Contig 007587:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS026D06Sequence627007587 (4)
JMSF018B09Sequence248007587 (4)546007587 (4)gb|EMT17702.1|3e-08Subtilisin-like protease [Aegilops tauschii]
JMSF030E24Sequence609007587 (4)646015073ref|XP_009607194.1|107PREDICTED: uncharacterized protein LOC104101456 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF018B09- GTACACAGGGTAG
                      ____________________________________________________________
consensus GTACACAGGGTAG
 
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rJMSF018B09- TATGAAAATCTATTAGTTTTAGTGCAGATGTTATTGCAGTCTATGGTTTAGCTTTAAGCT
                      ____________________________________________________________
consensus TATGAAAATCTATTAGTTTTAGTGCAGATGTTATTGCAGTCTATGGTTTAGCTTTAAGCT
 
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rJMSF018B09- ACTATATATATATATATATACCAATTGTCATAATAGCAGATTTTATAGCAGCACCATTCC
                      ____________________________________________________________
consensus ACTATATATATATATATATACCAATTGTCATAATAGCAGATTTTATAGCAGCACCATTCC
 
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rJMSF018B09- AGTCNGGATGTCCGGATTTAAGAAGCGCAACGACAGCAGAGACATGAGGATCGGACCNTG
                      ____________________________________________________________
consensus AGTCNGGATGTCCGGATTTAAGAAGCGCAACGACAGCAGAGACATGAGGATCGGACCNTG
 
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rJMSF018B09- GATATGATGTTCCTGATAGGATGTTATACTTAACAGTTCGACTAGGTTTAGCTACAAACC
JMSF030E24+ ACTAGGTTCAGCTGCAAACC
JMFS026D06+ ACTAGGTTCAGCTGCAAACC
                      ____________________________________________________________
consensus GATATGATGTTCCTGATAGGATGTTATACTTAACAGTTCGACTAGGTTCAGCTGCAAACC
 
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rJMSF018B09- AAGTAGGCAAGCTTTGCCTGATAACCTAGATTATCTAACCACAAAATATGCAGCAATTAT
JMSF030E24+ AAGTATGCACGCTTTGCCTGATAACCTGGATAATCTAACCACAAAATATGCAGCAATTAT
JMFS026D06+ AAGTATGCACGCTTTGCCTGATAACCTGGATAATCTAACCACAAAATATGCAGCAATTAT
                      ____________________________________________________________
consensus AAGTATGCACGCTTTGCCTGATAACCTGGATAATCTAACCACAAAATATGCAGCAATTAT
 
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rJMSF018B09- CACCTCAAAACANTGCAAATTCAAGTAAATACTAAATACAGCTTCTAAGTTGTATAAAAC
JMSF030E24+ CACCTCAAAACAAGGCAAATTCAA-------CTAAATACAGCTTCTAAGTTCTATAAAAC
JMSF018B09+ A-------CTAAATACAGCTTCTAAGTTGTATAAAAC
JMFS026D06+ CACCTCAAAACAAGGCAAATTCAA-------CTAAATACAGCTTCTAAGTTCTATAAAAC
                      ____________________________________________________________
consensus CACCTCAAAACAAGGCAAATTCAA-------CTAAATACAGCTTCTAAGTTGTATAAAAC
 
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rJMSF018B09- CAAAATCAGTCCAGATTTACAAAAGCCTCGTGATTAAATACAAAAATTTCCCAATTAAAA
JMSF030E24+ CAAAATCAGTCCAAA-ATACAAAAGTCTCATGATTAAATACAAAAACCTCCCAATTCAAA
JMSF018B09+ CAAAATCAGTCCAGATTTACAAAAGCCTCGTGATTAAATACAAAAATTTCCCAATTAAAA
JMFS026D06+ CAAAATCAGTCCAAA-ATACAAAAGTCTCATGATTAAATACAAAAACCTCCCAATTCAAA
                      ____________________________________________________________
consensus CAAAATCAGTCCAGATTTACAAAAGCCTCGTGATTAAATACAAAAATTTCCCAATTAAAA
 
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rJMSF018B09- ATCGAATATGAATACAGAAACACGAAACATTTTAGAAAAGTTACCAATTGTCGTGAGCTT
JMSF030E24+ ATCAAATATGAATACAGAAGAGCGAAACATTTAAGAAAGATTACCAGTTGTCGGGAGCTT
JMSF018B09+ ATCGAATATGAATACAGAAACACGAAACATTTTAGAAAAGTTACCAATTGTCGTGAGCTT
JMFS026D06+ ATCAAATATGAATACAGAAGAGCGAAACATTTAAGAAAGATTACCAGTTGTCGGGAGCTT
                      ____________________________________________________________
consensus ATCGAATATGAATACAGAAACACGAAACATTTTAGAAAAGTTACCAATTGTCGTGAGCTT
 
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rJMSF018B09- TTGAACCCTAGAGTTACAATTTGGAGCCCC
JMSF030E24+ TTGAACCCTAGAGTTACAATTCGGAGCCCCGATTCGGCCTCGTCCTTCAGCAATGAAATT
JMSF018B09+ TTGAACCCTAGAGTTACAATTTGGAGCCCC
JMFS026D06+ TTGAACCCTAGAGTTACAATTCGGAGCCCCGATTCGGCCTCGTCCTTCAGCAATGAAATT
                      ____________________________________________________________
consensus TTGAACCCTAGAGTTACAATTTGGAGCCCCGATTCGGCCTCGTCCTTCAGCAATGAAATT
 
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JMSF030E24+ TAAGATAAGTTTTTTCCTATAATTTTCTAAAAGATTTTGATTTTGGTGGACCAAATCCGA
JMFS026D06+ TAAGATAAGTTTTTTCCTATAATTTTCTAAAAGATTTTGATTTTGGTGGACCAAATCCGA
                      ____________________________________________________________
consensus TAAGATAAGTTTTTTCCTATAATTTTCTAAAAGATTTTGATTTTGGTGGACCAAATCCGA
 
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JMSF030E24+ TCGTTGC
JMFS026D06+ TCGTTGCGGGAGACAGATGGTAGAATGATCGGTGCCAATAAAGTAATACTCCCGATGAAA
                      ____________________________________________________________
consensus TCGTTGCGGGAGACAGATGGTAGAATGATCGGTGCCAATAAAGTAATACTCCCGATGAAA