Contig 007577:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS136E12+                                                   ATCTTGCTGACTTGAAAAAT
                      ____________________________________________________________
consensus                                                     ATCTTGCTGACTTGAAAAAT
 
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JMFS136E12+           CAGAAAGCTTGAGCTGTTGTAATAGCTCCAAGGGCAGAATGTACGACTCAATACGCCTTC
JMFS048H11+              AAAGCTTGAGCTGTTGTAATAGCTCCAAGGGCAGAATGTACGACTCAATACGCCTTC
                      ____________________________________________________________
consensus             CAGAAAGCTTGAGCTGTTGTAATAGCTCCAAGGGCAGAATGTACGACTCAATACGCCTTC
 
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JMFS136E12+           CAAGCTGTCCGGCAGCTACTCTCAACAACCCTCGTCGGACCCTGGAATCGGTTTGCTCCG
JMFS048H11+           CAAGCTGTCCGGCAGCTACTCTCAACAACCCTCGTCGGACCCTGGAATCGGTTTGCTCCG
JMFS012C06+                                                       GAATCGGTTTGCTCCG
                      ____________________________________________________________
consensus             CAAGCTGTCCGGCAGCTACTCTCAACAACCCTCGTCGGACCCTGGAATCGGTTTGCTCCG
 
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JMFS136E12+           AAACATTCATCTGAACCCTCATCAGCTCCCCAACGGTAGAGGCTCGTTTTCGACTTGCTG
JMFS048H11+           AAACATTCATCTGAACCCTCATCAGCTCCCCAACGGTAGAGGCTCGTTTTCGACTTGCTG
JMFS012C06+           AAACATTCATCTGAACCCTCATCAGCTCCCCAACGGTAGAGGCTCGTTTTCGACTTGCTG
                      ____________________________________________________________
consensus             AAACATTCATCTGAACCCTCATCAGCTCCCCAACGGTAGAGGCTCGTTTTCGACTTGCTG
 
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JMFS136E12+           AGTTCTGAGTCTGATCCGCCGCCACCGCCGAATCGGAACGGTTCTTCTTCTTCGACTTAA
JMFS048H11+           AGTTCTGAGTCTGATCCGCCGCCACCGCCGAATCGGAACGGTTCTTCTTCTTCGACTTAA
JMFS012C06+           AGTTCTGAGTCTGATCCGCCGCCACCGCCGAATCGGAACGGTTCTTCTTCTTCGACTTAA
                      ____________________________________________________________
consensus             AGTTCTGAGTCTGATCCGCCGCCACCGCCGAATCGGAACGGTTCTTCTTCTTCGACTTAA
 
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JMFS136E12+           ACCCAAGCGCCTTCTTCACCTTGCTCGCCGACGACGACTTCTGCAACGACTGCGAAGAAG
JMFS048H11+           ACCCAAGCGCCTTCTTCACCTTGCTCGCCGACGACGACTTCTGCAACGACTGCGAAGAAG
JMFS012C06+           ACCCAAGCGCCTTCTTCACCTTGCTCGCCGACGACGACTTCTGCAACGACTGCGAAGAAG
                      ____________________________________________________________
consensus             ACCCAAGCGCCTTCTTCACCTTGCTCGCCGACGACGACTTCTGCAACGACTGCGAAGAAG
 
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JMFS136E12+           ACGAGGACGTGGAGTCCGACCTCTCGGAATTGGACACGAATTTCAACGGGCGACCCGAGG
JMFS048H11+           ACGAGGACGTGGAGTCCGACCTCTCGGAATTGGACACGAATTTCAACGGGCGACCCGAGG
JMFS012C06+           ACGAGGACGTGGAGTCCGACCTCTCGGAATTGGACACGAATTTCAACGGGCGACCCGAGG
                      ____________________________________________________________
consensus             ACGAGGACGTGGAGTCCGACCTCTCGGAATTGGACACGAATTTCAACGGGCGACCCGAGG
 
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JMFS136E12+           CGGAGCTCCGGCAAGCCCCGACAACGATCTCGTAGGCGGTTTCCCGGAGCTCGGAATCCG
JMFS048H11+           CGGAGCTCCGGCAAGCCCCGACAACGATCTCGTAGGCGGTTTCCCGGAGCTCGGAATCCG
JMFS012C06+           CGGAGCTCCGGCAAGCCCCGACAACGATCTCGTAGGCGGTTTCCCGGAGCTCGGAATCCG
                      ____________________________________________________________
consensus             CGGAGCTCCGGCAAGCCCCGACAACGATCTCGTAGGCGGTTTCCCGGAGCTCGGAATCCG
 
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JMFS136E12+           TGAATTCAACAGCCAATTGGCCAAAGGGGCTAGGAATGTGAGCGTCGTTTTGGGTTTCTT
JMFS048H11+           TGAATTCAACAGCCAATTGGCCAAAGGGGCTAGGAATGTGAGCGTCGTTTTGGGTTTCTT
JMFS012C06+           TGAATTCAACAGCCAATTGGCCAAAGGGGCTAGGAATGTGAGCGTCGTTTTGGGTTTCTT
                      ____________________________________________________________
consensus             TGAATTCAACAGCCAATTGGCCAAAGGGGCTAGGAATGTGAGCGTCGTTTTGGGTTTCTT
 
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JMFS136E12+           GGTGGGAGTGCATCCTCAACTGCGCCTGAGCTTTTGCGTGTCGATTAGCAGAAGAAAGTG
JMFS048H11+           GGTGGGAGTGCATCCTCAACTGCGCCTGAGCTTTTGCGTGTCGATTAGCAGAAGAAAGTG
JMFS012C06+           GGTGGGAGTGCATCCTCAACTGCGCCTGAGCTTTTGCGTGTCGATTAGCAGAAGAAAGTG
                      ____________________________________________________________
consensus             GGTGGGAGTGCATCCTCAACTGCGCCTGAGCTTTTGCGTGTCGATTAGCAGAAGAAAGTG
 
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JMFS136E12+           CATCCATAGCTGAGAATTAACATGAAGTAGAGAAATTGTAAGGATTGGGGAAAAAGTAGA
JMFS048H11+           CATCCATAGCTGAGAATTAACATGAAGTAGAGAAATTGTAAGGATTGGGGAAAAAGTAGA
JMFS012C06+           CATCCATAGCTGAGAATTAACATGAAGTAGAGAAATTGTAAGGATTGGGGAAAAAGTAGA
                      ____________________________________________________________
consensus             CATCCATAGCTGAGAATTAACATGAAGTAGAGAAATTGTAAGGATTGGGGAAAAAGTAGA
 
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JMFS136E12+           GAGTG                                                       
JMFS048H11+           GAGTGGTATGATGGA                                             
JMFS012C06+           GAGTGGTATGATGGATTGAAGAAGGGGTTGCTGGAGTTGAAACTTGAAAGGAAAGGAAGG
                      ____________________________________________________________
consensus             GAGTGGTATGATGGATTGAAGAAGGGGTTGCTGGAGTTGAAACTTGAAAGGAAAGGAAGG
 
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JMFS012C06+           AATTATGTTAATTGAGGTGTGATAAGGAATAACGCGGGTGGAGTTTGGAATTTGGACTGC
                      ____________________________________________________________
consensus             AATTATGTTAATTGAGGTGTGATAAGGAATAACGCGGGTGGAGTTTGGAATTTGGACTGC