Contig 007576:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS004F05Sequence394007576 (4)ref|XP_008385382.1|5e-33PREDICTED: ABC transporter A family member 7-like [Malus domestica]
JMFS011C04Sequence627007576 (4)ref|XP_009615366.1|1e-48PREDICTED: ABC transporter A family member 7-like [Nicotiana tomentosiformis]
JMFS128E02Sequence626007576 (4)ref|XP_009615366.1|8e-60PREDICTED: ABC transporter A family member 7-like [Nicotiana tomentosiformis]
JMFS136C09Sequence601007576 (4)ref|XP_009615366.1|9e-56PREDICTED: ABC transporter A family member 7-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS128E02+                             AAGAATATCAGAGGAATTGAGAGTTGTGCCATTGAAAAAATT
JMFS136C09+                                                         CCATTGAAAAAATT
                      ____________________________________________________________
consensus                               AAGAATATCAGAGGAATTGAGAGTTGTGCCATTGAAAAAATT
 
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JMFS128E02+           CCCTCCAATACGTTCAGCAAATGTTTGATTTGCTCCAGTCAAGAGTATAGCAGCTGGACA
JMFS136C09+           CCCTCCAATACGTTCAGCAAATGTTTGATTTGCTCCAGTCAAGAGTATAGCAGCTGGACA
JMFS011C04+                                            TCCAGTCAAGAGTATAGCAGCTGGACA
                      ____________________________________________________________
consensus             CCCTCCAATACGTTCAGCAAATGTTTGATTTGCTCCAGTCAAGAGTATAGCAGCTGGACA
 
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JMFS128E02+           GGATCCAGTGGTCTTGCATGACTCTTCAGGCAAATCTTTGTATGTAATAAAATCATTTTG
JMFS136C09+           GGATCCAGTGGTCTTGCATGACTCTTCAGGCAAATCTTTGTATGTAATAAAATCATTTTG
JMFS011C04+           GGATCCAGTGGTCTTGCATGACTCTTCAGGCAAATCTTTGTATGTAATAAAATCATTTTG
                      ____________________________________________________________
consensus             GGATCCAGTGGTCTTGCATGACTCTTCAGGCAAATCTTTGTATGTAATAAAATCATTTTG
 
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JMFS128E02+           TACTGCACGATATTCTGGTCTTGGTATCTGTAACAAAGGAGGCCATTCTGGTGGACTAGG
JMFS136C09+           TACTGCACGATATTCTGGTCTTGGTATCTGTAACAAAGGAGGCCATTCTGGTGGACTAGG
JMFS011C04+           TACTGCACGATATTCTGGTCTTGGTATCTGTAACAAAGGAGGCCATTCTGGTGGACTAGG
                      ____________________________________________________________
consensus             TACTGCACGATATTCTGGTCTTGGTATCTGTAACAAAGGAGGCCATTCTGGTGGACTAGG
 
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JMFS128E02+           AAGTGGGCAGCTGGCTGCTTGTTCCAAAGTTGAGTACTCAATCCCACACTTTTTTTCACA
JMFS136C09+           AAGTGGGCAGCTGGCTGCTTGTTCCAAAGTTGAGTACTCAATCCCACACTTTTTTTCACA
JMFS004F05+                   AGCTGGCTGCTTGTTCCAAAGTTGAGTACTCAATCCCACACTTTTTTTCACA
JMFS011C04+           AAGTGGGCAGCTGGCTGCTTGTTCCAAAGTTGAGTACTCAATCCCACACTTTTTTTCACA
                      ____________________________________________________________
consensus             AAGTGGGCAGCTGGCTGCTTGTTCCAAAGTTGAGTACTCAATCCCACACTTTTTTTCACA
 
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JMFS128E02+           TTTTCCATCCCCATTAGTATCAATACAAATGCAGCCACACCTTCTTGAGGGCTTATCCAA
JMFS136C09+           TTTTCCATCCCCATTAGTATCAATACAAATGCAGCCACACCTTCTTGAGGGCTTATCCAA
JMFS004F05+           TTTTCCATCCCCATTAGTATCAATACAAATGCAGCCACACCTTCTTGAGGGCTTATCCAA
JMFS011C04+           TTTTCCATCCCCATTAGTATCAATACAAATGCAGCCACACCTTCTTGAGGGCTTATCCAA
                      ____________________________________________________________
consensus             TTTTCCATCCCCATTAGTATCAATACAAATGCAGCCACACCTTCTTGAGGGCTTATCCAA
 
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JMFS128E02+           CTCATTATTTACCACAGTTTGGAGGAGCACAAGCAACACACAGATTAATAGTGGGAATGA
JMFS136C09+           CTCATTATTTACCACAGTTTGGAGGAGCACAAGCAACACACAGATTAATAGTGGGAATGA
JMFS004F05+           CTCATTATTTACCACAGTTTGGAGGAGCACAAGCAACACACAGATTAATAGTGGGAATGA
JMFS011C04+           CTCATTATTTACCACAGTTTGGAGGAGCACAAGCAACACACAGATTAATAGTGGGAATGA
                      ____________________________________________________________
consensus             CTCATTATTTACCACAGTTTGGAGGAGCACAAGCAACACACAGATTAATAGTGGGAATGA
 
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JMFS128E02+           AATGAGCCATAGATTTGTCCTCACATTTCGTTTCTGAAATGTCAAATTCTTTCTGAGCAG
JMFS136C09+           AATGAGCCATAGATTTGTCCTCACATTTCGTTTCTGAAATGTCAAATTCTTTCTGAGCAG
JMFS004F05+           AATGAGCCATAGATTTGTCCTCACATTTCGTTTCTGAAATGTCAAATTCTTTCTGAGCAG
JMFS011C04+           AATGAGCCATAGATTTGTCCTCACATTTCGTTTCTGAAATGTCAAATTCTTTCTGAGCAG
                      ____________________________________________________________
consensus             AATGAGCCATAGATTTGTCCTCACATTTCGTTTCTGAAATGTCAAATTCTTTCTGAGCAG
 
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JMFS128E02+           AGCATTGGCTTGAGTCCAAAAGCTCGCCGGCCCTTCCGCCATTGATAATCACTCTCTCCA
JMFS136C09+           AGCATTGGCTTGAGTCCAAAAGCTCGCCGGCCCTTCCGCCATTGATAATCACTCTCTCCA
JMFS004F05+           AGCATTGGCTTGAGTCCAAAAGCTCGCCGGCCCTTCCGCCATTGATAATCACTCTCTCCA
JMFS011C04+           AGCATTGGCTTGAGTCCAAAAGCTCGCCGGCCCTTCCGCCATTGATAATCACTCTCTCCA
                      ____________________________________________________________
consensus             AGCATTGGCTTGAGTCCAAAAGCTCGCCGGCCCTTCCGCCATTGATAATCACTCTCTCCA
 
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JMFS128E02+           CTCTCTCTCTCTTTCTATCTCAAATGAAAGAGGAAACCAGTAGTAGTGTTTGAGTTAGTA
JMFS136C09+           CTCTCTCTCTCTTTCTATCTCAAATGAAAGAGGAAACCAGTAGTAGTGTTTGAGTTAGTA
JMFS004F05+           CTCTCTCTCTCTTTCTATCTCAAATGAAAGAGGAAACCAGTAGTAGTGTTTGAGTTAGTA
JMFS011C04+           CTCTCTCTCTCTTTCTATCTCAAATGAAAGAGGAAACCAGTAGTAGTGTTTGAGTTAGTA
                      ____________________________________________________________
consensus             CTCTCTCTCTCTTTCTATCTCAAATGAAAGAGGAAACCAGTAGTAGTGTTTGAGTTAGTA
 
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JMFS128E02+           TTGAAAGCGTTAAGAAGAAGAAGAAGAAGAGCGCCGAGATGA                  
JMFS136C09+           TTGAAAGCGTTAAGAAGAAGAAGAAGAAGAGCGCCGAGATGA                  
JMFS004F05+           TTGAAAGCGTTAAGAAGAAGAAGAAGAAGAGCGCCGAGATGA                  
JMFS011C04+           TTGAAAGCGTTAAGAAGAAGAAGAAGAAGAGCGCCGAGATGATCGATTTCACCCTCATTT
                      ____________________________________________________________
consensus             TTGAAAGCGTTAAGAAGAAGAAGAAGAAGAGCGCCGAGATGATCGATTTCACCCTCATTT
 
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JMFS011C04+           TCAAATACCGTTTCTTCTATATATATATATATATATAGCTTCTCTGCGCATAGTAGTTGA
                      ____________________________________________________________
consensus             TCAAATACCGTTTCTTCTATATATATATATATATATAGCTTCTCTGCGCATAGTAGTTGA