Contig 007563:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044O18+                            ACCAAACAGTAATCACACCACAAATGAAATAAAAGCCAGATAT
                      ____________________________________________________________
consensus                              ACCAAACAGTAATCACACCACAAATGAAATAAAAGCCAGATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044O18+           CACTTTTGAATTAGGTTTATAAAATTCAAAGACTTGAACAGTAAAGCAAAAAGGGAACAG
                      ____________________________________________________________
consensus             CACTTTTGAATTAGGTTTATAAAATTCAAAGACTTGAACAGTAAAGCAAAAAGGGAACAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044O18+           ATAAACCAATGAAAGAAAGGTGGCATCTTTATGCCAGAGTTGCAAGCTCAAAACTGGAAT
                      ____________________________________________________________
consensus             ATAAACCAATGAAAGAAAGGTGGCATCTTTATGCCAGAGTTGCAAGCTCAAAACTGGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN030D04+            GAGAATAAAAGTCCCGCAATCCGATTACCCAGAAGTAAAAGCTTACTTAAATTGACGAG
JMSF044O18+           CGAGAATAAAAGTCCCGCAATCCGATTACCCAGAAGTAAAAGCTTACTTAAATTGACGAG
JMFN046P23+            GAGAATAAAAGTCCCGCAATCCGATTACCCAGAAGTAAAAGCTTACTTAAATTGACGAG
                      ____________________________________________________________
consensus             CGAGAATAAAAGTCCCGCAATCCGATTACCCAGAAGTAAAAGCTTACTTAAATTGACGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN030D04+           ACGAAAGGGTTGCTTCTAATCTCGGCGTGATCTTCATTCCCAAGGCTTTTGCAATCCAAT
JMSF044O18+           ACGAAAGGGTTGCTTCTAATCTCGGCGTGATCTTCATTCCCAAGGCTTTTGCAATCCAAT
JMFN046P23+           ACGAAAGGGTTGCTTCTAATCTCGGCGTGATCTTCATTCCCAAGGCTTTTGCAATCCAAT
                      ____________________________________________________________
consensus             ACGAAAGGGTTGCTTCTAATCTCGGCGTGATCTTCATTCCCAAGGCTTTTGCAATCCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN030D04+           CCACAGCCGCATCGAGGAGAAACTAAGAAATTATCGAGAGAGAAGCTAGCAGAAGCAATC
JMSF044O18+           CCACAGCCGCATCGAGGAGAAACTAAGAAATTATCGAGAGAGAAGCTAGCAGAAGCAATC
JMFN046P23+           CCACAGCCGCATCGAGGAGAAACTAAGAAATTATCGAGAGAGAAGCTAGCAGAAGCAATC
                      ____________________________________________________________
consensus             CCACAGCCGCATCGAGGAGAAACTAAGAAATTATCGAGAGAGAAGCTAGCAGAAGCAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN030D04+           CCCACCGAGAATTGAAGATCGTTTCCGCTCCGAATAACCTCCACGATGTTTAACCACAAG
JMSF044O18+           CCCACCGAGAATTGAAGATCGTTTCCGCTCCGAATAACCTCCACGATGTTTAACCACAAG
JMFN046P23+           CCCACCGAGAATTGAAGATCGTTTCCGCTCCGAATAACCTCCACGATGTTTAACCACAAG
                      ____________________________________________________________
consensus             CCCACCGAGAATTGAAGATCGTTTCCGCTCCGAATAACCTCCACGATGTTTAACCACAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN030D04+           AAGAAAACTTTGACGCTGACGCCGCTGAGGTTCGTTATACGGTCCTTCTGTATGTAGCCG
JMSF044O18+           AAGAAAACTTTGACGCTGACGCCGCTGAGGTTCGTTATACGGTCCTTCTGTATGTAGCCG
JMFN046P23+           AAGAAAACTTTGACGCTGACGCCGCTGAGGTTCGTTATACGGTCCTTCTGTATGTAGCCG
                      ____________________________________________________________
consensus             AAGAAAACTTTGACGCTGACGCCGCTGAGGTTCGTTATACGGTCCTTCTGTATGTAGCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN030D04+           GATATTCTCGACTTATATTTGAGTTGATAAGAGCCTTCAAGAGAGAAACTGCACGAGTCC
JMSF044O18+           GATATTCTCGACTTATATTTGAGTTGATAAGAGCCTTCAAGAGAGAAACTGCACGAGTCC
JMFN046P23+           GATATTCTCGACTTATATTTGAGTTGATAAGAGCCTTCAAGAGAGAAACTGCACGAGTCC
                      ____________________________________________________________
consensus             GATATTCTCGACTTATATTTGAGTTGATAAGAGCCTTCAAGAGAGAAACTGCACGAGTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN030D04+           TTGAGGTAAGCATCGAATTTCCCAGTGTTCCAATCGATATCGTATCCAGTGATGCCCACA
JMSF044O18+           TTGAGGTAAGCATCGAATTTCCCAGTGTTCCAATCGATATCGTATCCAGCGATGCCCACA
JMFN046P23+           TTGAGGTAAGCATCGAATTTCCCAGTGTTCCAATCGATATCGTATCCAGTGATGCCCACA
                      ____________________________________________________________
consensus             TTGAGGTAAGCATCGAATTTCCCAGTGTTCCAATCGATATCGTATCCAGTGATGCCCACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN030D04+           GGGAGGATACCTCTGGGGAAGTCGAAGGATTCAATTACTTCGTAGACGGAGGGAAAATCA
JMSF044O18+           GGGAGGATACCTCTGGGGAAGTCGAAGGATTCAATTACTTCGTAGACGGAGGGAAAATCA
JMFN046P23+           GGGAGGATACCTCTGGGGAAGTCGAAGGATTCAATTACTTCGTAGACGGAGGGAAAATCA
                      ____________________________________________________________
consensus             GGGAGGATACCTCTGGGGAAGTCGAAGGATTCAATTACTTCGTAGACGGAGGGAAAATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN030D04+           TCGCCGCCGTCGCTAGCGGAGGAAAGGATTGCGAGGGAGGTGAGGATGACAAAGGAAA  
JMSF044O18+           TCGCCGCCGTCGCTAGCGGAGGAAAGGATTGCGAGGGAGGTGAGGATGACAAAGGAAACC
JMFN046P23+           TCGCCGCCGTCGCTAGCGGAGGAAAGGATTGCGAGGGAGGTGAGGATGACAAAGGAAACC
                      ____________________________________________________________
consensus             TCGCCGCCGTCGCTAGCGGAGGAAAGGATTGCGAGGGAGGTGAGGATGACAAAGGAAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044O18+           GTGATCTGGTGGCATCTTGCCGACATTATTGCGGGCTGT                     
JMFN046P23+           GTGATCTGGTGGCATCTTGCCGACATTATTGCGGGCTGTGGAGTTTATCTCGGGAAGAAA
                      ____________________________________________________________
consensus             GTGATCTGGTGGCATCTTGCCGACATTATTGCGGGCTGTGGAGTTTATCTCGGGAAGAAA