Contig 007587:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS026D06Sequence627007587 (4)
JMSF018B09Sequence248007587 (4)546007587 (4)gb|EMT17702.1|3e-08Subtilisin-like protease [Aegilops tauschii]
JMSF030E24Sequence609007587 (4)646015073ref|XP_009607194.1|107PREDICTED: uncharacterized protein LOC104101456 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF018B09-                                                         GTACACAGGGTAG
                      ____________________________________________________________
consensus                                                            GTACACAGGGTAG
 
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rJMSF018B09-          TATGAAAATCTATTAGTTTTAGTGCAGATGTTATTGCAGTCTATGGTTTAGCTTTAAGCT
                      ____________________________________________________________
consensus             TATGAAAATCTATTAGTTTTAGTGCAGATGTTATTGCAGTCTATGGTTTAGCTTTAAGCT
 
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rJMSF018B09-          ACTATATATATATATATATACCAATTGTCATAATAGCAGATTTTATAGCAGCACCATTCC
                      ____________________________________________________________
consensus             ACTATATATATATATATATACCAATTGTCATAATAGCAGATTTTATAGCAGCACCATTCC
 
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rJMSF018B09-          AGTCNGGATGTCCGGATTTAAGAAGCGCAACGACAGCAGAGACATGAGGATCGGACCNTG
                      ____________________________________________________________
consensus             AGTCNGGATGTCCGGATTTAAGAAGCGCAACGACAGCAGAGACATGAGGATCGGACCNTG
 
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rJMSF018B09-          GATATGATGTTCCTGATAGGATGTTATACTTAACAGTTCGACTAGGTTTAGCTACAAACC
JMSF030E24+                                                   ACTAGGTTCAGCTGCAAACC
JMFS026D06+                                                   ACTAGGTTCAGCTGCAAACC
                      ____________________________________________________________
consensus             GATATGATGTTCCTGATAGGATGTTATACTTAACAGTTCGACTAGGTTCAGCTGCAAACC
 
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rJMSF018B09-          AAGTAGGCAAGCTTTGCCTGATAACCTAGATTATCTAACCACAAAATATGCAGCAATTAT
JMSF030E24+           AAGTATGCACGCTTTGCCTGATAACCTGGATAATCTAACCACAAAATATGCAGCAATTAT
JMFS026D06+           AAGTATGCACGCTTTGCCTGATAACCTGGATAATCTAACCACAAAATATGCAGCAATTAT
                      ____________________________________________________________
consensus             AAGTATGCACGCTTTGCCTGATAACCTGGATAATCTAACCACAAAATATGCAGCAATTAT
 
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rJMSF018B09-          CACCTCAAAACANTGCAAATTCAAGTAAATACTAAATACAGCTTCTAAGTTGTATAAAAC
JMSF030E24+           CACCTCAAAACAAGGCAAATTCAA-------CTAAATACAGCTTCTAAGTTCTATAAAAC
JMSF018B09+                                  A-------CTAAATACAGCTTCTAAGTTGTATAAAAC
JMFS026D06+           CACCTCAAAACAAGGCAAATTCAA-------CTAAATACAGCTTCTAAGTTCTATAAAAC
                      ____________________________________________________________
consensus             CACCTCAAAACAAGGCAAATTCAA-------CTAAATACAGCTTCTAAGTTGTATAAAAC
 
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rJMSF018B09-          CAAAATCAGTCCAGATTTACAAAAGCCTCGTGATTAAATACAAAAATTTCCCAATTAAAA
JMSF030E24+           CAAAATCAGTCCAAA-ATACAAAAGTCTCATGATTAAATACAAAAACCTCCCAATTCAAA
JMSF018B09+           CAAAATCAGTCCAGATTTACAAAAGCCTCGTGATTAAATACAAAAATTTCCCAATTAAAA
JMFS026D06+           CAAAATCAGTCCAAA-ATACAAAAGTCTCATGATTAAATACAAAAACCTCCCAATTCAAA
                      ____________________________________________________________
consensus             CAAAATCAGTCCAGATTTACAAAAGCCTCGTGATTAAATACAAAAATTTCCCAATTAAAA
 
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rJMSF018B09-          ATCGAATATGAATACAGAAACACGAAACATTTTAGAAAAGTTACCAATTGTCGTGAGCTT
JMSF030E24+           ATCAAATATGAATACAGAAGAGCGAAACATTTAAGAAAGATTACCAGTTGTCGGGAGCTT
JMSF018B09+           ATCGAATATGAATACAGAAACACGAAACATTTTAGAAAAGTTACCAATTGTCGTGAGCTT
JMFS026D06+           ATCAAATATGAATACAGAAGAGCGAAACATTTAAGAAAGATTACCAGTTGTCGGGAGCTT
                      ____________________________________________________________
consensus             ATCGAATATGAATACAGAAACACGAAACATTTTAGAAAAGTTACCAATTGTCGTGAGCTT
 
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rJMSF018B09-          TTGAACCCTAGAGTTACAATTTGGAGCCCC                              
JMSF030E24+           TTGAACCCTAGAGTTACAATTCGGAGCCCCGATTCGGCCTCGTCCTTCAGCAATGAAATT
JMSF018B09+           TTGAACCCTAGAGTTACAATTTGGAGCCCC                              
JMFS026D06+           TTGAACCCTAGAGTTACAATTCGGAGCCCCGATTCGGCCTCGTCCTTCAGCAATGAAATT
                      ____________________________________________________________
consensus             TTGAACCCTAGAGTTACAATTTGGAGCCCCGATTCGGCCTCGTCCTTCAGCAATGAAATT
 
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JMSF030E24+           TAAGATAAGTTTTTTCCTATAATTTTCTAAAAGATTTTGATTTTGGTGGACCAAATCCGA
JMFS026D06+           TAAGATAAGTTTTTTCCTATAATTTTCTAAAAGATTTTGATTTTGGTGGACCAAATCCGA
                      ____________________________________________________________
consensus             TAAGATAAGTTTTTTCCTATAATTTTCTAAAAGATTTTGATTTTGGTGGACCAAATCCGA
 
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JMSF030E24+           TCGTTGC                                                     
JMFS026D06+           TCGTTGCGGGAGACAGATGGTAGAATGATCGGTGCCAATAAAGTAATACTCCCGATGAAA
                      ____________________________________________________________
consensus             TCGTTGCGGGAGACAGATGGTAGAATGATCGGTGCCAATAAAGTAATACTCCCGATGAAA