| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004K22 | Sequence | 572 | 007573 (10) | ref|XP_006355338.1| | 1e-83 | PREDICTED: calmodulin-binding transcription activator 3-like [Solanum tuberosum | 718 | 002020 (7) | gb|AAG39222.1|AF253511_1 | 5e-62 | anther ethylene-upregulated protein ER1 [Nicotiana tabacum] |
| JMFS007H05 | Sequence | 622 | 007573 (10) | ref|NP_001266168.1| | 3e-33 | ER66 protein [Solanum lycopersicum] gb|ADK47999.1| calmodulin-binding protein [S | |||||
| JMFS019G07 | Sequence | 579 | 007573 (10) | ref|XP_006355338.1| | 6e-66 | PREDICTED: calmodulin-binding transcription activator 3-like [Solanum tuberosum | |||||
| JMFS034H07 | Sequence | 556 | 007573 (10) | ref|NP_001266168.1| | 3e-37 | ER66 protein [Solanum lycopersicum] gb|ADK47999.1| calmodulin-binding protein [S | |||||
| JMFS097A02 | Sequence | 621 | 007573 (10) | ref|XP_006355338.1| | 1e-87 | PREDICTED: calmodulin-binding transcription activator 3-like [Solanum tuberosum | |||||
| JMFS109F02 | Sequence | 629 | 007573 (10) | ref|XP_006355338.1| | 2e-83 | PREDICTED: calmodulin-binding transcription activator 3-like [Solanum tuberosum | |||||
| JMFS117B09 | Sequence | 581 | 007573 (10) | ref|XP_006355338.1| | 8e-85 | PREDICTED: calmodulin-binding transcription activator 3-like [Solanum tuberosum | |||||
| JMSF008A23 | Sequence | 272 | 007573 (10) | ref|XP_009763882.1| | 6e-16 | PREDICTED: calmodulin-binding transcription activator 3-like isoform X1 [Nicoti | 738 | 002766 (2) | ref|XP_010645223.1| | 4e-71 | PREDICTED: calmodulin-binding transcription activator 3 [Vitis vinifera] |
| JMSF025G02 | Sequence | 657 | 007573 (10) | ref|XP_009763883.1| | 3e-104 | PREDICTED: calmodulin-binding transcription activator 3-like isoform X2 [Nicoti | 677 | 002766 (2) | ref|XP_010645223.1| | 1e-45 | PREDICTED: calmodulin-binding transcription activator 3 [Vitis vinifera] |
| JMSF040A15 | Sequence | 578 | 007573 (10) | ref|XP_006355338.1| | 5e-39 | PREDICTED: calmodulin-binding transcription activator 3-like [Solanum tuberosum | 819 | 002020 (7) | gb|AAG39222.1|AF253511_1 | 4e-81 | anther ethylene-upregulated protein ER1 [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
JMSF025G02+ TTCTGCATCATAGTNGACTGAACTTCAAGAAAAGAGTGGGCTACAGGATTCTTTT
____________________________________________________________
consensus TTCTGCATCATAGTNGACTGAACTTCAAGAAAAGAGTGGGCTACAGGATTCTTTT
. : . : . : . : . : . :
JMSF025G02+ GCTGAATGTATACTGCTGATTCAGCATCTTCATATTCTGAGGCCACGGCACTGTTCAGGC
____________________________________________________________
consensus GCTGAATGTATACTGCTGATTCAGCATCTTCATATTCTGAGGCCACGGCACTGTTCAGGC
. : . : . : . : . : . :
JMSF025G02+ TAGTTGTATCTTCACTTTCCTGGTAACCAGGAATTGCTATTTGAGATTCTTTGACATGGT
JMFS117B09+ C
JMFF004K22+ C
JMFS109F02+ C
____________________________________________________________
consensus TAGTTGTATCTTCACTTTCCTGGTAACCAGGAATTGCTATTTGAGATTCTTTGACATGGC
. : . : . : . : . : . :
JMSF025G02+ TAAAATTTACCCTGTTACCCTTTACTTCCCGGTAATGAACCAGAACAATGTGTGACATCT
JMFS117B09+ TAGAATTCATCCTGTTACCCTTTACTTCCCGGTAGTGGACGAGAACAATGTTCGACTGTG
JMFS097A02+ CCTGTTACCCTTTACTTCCCGGTAGTGGACGAGAACAATGTTCGACTGTG
JMFF004K22+ TAGAATTCATCCTGTTACCCTTTACTTCCCGGTAGTGGACGAGAACAATGTTCGACTGTG
JMFS109F02+ TAGAATTCATCCTGTTACCCTTTACTTCCCGGTAGTGGACGAGAACAATGTTCGACTGTG
____________________________________________________________
consensus TAGAATTCATCCTGTTACCCTTTACTTCCCGGTAGTGGACGAGAACAATGTTCGACTGTG
. : . : . : . : . : . :
JMSF025G02+ CCTCTTCAAGCATCCAGTAGCTACGCCTTTGAAAATTTTCATTCTCTTCTCCATGAGCAT
JMFS117B09+ ACTCTTCGAGCAACCAGTAGCTGCGCCGCTGGAAGTTTTCGTTCTCTTCTCCGTGAGCAT
JMFS097A02+ ACTCTTCGAGCAACCAGTAGCTGCGCCGCTGGAAGTTTTCGTTCTCTTCTCCGTGAGCAT
JMFF004K22+ ACTCTTCGAGCAACCAGTAGCTGCGCCGCTGGAAGTTTTCGTTCTCTTCTCCGTGAGCAT
JMFS109F02+ ACTCTTCGAGCAACCAGTAGCTGCGCCGCTGGAAGTTTTCGTTCTCTTCTCCGTGAGCAT
JMFS019G07+ CCGCTGGAAGTTTTCGTTCTCTTCTCCGTGAGCAT
____________________________________________________________
consensus ACTCTTCGAGCAACCAGTAGCTGCGCCGCTGGAAGTTTTCGTTCTCTTCTCCGTGAGCAT
. : . : . : . : . : . :
JMSF025G02+ AATAGCAATGCAGCACATCAATGCTTCCAGCCTTGAGCCTTTCATGAGCCTCCTTAACAG
JMFS117B09+ AATAGCAGTGCAACACATCAATGCTTCCAGACTTGAGCTTTTCATGAGCCTCCTTGACAG
JMFS097A02+ AATAGCAGTGCAACACATCAATGCTTCCAGACTTGAGCTTTTCATGAGCCTCCTTGACAG
JMFF004K22+ AATAGCAGTGCAACACATCAATGCTTCCAGACTTGAGCTTTTCATGAGCCTCCTTGACAG
JMFS109F02+ AATAGCAGTGCAACACATCAATGCTTCCAGACTTGAGCTTTTCATGAGCCTCCTTGACAG
JMFS019G07+ AATAGCAGTGCAACACATCAATGCTTCCAGACTTGAGCTTTTCATGAGCNTCCTTGACAG
____________________________________________________________
consensus AATAGCAGTGCAACACATCAATGCTTCCAGACTTGAGCTTTTCATGAGCCTCCTTGACAG
. : . : . : . : . : . :
JMSF025G02+ TCTTCCCATCCTTTTTCTTCCGCCACTTGTGCCCATCTTTTCGAAAATAACGTAACACCT
JMFS117B09+ TCTTCCCGTCCTTTTTCTTCCTCCAGTTATGCCCATCTTTCCGAAAATATCGTAATACCT
JMFS097A02+ TCTTCCCGTCCTTTTTCTTCCTCCAGTTATGCCCATCTTTCCGAAAATATCGTAATACCT
JMFF004K22+ TCTTCCCGTCCTTTTTCTTCCTCCAGTTATGCCCATCTTTCCGAAAATATCGTAATACCT
JMFS109F02+ TCTTCCCGTCCTTTTTCTTCCTCCAGTTATGCCCATCTTTCCGAAAATATCGTAATACCT
JMFS019G07+ TCTTCCCGTCCTTTTTCTTCCTCCAGTTATGCCCATCTTTCCGAAAATATCGTAATACCT
JMFS034H07+ TTCCTCCAGTGATGCACATCTGTCCGAAAATATCGTAATACCT
JMSF040A15+ TCCTCCAGTTATGCCCATCTTTCCGAAAATATCGTAATACCT
JMFS007H05+ TTCCGAAAATATCGTAATACCT
____________________________________________________________
consensus TCTTCCCGTCCTTTTTCTTCCTCCAGTTATGCCCATCTTTCCGAAAATATCGTAATACCT
. : . : . : . : . : . :
JMSF025G02+ TCCGGTCAAAAAGAAACAGTGAACCATTCGGTGGCGTGTTTGGAGGCTCAGGAGCAATCT
JMFS117B09+ TACGGTCAAAAAGAAACAGTGAACCACTTGGAGGCCTAGTTGGAGGCTCGGGAGCAATCC
JMFS097A02+ TACGGTCAAAAAGAAACAGTGAACCACTTGGAGGCCTAGTTGGAGGCTCGGGAGCAATCC
JMFF004K22+ TACGGTCAAAAAGAAACAGTGAACCACTTGGAGGCCTAGTTGGAGGCTCGGGAGCAATCC
JMFS109F02+ TACGGTCAAAAAGAAACAGTGAACCACTTGGAGGCCTAGTTGGAGGCTCGGGAGCAATCC
JMFS019G07+ TACGGTCAAAAAGAAACAGTGAACCACTTGGAGGCCTAGTTGGAGGCTCGGGAGCAATCC
JMFS034H07+ TACGGTCAAAAAGAAACAGTGAACCACTTGGAGGCCTAGTTGGAGGCTCGGGAGCAATCC
JMSF040A15+ TACGGTCAAAAAGAAACAGTGAACCACTTGGAGGCCTAGTTGGAGGCTCGGGAGCAATCC
JMFS007H05+ TACGGTCAAAAAGAAACAGTGAACCACTTGGAGGCCTAGTTGNAGGCTCGGGAGCAATCC
____________________________________________________________
consensus TACGGTCAAAAAGAAACAGTGAACCACTTGGAGGCCTAGTTGGAGGCTCGGGAGCAATCC
. : . : . : . : . : . :
JMSF025G02+ GAAACTTCTGGTAATTTTTAAGTATTTCACAAATTTCAGCTGGGCGAAGCCATCTGTGTT
JMSF008A23+ AAGTATTTCACAAATTTCAGCTGGGCGAAGCCATCTGTGTT
JMFS117B09+ GAAATTTCTGGTAATTCGAAAGTATTTCACAGATTTCAGCTGGGCGGAGCCAACGATGTT
JMFS097A02+ GAAATTTCTGGTAATTCGAAAGTATTTCACAGATTTCAGCTGGGCGGAGCCAACGATGTT
JMFF004K22+ GAAATTTCTGGTAATTCGAAAGTATTTCACAGATTTCAGCTGGGCGGAGCCAACGATGTT
JMFS109F02+ GAAATTTCTGGTAATTCGAAAGTATTTCACAGATTTCAGCTGGGCGGAGCCAACGATGTT
JMFS019G07+ GAAATTTCTGGTAATTCGAAAGTATTTCACAGATTTCAGCTGGGCGGAGCCAACGATGTT
JMFS034H07+ GAAATTTCTGGTAATTCGAAAGTATTTCACAGATTTCAGCTGGGCGGAGCCAACGATGTT
JMSF040A15+ GAAATTTCTGGTAATTCGAAAGTATTTCACAGATTTCAGCTGGGCGGAGCCAACGATGTT
JMFS007H05+ GAAATTTCTGGTAATTCGAAAGTATTTCACAGATTTCAGCTGGGCGGAGCCAACGATGTT
____________________________________________________________
consensus GAAATTTCTGGTAATTCGAAAGTATTTCACAGATTTCAGCTGGGCGGAGCCAACGATGTT
. : . : . : . : . : . :
JMSF025G02+ GTGCTTCTAAGAGTATCTGATCAATATCTAATTGAGCATTAAG
JMSF008A23+ GTGCTTCTAAGAGTATCTGATCAATATCTAATTGAGCATTAAG
JMFS117B09+ GTGCTTCTAACAGTATCTGCTCAATATCTAATTGAGCATTAAGACCGTGCCGCCTGCTCT
JMFS097A02+ GTGCTTCTAACAGTATCTGCTCAATATCTAATTGAGCATTAAGACCGTGCCGCCTGCTCT
JMFF004K22+ GTGCTTCTAACAGTATCTGCTCAATATCTAATTGAGCATTAAGACCGTGCCGCCTGCTCT
JMFS109F02+ GTGCTTCTAACAGTATCTGCTCAATATCTAATTGAGCATTAAGACCGTGCCGCCTGCTCT
JMFS019G07+ GTGCTTCTAACAGTATCTGCTCAATATCTAATTGAGCATTAAGACCGTGCCGCCTGCTCT
JMFS034H07+ GTGCTTCTAACAGTATCTGCTCAATATCTAATTGAGCATTAAGACCGTGCCGCCTGCTCT
JMSF040A15+ GTGCTTCTAACAGTATCTGCTCAATATCTAATTGAGCATTAAGACCGTGCCGCCTGCTCT
JMFS007H05+ GTGCTTCTAACAGTATCTGCTCAATATCTAATTGAGCATTAAGACCGTGCCGCCTGCTCT
____________________________________________________________
consensus GTGCTTCTAACAGTATCTGCTCAATATCTAATTGAGCATTAAGACCGTGCCGCCTGCTCT
. : . : . : . : . : . :
JMFS117B09+ CCGCGGCCATAAAAACAGCTCAGAAACACTACAGGTAAATTTTCGCCGAGATCTCAAGAC
JMFS097A02+ CCGCGGCCATAAAAACAGCTCAGAAACACTACAGGTAAATTTTCGCCGAGATCTCAAGAC
JMFF004K22+ CCGCGGCCATAAAAACAGCTCAGAAACACTACAGGTAAATTTTCGCCGAGATCTCAAGAC
JMFS109F02+ CCGCGGCCATAAAAACAGCTCAGAAACACTACAGGTAAATTTTCGCCGAGATCTCAAGAC
JMFS019G07+ CCGCGGCCATAAAAACAGCTCAGAAACACTACAGGTAAATTTTCGCCGAGATCTCAAGAC
JMFS034H07+ CCGCGGCCATAAAAACAGCTCAGAAACACTACAGGTAAATTTTCGCCGAGATCTCAAGAC
JMSF040A15+ CCGCGGCCATAAAAACAGCTCAGAAAC---ACAGGTAAATTTTCGCCGAGATCTCAAGAC
JMFS007H05+ CCGCGGCCATAAAAACAGCTCAGAAACACTACAGGTAAATTTTCGCCGAGATCTCAAGAC
____________________________________________________________
consensus CCGCGGCCATAAAAACAGCTCAGAAACACTACAGGTAAATTTTCGCCGAGATCTCAAGAC
. : . : . : . : . : . :
JMFS117B09+ TCCAAGCTTTGTGAATTCCAGAAAACATCAGATTAAATCCACCGTACAGAACTTCTGGGC
JMFS097A02+ TCCAAGCTTTGTGAATTCCAGAAAACATCAGATTAAATCCACCGTACAGAACTTCTGGGC
JMFF004K22+ TCCAAGCTTTATGAATTCCAGAAAACATCAGATTAAATCCACCGTACAGAACTTCTGGGC
JMFS109F02+ TCCAAGCTTTGTGAATTCCAGAAAACATCAGATTAAATCCACCGTACAGAACTTCTGGGC
JMFS019G07+ TCCAAGCTTTGTGAATTCCAGAAAACATCAGATTAAATCCACCGTACAGAACTTCTGGGC
JMFS034H07+ TCCAAGCTTTGTGAATTCCAGAAAACATCAGATTAAATCCACCGTACAGAACTTCTGGGC
JMSF040A15+ TCCAAGCTTTGTGAATTCCAGAAAACATCAGATTAAATCCACCGTACAGAACTTCTGGGC
JMFS007H05+ TCCAAGCTTTGTGAATTCCAGAAAACATCAGATTAAATCCACCGTACAGAACTTCTGGGC
____________________________________________________________
consensus TCCAAGCTTTGTGAATTCCAGAAAACATCAGATTAAATCCACCGTACAGAACTTCTGGGC
. : . : . : . : . : . :
JMFS117B09+ AAGCT
JMFS097A02+ AAGCTTGATTTCGAGTACAGATCAATAAAAAAATGAGAAATTGATCAGGGAAATCT
JMFF004K22+ AAGCT
JMFS109F02+ AAGCTTGATTTCGAGTACAGATCAATAAAAAAATGAGAAATTGATCAGGGAAATCTAAAA
JMFS019G07+ AAGCTTGATTTCGAGTACAGATCAATAAAAAAATGAGAAATTGATCAGGGAAATCTAAAA
JMFS034H07+ AAGCTTGATTTCGAGTACAGATCAATAAAAAAATGAGAAATTGATCAGGGAAATCTAAAA
JMSF040A15+ AAGCTTGATTTCGAGTACAGATCAATAAAAAAATGAGAAATTGATCAGGGAAATCTAAAA
JMFS007H05+ AAGCTTGATTTCGAGTACAGATCAATAAAAAAATGAGAAATTGATCAGGGAAATCTAAAA
____________________________________________________________
consensus AAGCTTGATTTCGAGTACAGATCAATAAAAAAATGAGAAATTGATCAGGGAAATCTAAAA
. : . : . : . : . : . :
JMFS109F02+ ACAGTGTGCTTGGTAAATATAAAAT
JMFS019G07+ ACAGTGTGCTTGGTAAATATAAAATAAAAAAGAATGAAAACGCGGT
JMFS034H07+ ACAGTGTGCTTGGTAAATATAAAATAAAAAAGAATGAAAACGCGGTTATCAGAGAGAGCA
JMSF040A15+ ACAGTGTGCTTGGTAAATATAAAATAAAAAAGAATGAAAACGCGGTTATCAGAGAGAGCA
JMFS007H05+ ACAGTGTGCTTGGTAAATATAAAATAAAAAAGAATGAAAACGCGGTTATCAGAGAGAGCA
____________________________________________________________
consensus ACAGTGTGCTTGGTAAATATAAAATAAAAAAGAATGAAAACGCGGTTATCAGAGAGAGCA
. : . : . : . : . : . :
JMFS034H07+ AGAGAGAGAGAGAGAGGAGGATAGAGTGGCCGTCGAATTGGAATCCAGTTAAGTTCAGAC
JMSF040A15+ AGAGAGAGAGAGAGAGGAGGATAGAGTGGCCGTCGAATTGGAATCCAGTTAAGTTCAGAC
JMFS007H05+ AGAGAGAGAGAGAGAGGAGGATAGAGTGGCCGTCGAATTGGAATCCAGTTAAGTTCAGAC
____________________________________________________________
consensus AGAGAGAGAGAGAGAGGAGGATAGAGTGGCCGTCGAATTGGAATCCAGTTAAGTTCAGAC
. : . : . : . : . : . :
JMFS034H07+ AGGGACTTGGATGAGAGATGATGCAAGACCTGA
JMSF040A15+ AGGGACTTGGATGAGAGATGATGCAAGACCTGAGTCAAAGTTGACGCGAGCGATTTCT
JMFS007H05+ AGGGACTTGGATGAGAGATGATGCAAGACCTGAGTCAAAGTTGACGCGAGCGATTTCTAC
____________________________________________________________
consensus AGGGACTTGGATGAGAGATGATGCAAGACCTGAGTCAAAGTTGACGCGAGCGATTTCTAC
. : . : . : . : . : . :
JMFS007H05+ GCCCTACGCCGTATTGCACACACCTATATATGAAAATAAAAAGATACATTATACATACAA
____________________________________________________________
consensus GCCCTACGCCGTATTGCACACACCTATATATGAAAATAAAAAGATACATTATACATACAA