Contig 007582:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN016I13Sequence604007582 (3)
JMFS020D02Sequence637007582 (3)
JMFS124A08Sequence575007582 (3)

Alignment

This contig is upended


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JMFN016I13+               CAGACAAGCAATATGATCAAGCAAGGATAGCAACACCGCCATGGCTGCAAAATTCC
                      ____________________________________________________________
consensus                 CAGACAAGCAATATGATCAAGCAAGGATAGCAACACCGCCATGGCTGCAAAATTCC
 
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JMFN016I13+           AGTTGCNCCGCCAAGATACGGCTCACTTCTTCCTTATTCAATCAGATCAAGATATTTGTC
                      ____________________________________________________________
consensus             AGTTGCNCCGCCAAGATACGGCTCACTTCTTCCTTATTCAATCAGATCAAGATATTTGTC
 
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JMFN016I13+           ATCACTGCCTACATATCAACCGGAACCAACAATGTTTTTGTTTTGTTTTGTATGTTCTCA
                      ____________________________________________________________
consensus             ATCACTGCCTACATATCAACCGGAACCAACAATGTTTTTGTTTTGTTTTGTATGTTCTCA
 
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JMFN016I13+           TTGCAGCTAAAATGCAGTAAATTATTTACCCAGTATTAAGAAACAGAATGATGAATGATA
                      ____________________________________________________________
consensus             TTGCAGCTAAAATGCAGTAAATTATTTACCCAGTATTAAGAAACAGAATGATGAATGATA
 
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JMFN016I13+           TATATATGTTGTTTGTTGTTGTAATGAAATATTTGGCTGTTGCATGTGGACAAAACCTAA
                      ____________________________________________________________
consensus             TATATATGTTGTTTGTTGTTGTAATGAAATATTTGGCTGTTGCATGTGGACAAAACCTAA
 
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JMFN016I13+           AGGAATCACTGAAGCATAGAGAGGGGCAACCGCCATAGAAACACCCAAATCTCTCTACAC
                      ____________________________________________________________
consensus             AGGAATCACTGAAGCATAGAGAGGGGCAACCGCCATAGAAACACCCAAATCTCTCTACAC
 
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JMFN016I13+           CCTCATTCTTGTGCGGTAACAGGGATCAGACGAAATCTGATTAATAAGCTTTACCATATG
                      ____________________________________________________________
consensus             CCTCATTCTTGTGCGGTAACAGGGATCAGACGAAATCTGATTAATAAGCTTTACCATATG
 
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JMFN016I13+           AGCAGATTGTGGCTACAATCTAATAGTCAAGGGACCAAAATGCAATTAACTCTTTAGGCA
JMFS020D02+                                  TAGTCAAGGGACCAAAATGCAATTAACTCTTTAGGCA
                      ____________________________________________________________
consensus             AGCAGATTGTGGCTACAATCTAATAGTCAAGGGACCAAAATGCAATTAACTCTTTAGGCA
 
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JMFN016I13+           AATCACTTGCCAACAGAAATTAGGCTCAGATTTGGTAATGGAGAAGCCATACCGCCATGG
JMFS124A08+                                  GCTCAGATTTGGTAATGGAGAAGCCATACCGCCATGG
JMFS020D02+           AATCACTTGCCAACAGAAATTAGGCTCAGATTTGGTAATGGAGAAGCCATACCGCCATGG
                      ____________________________________________________________
consensus             AATCACTTGCCAACAGAAATTAGGCTCAGATTTGGTAATGGAGAAGCCATACCGCCATGG
 
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JMFN016I13+           CTGCAGACCTAGAGGTCGCCCCGCCAAGATACGGGTCGGATCCCTCCATACCCGATGAAC
JMFS124A08+           CTGCAGACCTAGAGGTCGCCCCGCCAAGATACGGGTCGGATCCCTCCATACCCGATGAAC
JMFS020D02+           CTGCAGACCTAGAGGTCGCCCCGCCAAGATACGGGTCGGATCCCTCCATACCCGATGAAC
                      ____________________________________________________________
consensus             CTGCAGACCTAGAGGTCGCCCCGCCAAGATACGGGTCGGATCCCTCCATACCCGATGAAC
 
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JMFN016I13+           TGTAGAAA                                                    
JMFS124A08+           TGTAGAAATATCATCATCATCACAGCCTACATAACCAATAATAATAATAATAATAATAAT
JMFS020D02+           TGTAGAAATATCATCATCATCACAGCCTACATAACCAATAATAATAATAATAATAATAAT
                      ____________________________________________________________
consensus             TGTAGAAATATCATCATCATCACAGCCTACATAACCAATAATAATAATAATAATAATAAT
 
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JMFS124A08+           AATAATAATAATAATAATAATAATAATAATAACACCGAAGATCTGAACAGGCAACCGAAG
JMFS020D02+           AATAATAATAATAATAATAATAATAATAATAACACCGAAGATCTGAACAGGCAACCGAAG
                      ____________________________________________________________
consensus             AATAATAATAATAATAATAATAATAATAATAACACCGAAGATCTGAACAGGCAACCGAAG
 
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JMFS124A08+           ATCTGAAGGTTCAAGCAGATCAAGAATGGCTACCCATAAGATAAGCCATAAAAGGTTCAT
JMFS020D02+           ATCTGAAGGTTCAAGCAGATCAAGAATGGCTACCCATAAGATAAGCCATAAAAGGTTCAT
                      ____________________________________________________________
consensus             ATCTGAAGGTTCAAGCAGATCAAGAATGGCTACCCATAAGATAAGCCATAAAAGGTTCAT
 
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JMFS124A08+           AGCGTTGCAGTTGATGAATGGTGAATGTATGATGATGATGATGATTCATTGAATACACAG
JMFS020D02+           AGCGTTGCAGTTGATGAATGGTGAATGTATGATGATGATGATGATTCATTGAATACACAG
                      ____________________________________________________________
consensus             AGCGTTGCAGTTGATGAATGGTGAATGTATGATGATGATGATGATTCATTGAATACACAG
 
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JMFS124A08+           AAACCAGCAGACCCAGAAGGGCGGCCATTAGCCCGCACCATTCTGGGCAATGATTCATCA
JMFS020D02+           AAACCAGCAGACCCAGAAGGGCGGCCATTAGCCCGCACCATTCTGGGCAATGATTCATCA
                      ____________________________________________________________
consensus             AAACCAGCAGACCCAGAAGGGCGGCCATTAGCCCGCACCATTCTGGGCAATGATTCATCA
 
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JMFS124A08+           GAAACGTTAACCGACAATTAGGGCTGTTGATTGTTGATGAAAGATGAAATCATCGGCATG
JMFS020D02+           GAAACGTTAACCGACAATTAGGGCTGTTGATTGTTGATGAAAGATGAAATCATCGGCATG
                      ____________________________________________________________
consensus             GAAACGTTAACCGACAATTAGGGCTGTTGATTGTTGATGAAAGATGAAATCATCGGCATG
 
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JMFS124A08+           CAGAGACGGTCAACCACCCTGAGAAATCCCGGCAAATCTCCGCAACCTCATTCTTTCTAC
JMFS020D02+           CAGAGACGGTCAACCACCCTGAGAAATCCCGGCAAATCTCCGCAACCTCATTCTTTCTAC
                      ____________________________________________________________
consensus             CAGAGACGGTCAACCACCCTGAGAAATCCCGGCAAATCTCCGCAACCTCATTCTTTCTAC
 
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JMFS124A08+           ATTCATCCAAGGAGATTATCACCCATGCAGGGCTCCTTAATATCAATCGTTATATCCT  
JMFS020D02+           ATTCATCCAAGGAGATTATCACCCATGCAGGGCTCCTTAATATCAATCGTTATATCCTGC
                      ____________________________________________________________
consensus             ATTCATCCAAGGAGATTATCACCCATGCAGGGCTCCTTAATATCAATCGTTATATCCTGC