Contig 007569:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS006H11Sequence589007569 (2)ref|XP_009803658.1|4e-65PREDICTED: TMV resistance protein N-like [Nicotiana sylvestris]
JMFS097F04Sequence618007569 (2)ref|XP_009803658.1|9e-78PREDICTED: TMV resistance protein N-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS097F04+                                                                 CAAATA
                      ____________________________________________________________
consensus                                                                   CAAATA
 
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JMFS097F04+           TCTTCAGGAATCCATAGCCTGCTAAACTTCCATGGCTCTCTAGGGTGATCTTTGCGGACG
                      ____________________________________________________________
consensus             TCTTCAGGAATCCATAGCCTGCTAAACTTCCATGGCTCTCTAGGGTGATCTTTGCGGACG
 
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JMFS097F04+           ATGTACCAACCCATTTCTTGCACTAAATCATGCATCTGAAACTTTTCATCTGATATATAC
                      ____________________________________________________________
consensus             ATGTACCAACCCATTTCTTGCACTAAATCATGCATCTGAAACTTTTCATCTGATATATAC
 
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JMFS097F04+           AACAGCGATTTTTGAATCAGAACCTTCACTCCAATATCAGGTTGGAATCCAAAACTATTC
                      ____________________________________________________________
consensus             AACAGCGATTTTTGAATCAGAACCTTCACTCCAATATCAGGTTGGAATCCAAAACTATTC
 
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JMFS097F04+           AGCTTTCTCCAAGCATCCTGTGTCCTCTTCCCCTTGTAGAAACAAGCAATGTCGAGGAAT
                      ____________________________________________________________
consensus             AGCTTTCTCCAAGCATCCTGTGTCCTCTTCCCCTTGTAGAAACAAGCAATGTCGAGGAAT
 
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JMFS097F04+           ATCTCCTTTTCCAGATCGTGAAGTGCATCGAAGCTGAGTTTAAGTTTCCCTATGATATCG
                      ____________________________________________________________
consensus             ATCTCCTTTTCCAGATCGTGAAGTGCATCGAAGCTGAGTTTAAGTTTCCCTATGATATCG
 
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JMFS097F04+           TTAGGCGGGATCCCTTTCAATCGTTCAAGTTCACTTTCCCATTCGTTTTTCTGTCTTCCA
                      ____________________________________________________________
consensus             TTAGGCGGGATCCCTTTCAATCGTTCAAGTTCACTTTCCCATTCGTTTTTCTGTCTTCCA
 
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JMFS097F04+           TGGAGGAATGATCCCAAAACTTTGATCGCCAGAGGGAGTCCGCCCGCGTAATTCACGACT
                      ____________________________________________________________
consensus             TGGAGGAATGATCCCAAAACTTTGATCGCCAGAGGGAGTCCGCCCGCGTAATTCACGACT
 
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JMFS097F04+           TGGAGAGAAACCTCTTTGAATTCTTCGCTTGGAGAGCCGTCCTTGAAGGCGAATTTGTTG
                      ____________________________________________________________
consensus             TGGAGAGAAACCTCTTTGAATTCTTCGCTTGGAGAGCCGTCCTTGAAGGCGAATTTGTTG
 
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JMFS097F04+           AAGAGCTTCGACGCCATTTCAGATCCTAAGAGATTAACATCGTAGATTGGATGAATTCCG
JMFS006H11+                      CGCCATTTCAGATCCTAAGAGATTAACATCGTAGATTGGATGAATTCCG
                      ____________________________________________________________
consensus             AAGAGCTTCGACGCCATTTCAGATCCTAAGAGATTAACATCGTAGATTGGATGAATTCCG
 
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JMFS097F04+           TGAGCGGAGAGTAATTGACTGTTCCTCGTTGTTATGATGATTCTGCTCCCCTTACCGAAC
JMFS006H11+           TGAGCGGAGAGTAATTGACTGTTCCTCGTTGTTATGATGATTCTGCTCCCCTTACCGAAC
                      ____________________________________________________________
consensus             TGAGCGGAGAGTAATTGACTGTTCCTCGTTGTTATGATGATTCTGCTCCCCTTACCGAAC
 
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JMFS097F04+           CGGTTGTAATCT                                                
JMFS006H11+           CGGTTGTAATCTGGAGCTAATTTCTCCAGCTGTTCATCTTTATCTACATCGTCGAGAACG
                      ____________________________________________________________
consensus             CGGTTGTAATCTGGAGCTAATTTCTCCAGCTGTTCATCTTTATCTACATCGTCGAGAACG
 
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JMFS006H11+           ATCAGGACTCTCTTGTGGCTCAGCCTCGCCATGAGCAAATCGGTGCTGGTGTGGAGCTTC
                      ____________________________________________________________
consensus             ATCAGGACTCTCTTGTGGCTCAGCCTCGCCATGAGCAAATCGGTGCTGGTGTGGAGCTTC
 
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JMFS006H11+           TCCCTCCCTTCTTTCAGAGTCTCCGAAAGCAATTTCTCCTGCAGGGAATCTAGCCCTGTT
                      ____________________________________________________________
consensus             TCCCTCCCTTCTTTCAGAGTCTCCGAAAGCAATTTCTCCTGCAGGGAATCTAGCCCTGTT
 
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JMFS006H11+           TTCGCCGACATTTCTCGGACGCCGTCGAGATAGCAGCTGCCTTCGAAGCTTTGACAGATT
                      ____________________________________________________________
consensus             TTCGCCGACATTTCTCGGACGCCGTCGAGATAGCAGCTGCCTTCGAAGCTTTGACAGATT
 
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JMFS006H11+           TGGTTAAACACAGCTCTGGCAATGGTGGATTTTCCAATCCCGCCCATGCCCCAAATTCCG
                      ____________________________________________________________
consensus             TGGTTAAACACAGCTCTGGCAATGGTGGATTTTCCAATCCCGCCCATGCCCCAAATTCCG
 
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JMFS006H11+           ATTATGCGCACATCGTCCTCGGGCCCTGTGGTTAACAGCGACATCACATTCTCCACCTGG
                      ____________________________________________________________
consensus             ATTATGCGCACATCGTCCTCGGGCCCTGTGGTTAACAGCGACATCACATTCTCCACCTGG
 
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JMFS006H11+           GGCTCTATTCCAATCGTATCCGCACTTACCGTGAACCTACTTCCCAATTTGTTCAAGATT
                      ____________________________________________________________
consensus             GGCTCTATTCCAATCGTATCCGCACTTACCGTGAACCTACTTCCCAATTTGTTCAAGATT
 
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JMFS006H11+           TTGACGGCAATATCTCTAATGCATCTTGATTCATGCCCATCCTCCATATTCTTGACGTCA
                      ____________________________________________________________
consensus             TTGACGGCAATATCTCTAATGCATCTTGATTCATGCCCATCCTCCATATTCTTGACGTCA