Contig 007586:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009F23Sequence591007586 (6)ref|XP_011088427.1|2e-41PREDICTED: 40S ribosomal protein S25 [Sesamum indicum] ref|XP_011092807.1| PREDI
JMFN004D21Sequence502007586 (6)ref|XP_011088427.1|9e-42PREDICTED: 40S ribosomal protein S25 [Sesamum indicum] ref|XP_011092807.1| PREDI
JMFN031M20Sequence510007586 (6)ref|XP_011088427.1|1e-41PREDICTED: 40S ribosomal protein S25 [Sesamum indicum] ref|XP_011092807.1| PREDI
JMFS025D03Sequence526007586 (6)ref|XP_011088427.1|1e-41PREDICTED: 40S ribosomal protein S25 [Sesamum indicum] ref|XP_011092807.1| PREDI
JMSF016N01Sequence236007586 (6)ref|XP_009616279.1|5e-04PREDICTED: 40S ribosomal protein S25 [Nicotiana tomentosiformis] ref|XP_00958990479007586 (6)ref|XP_011088427.1|4e-42PREDICTED: 40S ribosomal protein S25 [Sesamum indicum] ref|XP_011092807.1| PREDI

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN031M20+ GATCAGAATCAAATGCTCATAGTAGCCACATCAA
                      ____________________________________________________________
consensus GATCAGAATCAAATGCTCATAGTAGCCACATCAA
 
. : . : . : . : . : . :
rJMSF016N01- AACATAAAACACAATACAGTCACATGGCC
JMFN031M20+ AGTCTCATCAATTTAGGACAAAATAAAGTTAAACATAAAACACAATACAGTCACATGGCC
                      ____________________________________________________________
consensus AGTCTCATCAATTTAGGACAAAATAAAGTTAAACATAAAACACAATACAGTCACATGGCC
 
. : . : . : . : . : . :
rJMSF016N01- TGATAACTGAACCAACATTTTTCACTCCCTAAGAAACTAAATTTGCAAAATTTAGGTATT
JMFN004D21+ CAAAATTTAGGTATT
rJMFF009F23- CAAAATTTAGGTATT
JMFN031M20+ TGATAACTGAACCAACATTTTTCACTCCCTAAGAAACTAAATTTGCAAAATTTAGGTATT
JMFS025D03+ CAAAATTTAGGTATT
                      ____________________________________________________________
consensus TGATAACTGAACCAACATTTTTCACTCCCTAAGAAACTAAATTTGCAAAATTTAGGTATT
 
. : . : . : . : . : . :
rJMSF016N01- TGTAGCCCTGGTGTATATCTGCTGGCTGGCATGTGCTGACACCATCCTGATCAAACCTCT
JMFN004D21+ TGTAGCCCTGGTGTATATCTGCTGGCTGGCATGTGCTGACACCATCCTGATCAAACCTCT
rJMFF009F23- TGTAGCCCTGGTGTATATCTGCTGGCTGGCATGTGCTGACACCATCCTGATCAAACCTCT
JMFN031M20+ TGTAGCCCTGGTGTATATCTGCTGGCTGGCATGTGCTGACACCATCCTGATCAAACCTCT
JMFS025D03+ TGTAGCCCTGGTGTATATCTGCTGGCTGGCATGTGCTGACACCATCCTGATCAAACCTCT
                      ____________________________________________________________
consensus TGTAGCCCTGGTGTATATCTGCTGGCTGGCATGTGCTGACACCATCCTGATCAAACCTCT
 
. : . : . : . : . : . :
rJMSF016N01- TGCCATCAATTCACGGATTGCCCTTCTTGCAAGTGATCCGCTGATCCTCAAACGGTCGGA
JMFN004D21+ TGCCATCAATTCACGGATTGCCCTTCTTGCAAGTGATCCGCTGATCCTCAAACGGTCGGA
rJMFF009F23- TGCCATCAATTCACGGATTGCCCTTCTTGCAAGTGATCCGCTGATCCTCAAACGGTCGGA
JMFN031M20+ TGCCATCAATTCACGGATTGCCCTTCTTGCAAGTGATCCGCTGATCCTCAAACGGTCGGA
JMFS025D03+ TGCCATCAATTCACGGATTGCCCTTCTTGCAAGTGATCCGCTGATCCTCAAACGGTCGGA
                      ____________________________________________________________
consensus TGCCATCAATTCACGGATTGCCCTTCTTGCAAGTGATCCGCTGATCCTCAAACGGTCGGA
 
. : . : . : . : . : . :
rJMSF016N01- AAGTACGGAAGGGGTGATAAGCTTGTATTTGGGAGCTTCGGTTAGAAGCTTGTCGTAGGT
JMFN004D21+ AAGTACGGAAGGGGTGATAAGCTTGTATTTGGGAGCTTCGGTTAGAAGCTTGTCGTAGGT
rJMFF009F23- AAGTACGGAAGGGGTGATAAGCTTGTATTTGGGAGCTTCGGTTAGAAGCTTGTCGTAGGT
JMSF016N01+ TGGGAGCTTCGGTTAGAAGCTTGTCGTAGGT
JMFN031M20+ AAGTACGGAAGGGGTGATAAGCTTGTATTTGGGAGCTTCGGTTAGAAGCTTGTCGTAGGT
JMFS025D03+ AAGTACGGAAGGGGTGATAAGCTTGTATTTGGGAGCTTCGGTTAGAAGCTTGTCGTAGGT
                      ____________________________________________________________
consensus AAGTACGGAAGGGGTGATAAGCTTGTATTTGGGAGCTTCGGTTAGAAGCTTGTCGTAGGT
 
. : . : . : . : . : . :
rJMSF016N01- AGCCTTGTCGAAAAGCACCATGTTGTTCACCTTCTCCTTTTGCTTTCCCTTACTCCACTT
JMFN004D21+ AGCCTTGTCGAAAAGCACCATGTTGTTCACCTTCTCCTTTTGCTTTCCCTTACTCCACTT
rJMFF009F23- AGCCTTGTCGAAAAGCACCATGTTGTTCACCTTCTCCTTTTGCTTTCCCTTACTCCACTT
JMSF016N01+ AGCCTTGTCGAAAAGCACCATGTTGTTCACCTTCTCCTTTTGCTTTCCCTTACTCCACTT
JMFN031M20+ AGCCTTGTCGAAAAGCACCATGTTGTTCACCTTCTCCTTTTGCTTTCCCTTACTCCACTT
JMFS025D03+ AGCCTTGTCGAAAAGCACCATGTTGTTCACCTTCTCCTTTTGCTTTCCCTTACTCCACTT
                      ____________________________________________________________
consensus AGCCTTGTCGAAAAGCACCATGTTGTTCACCTTCTCCTTTTGCTTTCCCTTACTCCACTT
 
. : . : . : . : . : . :
rJMSF016N01- CTTCTTCTTCTGCTTGCCACCACCGGACTTGGCGGGCTTAGAGGATGGAGGAGGAGCCTT
JMFN004D21+ CTTCTTCTTCTGCTTGCCACCACCGGACTTGGCGGGCTTAGAGGATGGAGGAGGAGCCTT
rJMFF009F23- CTTCTTCTTCTGCTTGCCACCACCGGACTTGGCGGGCTTAGAGGATGGAGGAGGAGCCTT
JMSF016N01+ CTTCTTCTTCTGCTTGCCACCACCGGACTTGGCGGGCTTAGAGGATGGAGGAGGAGCCTT
JMFN031M20+ CTTCTTCTTCTGCTTGCCACCACCGGACTTGGCGGGCTTAGAGGATGGAGGAGGAGCCTT
JMFS025D03+ CTTCTTCTTCTGCTTGCCACCACCGGACTTGGCGGGCTTAGAGGATGGAGGAGGAGCCTT
                      ____________________________________________________________
consensus CTTCTTCTTCTGCTTGCCACCACCGGACTTGGCGGGCTTAGAGGATGGAGGAGGAGCCTT
 
. : . : . : . : . : . :
rJMSF016N01- ATCCTTCTTCGGTGCCAT
JMFN004D21+ ATCCTTCTTCGGTGCCATCGCAGACTGGAGAAGAAGCTGT
rJMFF009F23- ATCCTTCTTCGGTGCCAT
JMSF016N01+ ATCCTTCTTCGGTGCCAT
JMFN031M20+ ATCCTTCTTCGGTGCCATCGCAGACTGGAGAAGAAGCTGTAGAGGCTAGGGAATGA
JMFS025D03+ ATCCTTCTTCGGTGCCATCGCAGACTGGAGAAGAAGCTGTAGAGGCTAGGGAATGAGGCA
                      ____________________________________________________________
consensus ATCCTTCTTCGGTGCCATCGCAGACTGGAGAAGAAGCTGTAGAGGCTAGGGAATGAGGCA