Contig 007566:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS003H12Sequence576007566 (6)
JMFS017B08Sequence640007566 (6)ref|XP_007033848.1|2e-07Plant regulator RWP-RK family protein, putative isoform 1 [Theobroma cacao] gb|
JMFS090H08Sequence619007566 (6)
JMFS127A11Sequence616007566 (6)
JMSF007O24Sequence146007566 (6)264022450ref|XP_004250776.1|2e-06PREDICTED: protein NLP9 [Solanum lycopersicum] ref|XP_010313114.1| PREDICTED: pr
JMSF013K05Sequence510007566 (6)

Alignment

This contig is upended


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JMFS017B08+                       ATTGGAGTAAGGGGTGAAAATGCAAAGGAGGCAAGCATTTGATCCATG
                      ____________________________________________________________
consensus                         ATTGGAGTAAGGGGTGAAAATGCAAAGGAGGCAAGCATTTGATCCATG
 
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JMFS017B08+           GTAGCAGGACTATTGCACCATCCAGCATATGCATCAAAATTCATGATGTCCATAGCACTG
JMFS090H08+                             CATCCAGCATATGCATCAAAATTCATGATGTCCATAGCACTG
                      ____________________________________________________________
consensus             GTAGCAGGACTATTGCACCATCCAGCATATGCATCAAAATTCATGATGTCCATAGCACTG
 
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JMFS017B08+           ACATTAAATGAATCATCAGGAGTTGAACACTTTGTACCATCCAATGAGACTTCATCCCCT
JMFS090H08+           ACATTAAATGAATCATCAGGAGTTGAACACTTTGTACCATCCAATGAGACTTCATCCCCT
                      ____________________________________________________________
consensus             ACATTAAATGAATCATCAGGAGTTGAACACTTTGTACCATCCAATGAGACTTCATCCCCT
 
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JMFS017B08+           TCCATCTCAAAGTAACCTATACCCTTCTCCTCTTCCAGCTCCACTTATAAAATTTTCAAA
JMFS090H08+           TCCATCTCAAAGTAACCTATACCCTTCTCCTCTTCCAGCTCCACTTATAAAATTTTCAAA
                      ____________________________________________________________
consensus             TCCATCTCAAAGTAACCTATACCCTTCTCCTCTTCCAGCTCCACTTATAAAATTTTCAAA
 
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JMFS017B08+           GGAAACCAAATAGTGAAATGCTAGAGAACCCTCAGCAGTGTCAAATTGAACTTTCTCTCC
JMFS090H08+           GGAAACCAAATAGTGAAATGCTAGAGAACCCTCAGCAGTGTCAAATTGAACTTTCTCTCC
JMFS127A11+                                                  GTCAAATTGAACTTTCTCTCC
                      ____________________________________________________________
consensus             GGAAACCAAATAGTGAAATGCTAGAGAACCCTCAGCAGTGTCAAATTGAACTTTCTCTCC
 
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JMFS017B08+           CTAAAATCCCCCCACAGTAGCAGTCCAAGAAAACAATATCTTAACATCAAGTTCATCTAC
JMFS090H08+           CTAAAATCCCCCCACAGTAGCAGTCCAAGAAAACAATATCTTAACATCAAGTTCATCTAC
JMFS127A11+           CTAAAATCCCCCCACAGTAGCAGTCCAAGAAAACAATATCTTAACATCAAGTTCATCTAC
                      ____________________________________________________________
consensus             CTAAAATCCCCCCACAGTAGCAGTCCAAGAAAACAATATCTTAACATCAAGTTCATCTAC
 
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JMFS017B08+           ACCCCAGCAACTCACCGTTGTCTCGATTATCTTCCAAATTTGCCAAACTATTGAATCCTA
JMFS090H08+           ACCCCAGCAACTCACCGTTGTCTCGATTATCTTCCAAATTTGCCAAACTATTGAATCCTA
JMFS127A11+           ACCCCAGCAACTCACCGTTGTCTCGATTATCTTCCAAATTTGCCAAACTATTGAATCCTA
                      ____________________________________________________________
consensus             ACCCCAGCAACTCACCGTTGTCTCGATTATCTTCCAAATTTGCCAAACTATTGAATCCTA
 
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JMFS017B08+           GATCTGAAATATTCCACG-----CCGTTAACATGGAAGGAAATTCAAAGAAACCCAAAAC
JMFS090H08+           GATCTGAAATATTCCACGCCTCACCGTTAACATGGAAGGAAATTCAAAGAAACCCAAAAC
JMFS127A11+           GATCTGAAATATTCCACGCCTCACCGTTAACATGGAAGGAAATTCAAAGAAACCCAAAAC
JMSF013K05+                                  CCGTTAACATGGAAGGAAATTCAAAGAAACCCAAAAC
JMFS003H12+                                   CGTTAACATGGAAGGAAATTCAAAGAAACCCAAAAC
                      ____________________________________________________________
consensus             GATCTGAAATATTCCACGCCTCACCGTTAACATGGAAGGAAATTCAAAGAAACCCAAAAC
 
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JMFS017B08+           GCAGTCAAATTCTGAACTGCGAAGAAAGGTCAAGAGCTATCAATCAAACCCAAACTTCCA
JMFS090H08+           GCAGTCAAATTCTGAACTGCGAAGAAAGGTCAAGAGCTATCAATCAAACCCAAACTTCCA
JMFS127A11+           GCAGTCAAATTCTGAACTGCGAAGAAAGGTCAAGAGCTATCAATCAAACCCAAACTTCCA
JMSF013K05+           GCAGTCAAATTCTGAACTGCGAAGAAAGGTCAAGAGCTATCAATCAAACCCAAACTTCCA
JMFS003H12+           GCAGTCAAATTCTGAACTGCGAAGAAAGGTCAAGAGCTATCAATCAAACCCAAACTTCCA
                      ____________________________________________________________
consensus             GCAGTCAAATTCTGAACTGCGAAGAAAGGTCAAGAGCTATCAATCAAACCCAAACTTCCA
 
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JMFS017B08+           AGAACTAATCAAAACCAACAAATCAAGCCAAGACCCACTTCACAAAACTAACCAGAGAAC
JMFS090H08+           AGAACTAATCAAAACCAACAAATCAAGCCAAGACCCACTTCACAAAACTAACCAGAGAAC
JMFS127A11+           AGAACTAATCAAAACCAACAAATCAAGCCAAGACCCACTTCACAAAACTAACCAGAGAAC
JMSF013K05+           AGAACTAATCAAAACCAACAAATCAAGCCAAGACCCACTTCACAAAACTAACCAGAGAAC
JMFS003H12+           AGAACTAATCAAAACCAACAAATCAAGCCAAGACCCACTTCACAAAACTAACCAGAGAAC
                      ____________________________________________________________
consensus             AGAACTAATCAAAACCAACAAATCAAGCCAAGACCCACTTCACAAAACTAACCAGAGAAC
 
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JMFS017B08+           AGAAAGGACGCCCAGATTCGAACACGGAACTCAGGCATAGGGATAATTAGCAGAAAA   
JMFS090H08+           AGAAAGGACGCCCAGATTCGAACACGGAACTCAGGCATAGGGATAATTAGCAGAAAATGA
JMFS127A11+           AGAAAGGACGCCCAGATTCGAACACGGAACTCAGGCATAGGGATAATTAGCAGAAAATGA
JMSF007O24+                                          CAGGCATAGGGATANTTAGCAGAAAATGA
JMSF013K05+           AGAAAGGACGCCCAGATTCGAACACGGAACTCAGGCATAGGGATAATTAGCAGAAAATGA
JMFS003H12+           AGAAAGGACGCCCAGATTCGAACACGGAACTCAGGCATAGGGATAATTAGCAGAAAATGA
                      ____________________________________________________________
consensus             AGAAAGGACGCCCAGATTCGAACACGGAACTCAGGCATAGGGATAATTAGCAGAAAATGA
 
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JMFS090H08+           ATAGGGAACTTATAGAAGACCCTAACCCAAGTCATTG                       
JMFS127A11+           ATAGGGAACTTATAGAAGACCCTAACCCAAGTCATTGGACTTGCTGGGTATTATTTCCAA
JMSF007O24+           ATAGGGAACTTATAGAAGACCCTAACCCAAGTCATTGGACTTGCTGGGTATTATTTCCAA
JMSF013K05+           ATAGGGAACTTATAGAAGACCCTAACCCAAGTCATTGGACTTGCTGGGTATTATTTCCAA
JMFS003H12+           ATAGGGAACTTATAGAAGACCCTAACCCAAGTCATTGGACTTGCTGGGTATTATTTCCAA
                      ____________________________________________________________
consensus             ATAGGGAACTTATAGAAGACCCTAACCCAAGTCATTGGACTTGCTGGGTATTATTTCCAA
 
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JMFS127A11+           GGAAACTGACATATACCTCTTCTGCTTATAAAGGGAGCAGCAATAGATAAGCTAATTGAT
JMSF007O24+           GGAAACTGACATATACCTCTTCTGCTTATAAAGGGAGCAGCAATAGATAAGCTAATT   
JMSF013K05+           GGAAACTGACATATACCTCTTCTGCTTATAAAGGGAGCAGCAATAGATAAGCTAATTGAT
JMFS003H12+           GGAAACTGACATATACCTCTTCTGCTTATAAAGGGAGCAGCAATAGATAAGCTAATTGAT
                      ____________________________________________________________
consensus             GGAAACTGACATATACCTCTTCTGCTTATAAAGGGAGCAGCAATAGATAAGCTAATTGAT
 
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JMFS127A11+           GCAACAACAACAAAAATAAAGTGGGGGAATTGTTAGGGATTCTCTGTTTCAGGAAATTTA
JMSF013K05+           GCAACAACAACAAAAATAAAGTGGGGGAATTGTTAGGGATTCTCTGTTTCAGGAAATTTA
JMFS003H12+           GCAACAACAACAAAAATAAAGTGGGGGAATTGTTAGGGATTCTCTGTTTCAGGAAATTTA
                      ____________________________________________________________
consensus             GCAACAACAACAAAAATAAAGTGGGGGAATTGTTAGGGATTCTCTGTTTCAGGAAATTTA
 
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JMFS127A11+           GGAGTTTGCTTTGCTAAAAATAGAAAGGATGGTGTGCGAATCTAAAAATAGAAAG     
JMSF013K05+           GGAGTTTGCTTTGCTAAAAATAGAAAGGATGGTGTGCGAATCTAAAAATAGAAAGGATGG
JMFS003H12+           GGAGTTTGCTTTGCTAAAAATAGAAAGGATGGTGTCCGAATCTAAAAATAGAAAGGATGG
                      ____________________________________________________________
consensus             GGAGTTTGCTTTGCTAAAAATAGAAAGGATGGTGTGCGAATCTAAAAATAGAAAGGATGG
 
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JMSF013K05+           TGTGTGAATCAGTTAGAACTTAGAAGGGGGAGAGAGAAAGAGAGGCT             
JMFS003H12+           TGTGTGAATCAGTTAGAACTTAGAAGGGGGAGAGAGAAAGAGAGGCTGTGGAGCTCTTTA
                      ____________________________________________________________
consensus             TGTGTGAATCAGTTAGAACTTAGAAGGGGGAGAGAGAAAGAGAGGCTGTGGAGCTCTTTA
 
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JMFS003H12+           ATCTACAGAAGAAGATATGTAGGTAAAGATTGAAGCCAATGGGTGATATGGTAGATTCAG
                      ____________________________________________________________
consensus             ATCTACAGAAGAAGATATGTAGGTAAAGATTGAAGCCAATGGGTGATATGGTAGATTCAG