| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009F23 | Sequence | 591 | 007586 (6) | ref|XP_011088427.1| | 2e-41 | PREDICTED: 40S ribosomal protein S25 [Sesamum indicum] ref|XP_011092807.1| PREDI | |||||
| JMFN004D21 | Sequence | 502 | 007586 (6) | ref|XP_011088427.1| | 9e-42 | PREDICTED: 40S ribosomal protein S25 [Sesamum indicum] ref|XP_011092807.1| PREDI | |||||
| JMFN031M20 | Sequence | 510 | 007586 (6) | ref|XP_011088427.1| | 1e-41 | PREDICTED: 40S ribosomal protein S25 [Sesamum indicum] ref|XP_011092807.1| PREDI | |||||
| JMFS025D03 | Sequence | 526 | 007586 (6) | ref|XP_011088427.1| | 1e-41 | PREDICTED: 40S ribosomal protein S25 [Sesamum indicum] ref|XP_011092807.1| PREDI | |||||
| JMSF016N01 | Sequence | 236 | 007586 (6) | ref|XP_009616279.1| | 5e-04 | PREDICTED: 40S ribosomal protein S25 [Nicotiana tomentosiformis] ref|XP_00958990 | 479 | 007586 (6) | ref|XP_011088427.1| | 4e-42 | PREDICTED: 40S ribosomal protein S25 [Sesamum indicum] ref|XP_011092807.1| PREDI |
This contig is upended
. : . : . : . : . : . :
JMFN031M20+ GATCAGAATCAAATGCTCATAGTAGCCACATCAA
____________________________________________________________
consensus GATCAGAATCAAATGCTCATAGTAGCCACATCAA
. : . : . : . : . : . :
rJMSF016N01- AACATAAAACACAATACAGTCACATGGCC
JMFN031M20+ AGTCTCATCAATTTAGGACAAAATAAAGTTAAACATAAAACACAATACAGTCACATGGCC
____________________________________________________________
consensus AGTCTCATCAATTTAGGACAAAATAAAGTTAAACATAAAACACAATACAGTCACATGGCC
. : . : . : . : . : . :
rJMSF016N01- TGATAACTGAACCAACATTTTTCACTCCCTAAGAAACTAAATTTGCAAAATTTAGGTATT
JMFN004D21+ CAAAATTTAGGTATT
rJMFF009F23- CAAAATTTAGGTATT
JMFN031M20+ TGATAACTGAACCAACATTTTTCACTCCCTAAGAAACTAAATTTGCAAAATTTAGGTATT
JMFS025D03+ CAAAATTTAGGTATT
____________________________________________________________
consensus TGATAACTGAACCAACATTTTTCACTCCCTAAGAAACTAAATTTGCAAAATTTAGGTATT
. : . : . : . : . : . :
rJMSF016N01- TGTAGCCCTGGTGTATATCTGCTGGCTGGCATGTGCTGACACCATCCTGATCAAACCTCT
JMFN004D21+ TGTAGCCCTGGTGTATATCTGCTGGCTGGCATGTGCTGACACCATCCTGATCAAACCTCT
rJMFF009F23- TGTAGCCCTGGTGTATATCTGCTGGCTGGCATGTGCTGACACCATCCTGATCAAACCTCT
JMFN031M20+ TGTAGCCCTGGTGTATATCTGCTGGCTGGCATGTGCTGACACCATCCTGATCAAACCTCT
JMFS025D03+ TGTAGCCCTGGTGTATATCTGCTGGCTGGCATGTGCTGACACCATCCTGATCAAACCTCT
____________________________________________________________
consensus TGTAGCCCTGGTGTATATCTGCTGGCTGGCATGTGCTGACACCATCCTGATCAAACCTCT
. : . : . : . : . : . :
rJMSF016N01- TGCCATCAATTCACGGATTGCCCTTCTTGCAAGTGATCCGCTGATCCTCAAACGGTCGGA
JMFN004D21+ TGCCATCAATTCACGGATTGCCCTTCTTGCAAGTGATCCGCTGATCCTCAAACGGTCGGA
rJMFF009F23- TGCCATCAATTCACGGATTGCCCTTCTTGCAAGTGATCCGCTGATCCTCAAACGGTCGGA
JMFN031M20+ TGCCATCAATTCACGGATTGCCCTTCTTGCAAGTGATCCGCTGATCCTCAAACGGTCGGA
JMFS025D03+ TGCCATCAATTCACGGATTGCCCTTCTTGCAAGTGATCCGCTGATCCTCAAACGGTCGGA
____________________________________________________________
consensus TGCCATCAATTCACGGATTGCCCTTCTTGCAAGTGATCCGCTGATCCTCAAACGGTCGGA
. : . : . : . : . : . :
rJMSF016N01- AAGTACGGAAGGGGTGATAAGCTTGTATTTGGGAGCTTCGGTTAGAAGCTTGTCGTAGGT
JMFN004D21+ AAGTACGGAAGGGGTGATAAGCTTGTATTTGGGAGCTTCGGTTAGAAGCTTGTCGTAGGT
rJMFF009F23- AAGTACGGAAGGGGTGATAAGCTTGTATTTGGGAGCTTCGGTTAGAAGCTTGTCGTAGGT
JMSF016N01+ TGGGAGCTTCGGTTAGAAGCTTGTCGTAGGT
JMFN031M20+ AAGTACGGAAGGGGTGATAAGCTTGTATTTGGGAGCTTCGGTTAGAAGCTTGTCGTAGGT
JMFS025D03+ AAGTACGGAAGGGGTGATAAGCTTGTATTTGGGAGCTTCGGTTAGAAGCTTGTCGTAGGT
____________________________________________________________
consensus AAGTACGGAAGGGGTGATAAGCTTGTATTTGGGAGCTTCGGTTAGAAGCTTGTCGTAGGT
. : . : . : . : . : . :
rJMSF016N01- AGCCTTGTCGAAAAGCACCATGTTGTTCACCTTCTCCTTTTGCTTTCCCTTACTCCACTT
JMFN004D21+ AGCCTTGTCGAAAAGCACCATGTTGTTCACCTTCTCCTTTTGCTTTCCCTTACTCCACTT
rJMFF009F23- AGCCTTGTCGAAAAGCACCATGTTGTTCACCTTCTCCTTTTGCTTTCCCTTACTCCACTT
JMSF016N01+ AGCCTTGTCGAAAAGCACCATGTTGTTCACCTTCTCCTTTTGCTTTCCCTTACTCCACTT
JMFN031M20+ AGCCTTGTCGAAAAGCACCATGTTGTTCACCTTCTCCTTTTGCTTTCCCTTACTCCACTT
JMFS025D03+ AGCCTTGTCGAAAAGCACCATGTTGTTCACCTTCTCCTTTTGCTTTCCCTTACTCCACTT
____________________________________________________________
consensus AGCCTTGTCGAAAAGCACCATGTTGTTCACCTTCTCCTTTTGCTTTCCCTTACTCCACTT
. : . : . : . : . : . :
rJMSF016N01- CTTCTTCTTCTGCTTGCCACCACCGGACTTGGCGGGCTTAGAGGATGGAGGAGGAGCCTT
JMFN004D21+ CTTCTTCTTCTGCTTGCCACCACCGGACTTGGCGGGCTTAGAGGATGGAGGAGGAGCCTT
rJMFF009F23- CTTCTTCTTCTGCTTGCCACCACCGGACTTGGCGGGCTTAGAGGATGGAGGAGGAGCCTT
JMSF016N01+ CTTCTTCTTCTGCTTGCCACCACCGGACTTGGCGGGCTTAGAGGATGGAGGAGGAGCCTT
JMFN031M20+ CTTCTTCTTCTGCTTGCCACCACCGGACTTGGCGGGCTTAGAGGATGGAGGAGGAGCCTT
JMFS025D03+ CTTCTTCTTCTGCTTGCCACCACCGGACTTGGCGGGCTTAGAGGATGGAGGAGGAGCCTT
____________________________________________________________
consensus CTTCTTCTTCTGCTTGCCACCACCGGACTTGGCGGGCTTAGAGGATGGAGGAGGAGCCTT
. : . : . : . : . : . :
rJMSF016N01- ATCCTTCTTCGGTGCCAT
JMFN004D21+ ATCCTTCTTCGGTGCCATCGCAGACTGGAGAAGAAGCTGT
rJMFF009F23- ATCCTTCTTCGGTGCCAT
JMSF016N01+ ATCCTTCTTCGGTGCCAT
JMFN031M20+ ATCCTTCTTCGGTGCCATCGCAGACTGGAGAAGAAGCTGTAGAGGCTAGGGAATGA
JMFS025D03+ ATCCTTCTTCGGTGCCATCGCAGACTGGAGAAGAAGCTGTAGAGGCTAGGGAATGAGGCA
____________________________________________________________
consensus ATCCTTCTTCGGTGCCATCGCAGACTGGAGAAGAAGCTGTAGAGGCTAGGGAATGAGGCA