Contig 007579:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046K24Sequence547007579 (6)ref|XP_009775359.1|4e-11PREDICTED: patellin-3-like [Nicotiana sylvestris]537024417ref|XP_009617344.1|2e-35PREDICTED: patellin-3-like [Nicotiana tomentosiformis]
JMFS015G12Sequence529007579 (6)ref|XP_009775359.1|2e-11PREDICTED: patellin-3-like [Nicotiana sylvestris]
JMFS067H09Sequence626007579 (6)ref|XP_009775359.1|1e-11PREDICTED: patellin-3-like [Nicotiana sylvestris]
JMFS077C05Sequence622007579 (6)ref|XP_009775359.1|2e-11PREDICTED: patellin-3-like [Nicotiana sylvestris]
JMFS110C04Sequence625007579 (6)ref|XP_009775359.1|6e-12PREDICTED: patellin-3-like [Nicotiana sylvestris]
JMFS149B07Sequence492007579 (6)ref|XP_009775359.1|1e-11PREDICTED: patellin-3-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS067H09+               CGTCGCTGCGTTCGTCGGCGAGGAGGGGAATTCCCCAGATGGAAACCTCTTCCGGT
JMFS110C04+           ATCACGTCGCTGCGTTCGTCGGCGAGGAGGGGAATTCCCCAGATGGAAACCTCTTCCGGT
                      ____________________________________________________________
consensus             ATCACGTCGCTGCGTTCGTCGGCGAGGAGGGGAATTCCCCAGATGGAAACCTCTTCCGGT
 
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JMFS067H09+           ACTGGTGGGGGGGGCTTCTTCTTCCTTTTCCTCCTCGCCGGCGCCGCCGTCGNCGGCGGC
JMFS110C04+           ACTGGT-GGGGGGGCTTCTTCTTCCTTTTCCTCCTCGCCGGCGCCGCCGTCGGCGGCGGC
                      ____________________________________________________________
consensus             ACTGGTGGGGGGGGCTTCTTCTTCCTTTTCCTCCTCGCCGGCGCCGCCGTCGGCGGCGGC
 
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JMFS067H09+           GGCGGCGGGGGCTGGCTCTTCCGCCGGTGGGGCTGCGGCGGCTACTTCCACGATGGTCTC
JMFS110C04+           GGCGGCGGGGGCTGGCTCTTCCGCCGGTGGGGCTGCGGCGGCTACTTCCACGATGGTCTC
                      ____________________________________________________________
consensus             GGCGGCGGGGGCTGGCTCTTCCGCCGGTGGGGCTGCGGCGGCTACTTCCACGATGGTCTC
 
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JMFS067H09+           CTTGATTTCCTCCGCCGGTGGGGCGGCCTTTTCGTCGACGACAACCACCGCGGGCTCCGC
JMFS110C04+           CTTGATTTCCTCCGCCGGTGGGGCGGCCTTTTCGTCGACGACAACCACCGCGGGCTCCGC
                      ____________________________________________________________
consensus             CTTGATTTCCTCCGCCGGTGGGGCGGCCTTTTCGTCGACGACAACCACCGCGGGCTCCGC
 
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JMFS067H09+           CGGCGCCTCCTCCGTGGGTGGCGGTGGTGGAGCGGTTTTCTCCTCCTCCTCTTTCTTTTC
JMFS110C04+           CGGCGCCTCCTCCGTGGGTGGCGGTGGTGGAGCGGTTTTCTCCTCCTCCTCTTTCTTTTC
                      ____________________________________________________________
consensus             CGGCGCCTCCTCCGTGGGTGGCGGTGGTGGAGCGGTTTTCTCCTCCTCCTCTTTCTTTTC
 
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JMFS067H09+           CGCCTCCTTGGGTGCTGATTCTGGCTCCGGGGCGGCGGCGGGTGGGGCCGCCACCTCTTC
JMFS110C04+           CGCCTCCTTGGGTGCTGATTCTGGCTCCGGGGCGGCGGCGGGTGGGGCCGCCACCTCTTC
JMFF046K24+                             TTCTGGCTCCGGGGCGGCGGCGGGTGGGGCCGCCA-CTCTTC
                      ____________________________________________________________
consensus             CGCCTCCTTGGGTGCTGATTCTGGCTCCGGGGCGGCGGCGGGTGGGGCCGCCACCTCTTC
 
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JMFS067H09+           TGTTTTCTCTTCGGCCTTGGGTGGCTCCTCCGCCGCCGCCGGAGCGTCGGCCGGTGCAGC
JMFS110C04+           TGTTTTCTCTTCGGCCTTGGGTGGCTCCTCCGCCGCCGCCGGAGCGTCGGCCGGTGCAGC
JMFF046K24+           TG-TTTCTCTTCGGCCTTGGGGGGCTCCTCCGCCGCCGCCGGAGCGTCGGCCGGTGCAGC
JMFS149B07+                                                        GTCGGCCGGTGCAGC
JMFS015G12+                      CGGCCTTGGGTGGCTCCTCCGCCGCCGCCGGAGCGTCGGCCGGTGCAGC
                      ____________________________________________________________
consensus             TGTTTTCTCTTCGGCCTTGGGTGGCTCCTCCGCCGCCGCCGGAGCGTCGGCCGGTGCAGC
 
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JMFS067H09+           CTCAGTTTCCTTACTCTCACTCTCAGCGGGTTTCTTCTCCTCCTCCTTCGCCGGCGCCGG
JMFS110C04+           CTCAGTTTCCTTACTCTCACTCTCAGCGGGTTTCTTCTCCTCCTCCTTCGCCGGCGCCGG
JMFF046K24+           CTCAGTTTCCTTACTCTCACTCTCAGCGGGTTTCTTCTCCTCCTCCTTCGCCGGCGCCGG
JMFS149B07+           CTCAGTTTCCTTACTCTCACTCTCAGCGGGTTTCTTCTCCTCCTCCTTCGCCGGCGCCGG
JMFS015G12+           CTCAGTTTCCTTACTCTCACTCTCAGCGGGTTTCTTCTCCTCCTCCTTCGCCGGCGCCGG
                      ____________________________________________________________
consensus             CTCAGTTTCCTTACTCTCACTCTCAGCGGGTTTCTTCTCCTCCTCCTTCGCCGGCGCCGG
 
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JMFS067H09+           CGGCGGCGGCGGCGGCGGCGGAGCAGTAAACTCGTGCTTGTTCAAAGCCTCCTGAATCAA
JMFS110C04+           CGGCGGCGGCGGCGGCGGCGGAGCAGTAAACTCGTGCTTGTTCAAAGCCTCCTGAATCAA
JMFF046K24+           CGGCGGCGGCGGCGGCGGCGGAGCAGTAAACTCGTGCTTGTTCAAAGCCTCCTGAATCAA
JMFS077C05+                                    GTAAACTCGTGCTTGTTCAAAGCCTCCTGAATCAA
JMFS149B07+           CGGCGGCGGCGGCGGCGGCGGAGCAGTAAACTCGTGCTTGTTCAAAGCCTCCTGAATCAA
JMFS015G12+           CGGCGGCGGCGGCGGCGGCGGAGCAGTAAACTCGTGCTTGTTCAAAGCCTCCTGAATCAA
                      ____________________________________________________________
consensus             CGGCGGCGGCGGCGGCGGCGGAGCAGTAAACTCGTGCTTGTTCAAAGCCTCCTGAATCAA
 
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JMFS067H09+           CTGCTTAAACTCATCCAAAGCTTTCTTCTCCGGGTTCGGAAGCTCCTCCACCTTATTACT
JMFS110C04+           CTGCTTAAACTCATCCAAAGCTTTCTTCTCCGGGTTCGGAAGCTCCTCCACCTTATTACT
JMFF046K24+           CTGCTTAAACTCATCCAAAGCTTTCTTCTCCGGGTTCGGAAGCTCCTCCACCTTATTACT
JMFS077C05+           CTGCTTAAACTCATCCAAAGCTTTCTTCTCCGGGTTCGGAAGCTCCTCCACCTTATTACT
JMFS149B07+           CTGCTTAAACTCATCCAAAGCTTTCTTCTCCGGGTTCGGAAGCTCCTCCACCTTATTACT
JMFS015G12+           CTGCTTAAACTCATCCAAAGCTTTCTTCTCCGGGTTCGGAAGCTCCTCCACCTTATTACT
                      ____________________________________________________________
consensus             CTGCTTAAACTCATCCAAAGCTTTCTTCTCCGGGTTCGGAAGCTCCTCCACCTTATTACT
 
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JMFS067H09+           CTCCTCCTTAAACGACGTCGA                                       
JMFS110C04+           CTCCTCCTTAAACGACGTCGATTCTG                                  
JMFF046K24+           CTCCTCCTTAAACGACGTCGATTCTGCAACACCACTCTTCTCCTTCTCACCTTCCACCAC
JMFS077C05+           CTCCTCCTTAAACGACGTCGATTCTGCAACACCACTCTTCTCCTTCTCACCTTCCACCAC
JMFS149B07+           CTCCTCCTTAAACGACGTCGATTCTGCAACACCACTCTTCTCCTTCTCACCTTCCACCAC
JMFS015G12+           CTCCTCCTTAAACGACGTCGATTCTGCAACACCACTCTTCTCCTTCTCACCTTCCACCAC
                      ____________________________________________________________
consensus             CTCCTCCTTAAACGACGTCGATTCTGCAACACCACTCTTCTCCTTCTCACCTTCCACCAC
 
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JMFF046K24+           CACCGCTTCTCCG                                               
JMFS077C05+           CACCGCTTCTCCGGCGGCCTCGGGTTCAGCCTCCTTCTCCACAACCGCCGGAGCCTCCGG
JMFS149B07+           CACCGCTTCTCCGGCGGCCTCGGGTTCAGCCTCCTTCTCCACAACCGCCGGAGCCTCCGG
JMFS015G12+           CACCGCTTCTCCGGCGGCCTCGGGTTCAGCCTCCTTCTCCACAACCGCCGGAGCCTCCGG
                      ____________________________________________________________
consensus             CACCGCTTCTCCGGCGGCCTCGGGTTCAGCCTCCTTCTCCACAACCGCCGGAGCCTCCGG
 
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JMFS077C05+           CTTCTCCGCTACCGGCACATCGGAAACCACCACCTCCTCGGCAGCGGCAGCAGGTGCTTT
JMFS149B07+           CTTCTCCGCTACCGGCACATCGGAAACCACCACCTCCTCGGCAGCGGCAGCAGGTGCTTT
JMFS015G12+           CTTCTCCGCTACCGGCACATCGGAAACCACCACCTCCTCGGCAGCGGCAGCAGGTGCTTT
                      ____________________________________________________________
consensus             CTTCTCCGCTACCGGCACATCGGAAACCACCACCTCCTCGGCAGCGGCAGCAGGTGCTTT
 
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JMFS077C05+           AGTTTCCTCAGCCATATCAGATCAGTGAATTAAAATTAAAATTAAAATTAAAACTGAAAT
JMFS149B07+           AGTTTCCTCAGCCATATCAGATCAGTGAATTAAAATTAAAATTAAAATTAAAACTGAAAT
JMFS015G12+           AGTTTCCTCAGCCATATCAGATCAGTGAATTAAAATTAAAATTAAAATTAAAACTGAAAT
                      ____________________________________________________________
consensus             AGTTTCCTCAGCCATATCAGATCAGTGAATTAAAATTAAAATTAAAATTAAAACTGAAAT
 
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JMFS077C05+           ATAAATCAAAGAAAACCCAAGAAAATGAGAATTCAAGATTTCTTTTTTTTGAA       
JMFS149B07+           ATAAATCAAAGAAAACCCAAGAAAATGAGAATTCAAGATTTCTTTTTTTTGAA       
JMFS015G12+           ATAAATCAAAGAAAACCCAAGAAAATGAGAATTCAAGATTTCTTTTTTTTGAAGAAAGAA
                      ____________________________________________________________
consensus             ATAAATCAAAGAAAACCCAAGAAAATGAGAATTCAAGATTTCTTTTTTTTGAAGAAAGAA