Contig 007564:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS001F02Sequence614007564 (3)emb|CDP12023.1|2e-07unnamed protein product [Coffea canephora]
JMFS147G02Sequence626007564 (3)emb|CDP12023.1|2e-16unnamed protein product [Coffea canephora]
JMSF013I08Sequence256007564 (3)756023477ref|XP_009628340.1|187PREDICTED: uncharacterized protein LOC104118723 [Nicotiana tomentosiformis] ref|

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS147G02+                                                                 GATGAA
                      ____________________________________________________________
consensus                                                                   GATGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS147G02+           AATTGATCTCAGTGAAGTCTTCGTTTATGCACAATACCTCCCTTCCATGTTTGGGCTTTC
JMFS001F02+                                                             TTGGGCTTTC
                      ____________________________________________________________
consensus             AATTGATCTCAGTGAAGTCTTCGTTTATGCACAATACCTCCCTTCCATGTTTGGGCTTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS147G02+           CCCTCAGTGTTCTCTTGTCAACTTTTGGGCAATGCCGGGGAGCTGGAAGAACAGTCGTTG
JMFS001F02+           CCCTCAGTGTTCTCTTGTCAACTTTTGGGCAATGCCGGGGAGCTGGAAGAACAGTCGTTG
                      ____________________________________________________________
consensus             CCCTCAGTGTTCTCTTGTCAACTTTTGGGCAATGCCGGGGAGCTGGAAGAACAGTCGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS147G02+           GACTTCCATCCACCACGCAATACTTGTCGAACTCCAACTCCATCTCGGATCACATCACTA
JMFS001F02+           GACTTCCATCCACCACGCAATACTTGTCGAACTCCAACTCCATCTCGGATCACATCACTA
                      ____________________________________________________________
consensus             GACTTCCATCCACCACGCAATACTTGTCGAACTCCAACTCCATCTCGGATCACATCACTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS147G02+           GATCTATAACCTTAGTACAATTGCAATGCAAGAAAAGACAAGAAAACAGCACAGACTGAT
JMFS001F02+           GATCTATAACCTTAGTACAATTGCAATGCAAGAAAAGACAAGAAAACAGCACAGACTGAT
                      ____________________________________________________________
consensus             GATCTATAACCTTAGTACAATTGCAATGCAAGAAAAGACAAGAAAACAGCACAGACTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS147G02+           AATTGCAAAACAGCCCATACCCAACTTGATCTCACAGAAGTGAAGCCAAAGCAAACCCCA
JMFS001F02+           AATTGCAAAACAGCCCATACCCAACTTGATCTCACAGAAGTGAAGCCAAAGCAAACCCCA
                      ____________________________________________________________
consensus             AATTGCAAAACAGCCCATACCCAACTTGATCTCACAGAAGTGAAGCCAAAGCAAACCCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS147G02+           ACAACATCTGAACAAAACCAATCATTGCCTCTAATCTAATCTCTTGAGCTCAAAGCCTCA
JMFS001F02+           ACAACATCTGAACAAAACCAATCATTGCCTCTAATCTAATCTCTTGAGCTCAAAGCCTCA
                      ____________________________________________________________
consensus             ACAACATCTGAACAAAACCAATCATTGCCTCTAATCTAATCTCTTGAGCTCAAAGCCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS147G02+           TCATCCAAGAAAAAGCTCAATTGTTTCACTGTTGGGTATTCTTAAAAGCAAAGATACCAA
JMFS001F02+           TCATCCAAGAAAAAGCTCAATTGTTTCACTGTTGGGTATTCTTAAAAGCAAAGATACCAA
                      ____________________________________________________________
consensus             TCATCCAAGAAAAAGCTCAATTGTTTCACTGTTGGGTATTCTTAAAAGCAAAGATACCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS147G02+           AACCCCATATTACACACCAGCTAACATTCAGCTTCTGATTCAGCACTCAGCAGGTCAC  
JMFS001F02+           AACCCCATATTACACACCAGCTAACATTCAGCTTCTGATTCAGCACTCAGCAGGTCACCT
                      ____________________________________________________________
consensus             AACCCCATATTACACACCAGCTAACATTCAGCTTCTGATTCAGCACTCAGCAGGTCACCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS001F02+           GATTCTCAAAGAATCAAGAAAAGTAGGTGTGTAAACAAACACATATATATACATACACAC
                      ____________________________________________________________
consensus             GATTCTCAAAGAATCAAGAAAAGTAGGTGTGTAAACAAACACATATATATACATACACAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF013I08+                                                ACTTTATGGTGGGGGGGGTGGGT
JMFS001F02+           ACATATATATGTAAATGTAAATAGCATAAAGATACAAACTTTATGGTGGGGGGGGTGGGT
                      ____________________________________________________________
consensus             ACATATATATGTAAATGTAAATAGCATAAAGATACAAACTTTATGGTGGGGGGGGTGGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF013I08+           AGGGAGGGTGAAACTGGCACTCTCTCTCACATGAGGATTGAGGGACAGAGAGCT      
JMFS001F02+           AGGGAGGGTGAAACTGGCACTCTCTCTCACATGAGGATTGAGGGACAGAGAGCTGCCATG
                      ____________________________________________________________
consensus             AGGGAGGGTGAAACTGGCACTCTCTCTCACATGAGGATTGAGGGACAGAGAGCTGCCATG