTCT
JMFF009E18+ AGGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAACACACACACACTCTCTCTCT
JMSF018D17+ AGGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAACACACACACACTCTCTCTCT
JMFS034G07+ AGGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAACACACACACACTCTCTCTCT
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consensus AGGAGAGTATCGTCTTCATGCTGTCTTTCCCAACAGTCAACACACACACACTCTCTCTCT
. : . : . : . : . : . :
rJMFF016P08- CT
rJMSF023E06- CTC
rJMFF011J23- C
JMSF023E06+ CTC
JMFF016P08+ CT
JMFF033F03+ CTC
rJMSF018D17- CTCAG
JMFF042E20+ CTCAGAGGCAGCAGAAA
JMFF017P22+ CTCAGAGGCAGCAGAAAAACCCTAGGAGGCAG
JMFF011J23+ CTCAGAGGCAGCAGAAAAACCCTAGGAGGCAGAAGAT
JMFF020F23+ CTCAGAGGCAGCAGAAAAACCCTAGGAGGC
JMFF028J19+ CTCAGAGGCAGCAGAAAAACCCTAGGAGGCAGAAGATTT
JMFF009E18+ CTCAGAGGCAGCAGAAAAACCCTAGGAGGCAGAAGATTT
JMSF018D17+ CTCAGAGGCAGCAGAAAAACCCTAGGAGGCAGAAGATTT
JMFS034G07+ CTCAGAGGCAGCAGAAAAACCCTAGGAGGCAGAAGATTTATGAGAGTGAACTGAAAACCC
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consensus CTCAGAGGCAGCAGAAAAACCCTAGGAGGCAGAAGATTTATGAGAGTGAACTGAAAACCC
. : . : . : . : . : . :
JMFS034G07+ TAAATACTTGAACGGGTTTTCTCTTTTGTTGGGCCAAGAGTAAAGAGAGCTCACTTCTTC
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consensus TAAATACTTGAACGGGTTTTCTCTTTTGTTGGGCCAAGAGTAAAGAGAGCTCACTTCTTC