Contig 007571:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS007F08Sequence622007571 (3)ref|XP_011088827.1|7e-73PREDICTED: AP-2 complex subunit alpha-1-like [Sesamum indicum]
JMFS046E09Sequence636007571 (3)ref|XP_011088827.1|4e-85PREDICTED: AP-2 complex subunit alpha-1-like [Sesamum indicum]
JMSF018C09Sequence216007571 (3)716016079ref|XP_009769671.1|2e-30PREDICTED: AP-2 complex subunit alpha-1-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS046E09+ ATGTTTCCAACC
                      ____________________________________________________________
consensus ATGTTTCCAACC
 
. : . : . : . : . : . :
JMFS046E09+ AATGTTAGTGCTAGACACTGAAATGTCTCATTGCGTCCAATTATGTCATTCCGCACAGTA
JMFS007F08+ AATTATGTCATTCCGCACAGTA
                      ____________________________________________________________
consensus AATGTTAGTGCTAGACACTGAAATGTCTCATTGCGTCCAATTATGTCATTCCGCACAGTA
 
. : . : . : . : . : . :
JMFS046E09+ TTAATTGCTAATCGCAAGAAGTCATGATTCTCATTGAGCAAACATGATGTGACTATGTAA
JMFS007F08+ TTAATTGCTAATCGCAAGAAGTCATGATTCTCATTGAGCAAACATGATGTGACTATGTAA
                      ____________________________________________________________
consensus TTAATTGCTAATCGCAAGAAGTCATGATTCTCATTGAGCAAACATGATGTGACTATGTAA
 
. : . : . : . : . : . :
JMFS046E09+ CCAACCTGCTTCTCAGGATACTTCGGAGCAGATATTAGAGAAACAGCTTCCATATGACCA
JMFS007F08+ CCAACCTGCTTCTCAGGATACTTCGGAGCAGATATTAGAGAAACAGCTTCCATATGACCA
                      ____________________________________________________________
consensus CCAACCTGCTTCTCAGGATACTTCGGAGCAGATATTAGAGAAACAGCTTCCATATGACCA
 
. : . : . : . : . : . :
JMFS046E09+ AAATCCACATCATAACCAAGCATAAATATGTAAAGCATTTTCCAAACATATTTCTTTTTC
JMFS007F08+ AAATCCACATCATAACCAAGCATAAATATGTAAAGCATTTTCCAAACATATTTCTTTTTC
                      ____________________________________________________________
consensus AAATCCACATCATAACCAAGCATAAATATGTAAAGCATTTTCCAAACATATTTCTTTTTC
 
. : . : . : . : . : . :
JMFS046E09+ TCATAAGGTGTCAAACCCTTTTCGTTCTTGAATCGAGTACGGATATTCCCGAGCTCCTTG
JMFS007F08+ TCATAAGGTGTCAAACCCTTTTCGTTCTTGAATCGAGTACGGATATTCCCGAGCTCCTTG
                      ____________________________________________________________
consensus TCATAAGGTGTCAAACCCTTTTCGTTCTTGAATCGAGTACGGATATTCCCGAGCTCCTTG
 
. : . : . : . : . : . :
JMFS046E09+ TCGACGCGGAGACGCTCCTGCTCTTTGTTCTGGCAATTGCGAATGTCGCTTATGAACACC
JMFS007F08+ TCGACGCGGAGACGCTCCTGCTCTTTGTTCTGGCAATTGCGAATGTCGCTTATGAACACC
                      ____________________________________________________________
consensus TCGACGCGGAGACGCTCCTGCTCTTTGTTCTGGCAATTGCGAATGTCGCTTATGAACACC
 
. : . : . : . : . : . :
JMFS046E09+ GACAGACCCCTCATGCCAGACAACGCCATCTCCCCCGGACGCTCAGATCCGATCCAGCTC
JMFS007F08+ GACAGACCCCTCATGCCAGACAACGCCATCTCCCCCGGACGCTCAGATCCGATCCAGCTC
                      ____________________________________________________________
consensus GACAGACCCCTCATGCCAGACAACGCCATCTCCCCCGGACGCTCAGATCCGATCCAGCTC
 
. : . : . : . : . : . :
JMFS046E09+ AGAGGCGGCTCCCAATTTCTTCTCGATCCAACGTTTCCACAAAGGTCTTCCCTTCAAAGA
JMSF018C09+ TCTTCTCGATCCAACGTTTCCACAAAGGTCTTCCCTTCAAAGA
JMFS007F08+ AGAGGCGGCTCCCAATTTCTTCTCGATCCAACGTTTCCACAAAGGTCTTCCCTTCAAAGA
                      ____________________________________________________________
consensus AGAGGCGGCTCCCAATTTCTTCTCGATCCAACGTTTCCACAAAGGTCTTCCCTTCAAAGA
 
. : . : . : . : . : . :
JMFS046E09+ TCGAGCCTCCAAACTCACATAAAAATGCGCTTCTGTCAATTCGTCTCCCAGTGTAAAAAC
JMSF018C09+ TCGAGCCTCCAAACTCACATAAAAATGCGCTTCTGTCAATTCGTCTCCCAGTGTAAAAAC
JMFS007F08+ TCGAGCCTCCAAACTCACATAAAAATGCGCTTCTGTCAATTCGTCTCCCAGTGTAAAAAC
                      ____________________________________________________________
consensus TCGAGCCTCCAAACTCACATAAAAATGCGCTTCTGTCAATTCGTCTCCCAGTGTAAAAAC
 
. : . : . : . : . : . :
JMFS046E09+ GCGCGTATGTATCTTCTGTATGGATAGATAGAGAGAGAAAAGAAGAGGGAATAGAGAAAG
JMSF018C09+ GCGCGTATGTATCTTCTGTATGGATAGATAGAGAGAGAAAAGAAGAGGGAATAGAGAAAG
JMFS007F08+ GCGCGTATGTATCTTCTGTATGGATAGATAGAGAGAGAAAAGAAGAGGGAATAGAGAAAG
                      ____________________________________________________________
consensus GCGCGTATGTATCTTCTGTATGGATAGATAGAGAGAGAAAAGAAGAGGGAATAGAGAAAG
 
. : . : . : . : . : . :
JMFS046E09+ TGTATTGTGATCTAGAGAGAGAAA
JMSF018C09+ TGTATTGTGATCTAGAGAGAGAAAGGTGGACTGAGAAAAATTGGAGCAGCC
JMFS007F08+ TGTATTGTGATCTAGAGAGAGAAAGGTGGACTGAGAAAAATTGGAGCAGCCGTCGGGCCA
                      ____________________________________________________________
consensus TGTATTGTGATCTAGAGAGAGAAAGGTGGACTGAGAAAAATTGGAGCAGCCGTCGGGCCA