Contig 007577:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS012C06Sequence616007577 (3)ref|XP_009763178.1|8e-28PREDICTED: uncharacterized protein LOC104215125 isoform X1 [Nicotiana sylvestri
JMFS048H11Sequence612007577 (3)ref|XP_009763178.1|2e-40PREDICTED: uncharacterized protein LOC104215125 isoform X1 [Nicotiana sylvestri
JMFS136E12Sequence625007577 (3)ref|XP_009763178.1|3e-42PREDICTED: uncharacterized protein LOC104215125 isoform X1 [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS136E12+ ATCTTGCTGACTTGAAAAAT
                      ____________________________________________________________
consensus ATCTTGCTGACTTGAAAAAT
 
. : . : . : . : . : . :
JMFS136E12+ CAGAAAGCTTGAGCTGTTGTAATAGCTCCAAGGGCAGAATGTACGACTCAATACGCCTTC
JMFS048H11+ AAAGCTTGAGCTGTTGTAATAGCTCCAAGGGCAGAATGTACGACTCAATACGCCTTC
                      ____________________________________________________________
consensus CAGAAAGCTTGAGCTGTTGTAATAGCTCCAAGGGCAGAATGTACGACTCAATACGCCTTC
 
. : . : . : . : . : . :
JMFS136E12+ CAAGCTGTCCGGCAGCTACTCTCAACAACCCTCGTCGGACCCTGGAATCGGTTTGCTCCG
JMFS048H11+ CAAGCTGTCCGGCAGCTACTCTCAACAACCCTCGTCGGACCCTGGAATCGGTTTGCTCCG
JMFS012C06+ GAATCGGTTTGCTCCG
                      ____________________________________________________________
consensus CAAGCTGTCCGGCAGCTACTCTCAACAACCCTCGTCGGACCCTGGAATCGGTTTGCTCCG
 
. : . : . : . : . : . :
JMFS136E12+ AAACATTCATCTGAACCCTCATCAGCTCCCCAACGGTAGAGGCTCGTTTTCGACTTGCTG
JMFS048H11+ AAACATTCATCTGAACCCTCATCAGCTCCCCAACGGTAGAGGCTCGTTTTCGACTTGCTG
JMFS012C06+ AAACATTCATCTGAACCCTCATCAGCTCCCCAACGGTAGAGGCTCGTTTTCGACTTGCTG
                      ____________________________________________________________
consensus AAACATTCATCTGAACCCTCATCAGCTCCCCAACGGTAGAGGCTCGTTTTCGACTTGCTG
 
. : . : . : . : . : . :
JMFS136E12+ AGTTCTGAGTCTGATCCGCCGCCACCGCCGAATCGGAACGGTTCTTCTTCTTCGACTTAA
JMFS048H11+ AGTTCTGAGTCTGATCCGCCGCCACCGCCGAATCGGAACGGTTCTTCTTCTTCGACTTAA
JMFS012C06+ AGTTCTGAGTCTGATCCGCCGCCACCGCCGAATCGGAACGGTTCTTCTTCTTCGACTTAA
                      ____________________________________________________________
consensus AGTTCTGAGTCTGATCCGCCGCCACCGCCGAATCGGAACGGTTCTTCTTCTTCGACTTAA
 
. : . : . : . : . : . :
JMFS136E12+ ACCCAAGCGCCTTCTTCACCTTGCTCGCCGACGACGACTTCTGCAACGACTGCGAAGAAG
JMFS048H11+ ACCCAAGCGCCTTCTTCACCTTGCTCGCCGACGACGACTTCTGCAACGACTGCGAAGAAG
JMFS012C06+ ACCCAAGCGCCTTCTTCACCTTGCTCGCCGACGACGACTTCTGCAACGACTGCGAAGAAG
                      ____________________________________________________________
consensus ACCCAAGCGCCTTCTTCACCTTGCTCGCCGACGACGACTTCTGCAACGACTGCGAAGAAG
 
. : . : . : . : . : . :
JMFS136E12+ ACGAGGACGTGGAGTCCGACCTCTCGGAATTGGACACGAATTTCAACGGGCGACCCGAGG
JMFS048H11+ ACGAGGACGTGGAGTCCGACCTCTCGGAATTGGACACGAATTTCAACGGGCGACCCGAGG
JMFS012C06+ ACGAGGACGTGGAGTCCGACCTCTCGGAATTGGACACGAATTTCAACGGGCGACCCGAGG
                      ____________________________________________________________
consensus ACGAGGACGTGGAGTCCGACCTCTCGGAATTGGACACGAATTTCAACGGGCGACCCGAGG
 
. : . : . : . : . : . :
JMFS136E12+ CGGAGCTCCGGCAAGCCCCGACAACGATCTCGTAGGCGGTTTCCCGGAGCTCGGAATCCG
JMFS048H11+ CGGAGCTCCGGCAAGCCCCGACAACGATCTCGTAGGCGGTTTCCCGGAGCTCGGAATCCG
JMFS012C06+ CGGAGCTCCGGCAAGCCCCGACAACGATCTCGTAGGCGGTTTCCCGGAGCTCGGAATCCG
                      ____________________________________________________________
consensus CGGAGCTCCGGCAAGCCCCGACAACGATCTCGTAGGCGGTTTCCCGGAGCTCGGAATCCG
 
. : . : . : . : . : . :
JMFS136E12+ TGAATTCAACAGCCAATTGGCCAAAGGGGCTAGGAATGTGAGCGTCGTTTTGGGTTTCTT
JMFS048H11+ TGAATTCAACAGCCAATTGGCCAAAGGGGCTAGGAATGTGAGCGTCGTTTTGGGTTTCTT
JMFS012C06+ TGAATTCAACAGCCAATTGGCCAAAGGGGCTAGGAATGTGAGCGTCGTTTTGGGTTTCTT
                      ____________________________________________________________
consensus TGAATTCAACAGCCAATTGGCCAAAGGGGCTAGGAATGTGAGCGTCGTTTTGGGTTTCTT
 
. : . : . : . : . : . :
JMFS136E12+ GGTGGGAGTGCATCCTCAACTGCGCCTGAGCTTTTGCGTGTCGATTAGCAGAAGAAAGTG
JMFS048H11+ GGTGGGAGTGCATCCTCAACTGCGCCTGAGCTTTTGCGTGTCGATTAGCAGAAGAAAGTG
JMFS012C06+ GGTGGGAGTGCATCCTCAACTGCGCCTGAGCTTTTGCGTGTCGATTAGCAGAAGAAAGTG
                      ____________________________________________________________
consensus GGTGGGAGTGCATCCTCAACTGCGCCTGAGCTTTTGCGTGTCGATTAGCAGAAGAAAGTG
 
. : . : . : . : . : . :
JMFS136E12+ CATCCATAGCTGAGAATTAACATGAAGTAGAGAAATTGTAAGGATTGGGGAAAAAGTAGA
JMFS048H11+ CATCCATAGCTGAGAATTAACATGAAGTAGAGAAATTGTAAGGATTGGGGAAAAAGTAGA
JMFS012C06+ CATCCATAGCTGAGAATTAACATGAAGTAGAGAAATTGTAAGGATTGGGGAAAAAGTAGA
                      ____________________________________________________________
consensus CATCCATAGCTGAGAATTAACATGAAGTAGAGAAATTGTAAGGATTGGGGAAAAAGTAGA
 
. : . : . : . : . : . :
JMFS136E12+ GAGTG
JMFS048H11+ GAGTGGTATGATGGA
JMFS012C06+ GAGTGGTATGATGGATTGAAGAAGGGGTTGCTGGAGTTGAAACTTGAAAGGAAAGGAAGG
                      ____________________________________________________________
consensus GAGTGGTATGATGGATTGAAGAAGGGGTTGCTGGAGTTGAAACTTGAAAGGAAAGGAAGG
 
. : . : . : . : . : . :
JMFS012C06+ AATTATGTTAATTGAGGTGTGATAAGGAATAACGCGGGTGGAGTTTGGAATTTGGACTGC
                      ____________________________________________________________
consensus AATTATGTTAATTGAGGTGTGATAAGGAATAACGCGGGTGGAGTTTGGAATTTGGACTGC