Contig 007581:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS018G05Sequence588007581 (2)ref|XP_007035527.1|4e-62Always early, putative isoform 3 [Theobroma cacao] gb|EOY06453.1| Always early,
JMFS152F08Sequence614007581 (2)ref|XP_007035527.1|5e-69Always early, putative isoform 3 [Theobroma cacao] gb|EOY06453.1| Always early,

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS152F08+ GAACTTTACCCCGAGCCCGCT
                      ____________________________________________________________
consensus GAACTTTACCCCGAGCCCGCT
 
. : . : . : . : . : . :
JMFS152F08+ TTTGAGGTTTTTGAGATGTCCCTGCACCCTCATTGCTTTCTTGTTCACTATCACTTCCAG
JMFS018G05+ GAGATGTCCCTGCACCCTCATGGCTTTCTTGTTCACTATCACTTCCAG
                      ____________________________________________________________
consensus TTTGAGGTTTTTGAGATGTCCCTGCACCCTCATTGCTTTCTTGTTCACTATCACTTCCAG
 
. : . : . : . : . : . :
JMFS152F08+ CCAAATTGCAATAGTGATCAGTCATCATTGCAATCAACCCAACAACAGAAGCAGTCCCCT
JMFS018G05+ CCAAATTGCAATAGTGATCAGTCATCATTGCAATCAACCCAACAACAGAAGCAGTCCCCT
                      ____________________________________________________________
consensus CCAAATTGCAATAGTGATCAGTCATCATTGCAATCAACCCAACAACAGAAGCAGTCCCCT
 
. : . : . : . : . : . :
JMFS152F08+ CAGGAAGAGATAAGTAAGCCCTATTCATGGTGTAAAGTGCCTCCACCATATCAACTGATC
JMFS018G05+ CAGGAAGAGATAAGTAAGCCCTATTCATGGTGTAAAGTGCCTCCACCATATCAACTGATC
                      ____________________________________________________________
consensus CAGGAAGAGATAAGTAAGCCCTATTCATGGTGTAAAGTGCCTCCACCATATCAACTGATC
 
. : . : . : . : . : . :
JMFS152F08+ GGTTTCGCACTGCAGCAGCCACCTTTTTCCAATCTTTACCATATTTCCTGTATGCATCAT
JMFS018G05+ GGTTTCGCACTGCAGCAGCCACCTTTTTCCAATCTTTACCATATTTCCTGTATGCATCAT
                      ____________________________________________________________
consensus GGTTTCGCACTGCAGCAGCCACCTTTTTCCAATCTTTACCATATTTCCTGTATGCATCAT
 
. : . : . : . : . : . :
JMFS152F08+ AAAAACGACCCAGCTCTTCCTTATTCCACTGAGGGCCCAGCATAGACAACTTCCTTTTCC
JMFS018G05+ AAAAACGACCCAGCTCTTCCTTATTCCACTGAGGGCCCAGCATAGACAACTTCCTTTTCC
                      ____________________________________________________________
consensus AAAAACGACCCAGCTCTTCCTTATTCCACTGAGGGCCCAGCATAGACAACTTCCTTTTCC
 
. : . : . : . : . : . :
JMFS152F08+ GTTGGTTGCTTCTTTTAGACATATCTCCATCTTTGTTGGGCGAGACTTCATTTACACAAG
JMFS018G05+ GTTGGTTGCTTCTTTTAGACATATCTCCATCTTTGTTGGGCGAGACTTCATTTACACAAG
                      ____________________________________________________________
consensus GTTGGTTGCTTCTTTTAGACATATCTCCATCTTTGTTGGGCGAGACTTCATTTACACAAG
 
. : . : . : . : . : . :
JMFS152F08+ AGTATCGTTTGTTGACACTCCTTGATTTTCTTGCAGGAGACATAATTCAATCCGATTTAC
JMFS018G05+ AGTATCGTTTGTTGACACTCCTTGATTTTCTTGCAGGAGACATAATTCAATCCGATTTAC
                      ____________________________________________________________
consensus AGTATCGTTTGTTGACACTCCTTGATTTTCTTGCAGGAGACATAATTCAATCCGATTTAC
 
. : . : . : . : . : . :
JMFS152F08+ CGAATTGGAAATTCCTCGGAATCGAATTCAGATTTCACACCATGGGAAACGAAGATCGAG
JMFS018G05+ CGAATTGGAAATTCCTCGGAATCGAATTCAGATTTCACACCATGGGAAACGAAGATCGAG
                      ____________________________________________________________
consensus CGAATTGGAAATTCCTCGGAATCGAATTCAGATTTCACACCATGGGAAACGAAGATCGAG
 
. : . : . : . : . : . :
JMFS152F08+ CAGAGTTGGAGCTCAGAGGCGATTGGAGAAAACGGAATTGCGATTGGCTACAGAGGATTT
JMFS018G05+ CAGAGTTGGAGCTCAGAGGCGATTGGAGAAAACGGAATTGCGATTGGCTACAGAGGATTT
                      ____________________________________________________________
consensus CAGAGTTGGAGCTCAGAGGCGATTGGAGAAAACGGAATTGCGATTGGCTACAGAGGATTT
 
. : . : . : . : . : . :
JMFS152F08+ TTTGGTGGGCGAGTAGGACGCGGAGAAGAAGATGAATTTTTTGGGGCAGTAAC
JMFS018G05+ TTTGGTGGGCGAGTAGGACGCGGAGAAGAAGATGAATTTTTTGGGGCAGTAACCGCGAAA
                      ____________________________________________________________
consensus TTTGGTGGGCGAGTAGGACGCGGAGAAGAAGATGAATTTTTTGGGGCAGTAACCGCGAAA