Contig 007584:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002P23Sequence248007584 (5)
JMFF019L06Sequence580007584 (5)ref|XP_006365559.1|8e-67PREDICTED: DNA replication licensing factor MCM3 homolog 2-like [Solanum tubero717013732 (3)ref|XP_011085257.1|7e-50PREDICTED: DNA replication licensing factor MCM3 homolog 2 [Sesamum indicum]
JMFF027D23Sequence605007584 (5)ref|XP_006365559.1|5e-72PREDICTED: DNA replication licensing factor MCM3 homolog 2-like [Solanum tubero628013732 (3)ref|XP_011085257.1|5e-28PREDICTED: DNA replication licensing factor MCM3 homolog 2 [Sesamum indicum]
JMFS022B05Sequence600007584 (5)ref|XP_006365559.1|8e-72PREDICTED: DNA replication licensing factor MCM3 homolog 2-like [Solanum tubero
JMSF043C22Sequence775007584 (5)ref|XP_006365559.1|2e-116PREDICTED: DNA replication licensing factor MCM3 homolog 2-like [Solanum tubero785013732 (3)ref|XP_011085257.1|1e-56PREDICTED: DNA replication licensing factor MCM3 homolog 2 [Sesamum indicum]

Alignment

This contig is upended


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JMSF043C22+                                                                      A
                      ____________________________________________________________
consensus                                                                        A
 
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JMSF043C22+           TCTTTGTACGTACATAGCCCATACTCCGTAACTAGCAAATTGCCACTATCATCCCGTGTT
                      ____________________________________________________________
consensus             TCTTTGTACGTACATAGCCCATACTCCGTAACTAGCAAATTGCCACTATCATCCCGTGTT
 
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JMSF043C22+           GGATAGACAGAGCCTGTCGGCAATCCCACATTGGATGTAATATCTCTGTAATCCCGGGTT
                      ____________________________________________________________
consensus             GGATAGACAGAGCCTGTCGGCAATCCCACATTGGATGTAATATCTCTGTAATCCCGGGTT
 
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JMSF043C22+           GTGAATTTGCTAGTCTCAGGACAGAAGTGGACACTCTTTACAACCTTTGGCCTCACCAGA
                      ____________________________________________________________
consensus             GTGAATTTGCTAGTCTCAGGACAGAAGTGGACACTCTTTACAACCTTTGGCCTCACCAGA
 
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JMSF043C22+           GAACATTTGGTAACAATGCCCTCAATGCAGACCATAGAACCAATGAAACTAGACAAAAGC
JMFF027D23+           GAACATTTGGTAACAATGCCCTCAATGCAGACCATAGAACCAATGAAACTAGACAAAAGC
JMFF019L06+                              CCTCAATGCAGACCATAGAACCAATGAAACTAGACAAAAGC
JMFS022B05+           GAACATTTGGTAACAATGCCCTCAATGCAGACCATAGAACCAATGAAACTAGACAAAAGC
                      ____________________________________________________________
consensus             GAACATTTGGTAACAATGCCCTCAATGCAGACCATAGAACCAATGAAACTAGACAAAAGC
 
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JMSF043C22+           TCCCTTGGGGTCACTCTCCTTGAAACAAAAGGGCCTGTCAATCCAACAAGCACTTGTTCT
JMFF027D23+           CCTCTTGGGGTCACTCTCCTTGAAACAAAAGGGCCTGTCAATCCAACAAGCACTTGTTCT
JMFF019L06+           TCCCTTGGGGTCACTCTCCTTGAAACAAAAGGGCCTGTCAATCCAACAAGCACTTGTTCT
JMFS022B05+           TCCCTTGGGGTCACTCTCCTTGAAACAAAAGGGCCTGTCAATCCAACAAGCACTTGTTCT
                      ____________________________________________________________
consensus             TCCCTTGGGGTCACTCTCCTTGAAACAAAAGGGCCTGTCAATCCAACAAGCACTTGTTCT
 
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JMSF043C22+           CCTTCCTTCAAGTACTTGGGACTGTGCACTCGGAACAAATCCGTTAATGCATCACATAAT
JMFF027D23+           CCTTCCTTCAAGTACTTGGGACTGTGCACTCGGAACAAATCCGTTAATGCATCACATAAT
JMFF019L06+           CCTTCCTTCAAGTACTTGGGACTGTGCACTCGGAACAAATCCGTTAATGCATCACATAAT
JMFS022B05+           CCTTCCTTCAAGTACTTGGGACTGTGCACTCGGAACAAATCCGTTAATGCATCACATAAT
                      ____________________________________________________________
consensus             CCTTCCTTCAAGTACTTGGGACTGTGCACTCGGAACAAATCCGTTAATGCATCACATAAT
 
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JMSF043C22+           GGTTGCATATACTCACTGGGATTCTGAAGAAGCCTGCGAGCCAAGTCAGAGCCTTCTCTG
JMFF027D23+           GGTTGCATATACTCACTGGGATTCTGAAGAAGCCTGCGAGCCAAGTCAGAGCCTTCTCTG
JMFF019L06+           GGTTGCATATACTCACTGGGATTCTGAAGAAGCCTGCGAGCCAAGTCAGAGCCTTCTCTG
JMFS022B05+           GGTTGCATATACTCACTGGGATTCTGAAGAAGCCTGCGAGCCAAGTCAGAGCCTTCTCTG
                      ____________________________________________________________
consensus             GGTTGCATATACTCACTGGGATTCTGAAGAAGCCTGCGAGCCAAGTCAGAGCCTTCTCTG
 
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JMSF043C22+           TCATTGTAGAAATCGTTTAGGTTTATAATGAAGCGATGTCGTTTGTTGTTGACCATGGAG
JMFF027D23+           TCATTGTAGAAATCGTTTAGGTTTATAATGAAGCGATGTCGTTTGTTGTTGACCATGGAG
JMFF019L06+           TCATTGTAGAAATCGTTTAGGTTTATAATGAAGCGATGTCGTTTGTTGTTGACCATGGAG
JMFS022B05+           TCATTGTAGAAATCGTTTAGGTTTATAATGAAGCGATGTCGTTTGTTGTTGACCATGGAG
                      ____________________________________________________________
consensus             TCATTGTAGAAATCGTTTAGGTTTATAATGAAGCGATGTCGTTTGTTGTTGACCATGGAG
 
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JMSF043C22+           TCGAATTGAGATTTGAATTGGGTGTCCAGCTCAGTTTGTTCAAAGAACTTGAGAAATGTT
JMFF027D23+           TCGAATTGAGATTTGAATTGGGTGTCCAGCTCAGTTTGTTCAAAGAACTTGAGAAATGTT
JMFF002P23+                                                             GAGAAATGTT
JMFF019L06+           TCGAATTGAGATTTGAATTGGGTGTCCAGCTCAGTTTGTTCAAAGAACTTGAGAAATGTT
JMFS022B05+           TCGAATTGAGATTTGAATTGGGTGTCCAGCTCAGTTTGTTCAAAGAACTTGAGAAATGTT
                      ____________________________________________________________
consensus             TCGAATTGAGATTTGAATTGGGTGTCCAGCTCAGTTTGTTCAAAGAACTTGAGAAATGTT
 
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JMSF043C22+           CGTTTGTGCGCCGCTCTGACTTCATCGCTTAGATCCATCTGTTCCGCTTCGTCTTTGCTC
JMFF027D23+           CGTTTGTGCGCCGCTCTGACTTCATCGCTTAGATCCATCTGTTCCGCTTCGTCTTTGCTC
JMFF002P23+           CGTTTGTGCGCCGCTCTGACTTCATCGCTTAGATCCATCTGTTCCGCTTCGTCTTTGCTC
JMFF019L06+           CGTTTGTGCGCCGCTCTGACTTCATCGCTTAGATCCATCTGTTCCGCTTCGTCTTTGCTC
JMFS022B05+           CGTTTGTGCGCCGCTCTGACTTCATCGCTTAGATCCATCTGTTCCGCTTCGTCTTTGCTC
                      ____________________________________________________________
consensus             CGTTTGTGCGCCGCTCTGACTTCATCGCTTAGATCCATCTGTTCCGCTTCGTCTTTGCTC
 
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JMSF043C22+           TTTCTGTGCTAGGTGAGCAATATCTGACGAGAGCCAGAAAAAAACACAACTAGGGTTAGC
JMFF027D23+           TTTCTGTGCTAGGTGAGCAATATCTGACGAGAGCCAGAAAAAAACACAACTAGGGTTAGC
JMFF002P23+           TTTCTGTGCTAGGTGAGCAATATCTGACGAGAGCCAGAAAAAAACACAACTAGGGTTAGC
JMFF019L06+           TTTCTGTGCTAGGTGAGCAATATCTGACGAGAGCCAGAAAAAAACACAACTAGGGTTAGC
JMFS022B05+           TTTCTGTGCTAGGTGAGCAATATCTGACGAGAGCCAGAAAAAAACACAACTAGGGTTAGC
                      ____________________________________________________________
consensus             TTTCTGTGCTAGGTGAGCAATATCTGACGAGAGCCAGAAAAAAACACAACTAGGGTTAGC
 
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JMSF043C22+           CAAAGTCGCGTGACGCTTGGCGAAGATCCAAAGTCGACAACGAGAACAGGCGAAGTGCAA
JMFF027D23+           CAAAGTCGCGTGACGCTTGGCGAAGATCCAAAGTCGACAACGAGAACAGGCGAAGTGCAA
JMFF002P23+           CAAAGTCGCGTGACGCTTGGCGAAGATCCAAAGTCGACAACGAGAACAGGCGAAGTGCAA
JMFF019L06+           CAAAGTCGCGTGACGCTTGGCGAAGATCCAAAGTCGACAACGAGAACAGGCGAAGTGCAA
JMFS022B05+           CAAAGTCGCGTGACGCTTGGCGAAGATCCAAAGTCGACAACGAGAACAGGCGAAGTGCAA
                      ____________________________________________________________
consensus             CAAAGTCGCGTGACGCTTGGCGAAGATCCAAAGTCGACAACGAGAACAGGCGAAGTGCAA
 
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JMSF043C22+           TGAGCGACCGGCGACGAGTGTGTGTCGTCTGACAAGCTGCAACTCTGAAATCC       
JMFF027D23+           TGAGCGACCGGCGACGAGTGTGTGTCGTCTGACAAGCTGCAACTCTGAAATCCA      
JMFF002P23+           TGAGCGACCGGCGACGAGTGTGTGTCGTCTGACAAGCTGCAACTCTGAAATCCA      
JMFF019L06+           TGAGCGACCGGCGACGAGTGTGTGTCGTCTGACAAGCTGCAACTCTGAAATCCA      
JMFS022B05+           TGAGCGACCGGCGACGAGTGTGTGTCGTCTGACAAGCTGCAACTCTGAAATCCAAATGTG
                      ____________________________________________________________
consensus             TGAGCGACCGGCGACGAGTGTGTGTCGTCTGACAAGCTGCAACTCTGAAATCCAAATGTG