Contig 007591:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS033A06Sequence502007591 (4)ref|XP_006364308.1|3e-62PREDICTED: receptor-like protein kinase HSL1-like [Solanum tuberosum]
JMFS056G03Sequence618007591 (4)ref|XP_006364308.1|2e-86PREDICTED: receptor-like protein kinase HSL1-like [Solanum tuberosum]
JMFS107B03Sequence638007591 (4)ref|XP_006364308.1|9e-77PREDICTED: receptor-like protein kinase HSL1-like [Solanum tuberosum]
JMFS121D02Sequence591007591 (4)ref|XP_006364308.1|4e-47PREDICTED: receptor-like protein kinase HSL1-like [Solanum tuberosum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS056G03+                                                   GATTCGTTAAGTTCCCCAGC
                      ____________________________________________________________
consensus                                                     GATTCGTTAAGTTCCCCAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107B03+                                       GGTTGTACGACAGATTCAACTGCTTCAAACTC
JMFS056G03+           TCCGGCGGGATCCGACCCGGAGAAAGCGGGTTGTACGACAGATTCAACTGCTTCAAACTC
                      ____________________________________________________________
consensus             TCCGGCGGGATCCGACCCGGAGAAAGCGGGTTGTACGACAGATTCAACTGCTTCAAACTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107B03+           GAAACATTCCCGAGAAACGCCGGAACCGTCCCGTCCAACAAATTCTCGACCAACCCCAAC
JMFS056G03+           GAAACATTCCCGAGAAACGCCGGAACCGTCCCGTCCAACAAATTCTCGACCAACCCCAAC
                      ____________________________________________________________
consensus             GAAACATTCCCGAGAAACGCCGGAACCGTCCCGTCCAACAAATTCTCGACCAACCCCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107B03+           ACTTCAAGCTTCTGAAACCTCCCGAAGCTGGCCGGAATGTCGCCGGAAAAATTATTCCCG
JMFS121D02+                                                                ATTCCCG
JMFS056G03+           ACTTCAAGCTTCTGAAACCTCCCGAAGCTGGCCGGAATGTCGCCGGAAAAATTATTCCCG
JMFS033A06+                                   AAGCTGGCCGGAATGTCGCCGGAAAAATTATTCCCG
                      ____________________________________________________________
consensus             ACTTCAAGCTTCTGAAACCTCCCGAAGCTGGCCGGAATGTCGCCGGAAAAATTATTCCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107B03+           CTCAAATCAAGGTACTTCAAGTTGGGCAGCTCCGCCAAAACCGGCGGAAGCGACCCAGTC
JMFS121D02+           CTCAAATCAAGGTACTTCAAGTTGGGCAGCTCCGCCANAACCGGCGGAAGCGACCCAGTC
JMFS056G03+           CTCAAATCAAGGTACTTCAAGTTGGGCAGCTCCGCCAAAACCGGCGGAAGCGACCCAGTC
JMFS033A06+           CTCAAATCAAGGTACTTCAAGTTGGGCAGCTCCGCCAAAACCGGCGGAAGCGACCCAGTC
                      ____________________________________________________________
consensus             CTCAAATCAAGGTACTTCAAGTTGGGCAGCTCCGCCAAAACCGGCGGAAGCGACCCAGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107B03+           AAGTAGTTCTGCGCCAAATCCAGATGCTCCATAGCCTTACATGCCGACAACCCATCCGGA
JMFS121D02+           AAGTAGTTCTGCGCCAAATCCAGATGCTCCATAGCCTTACATGCCGACAACCCATCCGGA
JMFS056G03+           AAGTAGTTCTGCGCCAAATCCAGATGCTCCATAGCCTTACATGCCGACAACCCATCCGGA
JMFS033A06+           AAGTAGTTCTGCGCCAAATCCAGATGCTCCATAGCCTTACATGCCGACAACCCATCCGGA
                      ____________________________________________________________
consensus             AAGTAGTTCTGCGCCAAATCCAGATGCTCCATAGCCTTACATGCCGACAACCCATCCGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107B03+           AGCGTGGAGGCTATCGAGTTGTTATAAAACGAAACAAAGCTCAAATCTTTAAGCCGGCAA
JMFS121D02+           AGCGTGGAGGCTATCGAGTTGTTATAAAACGAAACAAAGCTCAAATCTTTAAGCCGGCAA
JMFS056G03+           AGCGTGGAGGCTATCGAGTTGTTATAAAACGAAACAAAGCTCAAATCTTTAAGCCGGCAA
JMFS033A06+           AGCGTGGAGGCTATCGAGTTGTTATAAAACGAAACAAAGCTCAAATCTTTAAGCCGGCAA
                      ____________________________________________________________
consensus             AGCGTGGAGGCTATCGAGTTGTTATAAAACGAAACAAAGCTCAAATCTTTAAGCCGGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107B03+           AGAACCTCCGGGAAAGACCCACCAACATTCGCATTCGAAAGATCCAGAGCCGTCACCGAT
JMFS121D02+           AGAACCTCCGGGAAAGACCCACCAACATTCGCATTCGAAAGATCCAGAGCCGTCACCGAT
JMFS056G03+           AGAACCTCCGGGAAAGACCCACCAACATTCGCATTCGAAAGATCCAGAGCCGTCACCGAT
JMFS033A06+           AGAACCTCCGGGAAAGACCCACCAACATTCGCATTCGAAAGATCCAGAGCCGTCACCGAT
                      ____________________________________________________________
consensus             AGAACCTCCGGGAAAGACCCACCAACATTCGCATTCGAAAGATCCAGAGCCGTCACCGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107B03+           CCCGACCCGCCACATGAAACACCAAACCACTTACACGGCGACTTGTCGCCGTCATTCCAG
JMFS121D02+           CCCGACCCGCCACATGAAACACCAAACCACTTACACGGCGACTTGTCGCCGTCATTCCAG
JMFS056G03+           CCCGACCCGCCACATGAAACACCAAACCACTTACACGGCGACTTGTCGCCGTCATTCCAG
JMFS033A06+           CCCGACCCGCCACATGAAACACCAAACCACTTACACGGCGACTTGTCGCCGTCATTCCAG
                      ____________________________________________________________
consensus             CCCGACCCGCCACATGAAACACCAAACCACTTACACGGCGACTTGTCGCCGTCATTCCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107B03+           CCCGAAAGCACCCCATCCGGGTCGTCCAGCCCGACCTTCACACTGTGGAGATACAGAACT
JMFS121D02+           CCCGAAAGCACCCCATCCGGGTCGTCCAGCCCGACCTTCACACTGTGGAGATACAGAACT
JMFS056G03+           CCCGAAAGCACCCCATCCGGGTCGTCCAGCCCGACCTTCACACTGTGGAGATACAGAACT
JMFS033A06+           CCCGAAAGCACCCCATCCGGGTCGTCCAGCCCGACCTTCACACTGTGGAGATACAGAACT
                      ____________________________________________________________
consensus             CCCGAAAGCACCCCATCCGGGTCGTCCAGCCCGACCTTCACACTGTGGAGATACAGAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107B03+           TCCTGGTT                                                    
JMFS121D02+           TCCTGGTT                                                    
JMFS056G03+           TCCTGGTTTACAGAAACAACGAAAACTGGAAAGAAAAGAAGAACAAGAAAGACTTCAA  
JMFS033A06+           TCCTGGTTTACAGAAACAACGAAAACTGGAAAGAAAAGAAGAACAAGAAAGACTTCAAGC
                      ____________________________________________________________
consensus             TCCTGGTTTACAGAAACAACGAAAACTGGAAAGAAAAGAAGAACAAGAAAGACTTCAAGC