| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004J18 | Sequence | 526 | 007562 (7) | ref|XP_009604492.1| | 4e-85 | PREDICTED: UMP-CMP kinase 3 {ECO:0000255|HAMAP-Rule:MF_03172} isoform X2 [Nicot | 784 | 007562 (7) | ref|XP_006354631.1| | 1e-95 | PREDICTED: UMP-CMP kinase-like [Solanum tuberosum] |
| JMFF030N02 | Sequence | 498 | 007562 (7) | ref|XP_009604492.1| | 2e-78 | PREDICTED: UMP-CMP kinase 3 {ECO:0000255|HAMAP-Rule:MF_03172} isoform X2 [Nicot | 688 | 007562 (7) | ref|XP_006354631.1| | 1e-87 | PREDICTED: UMP-CMP kinase-like [Solanum tuberosum] |
| JMFF040G11 | Sequence | 543 | 007562 (7) | ref|XP_009604492.1| | 1e-88 | PREDICTED: UMP-CMP kinase 3 {ECO:0000255|HAMAP-Rule:MF_03172} isoform X2 [Nicot | 749 | 007562 (7) | ref|XP_009604492.1| | 3e-123 | PREDICTED: UMP-CMP kinase 3 {ECO:0000255|HAMAP-Rule:MF_03172} isoform X2 [Nicot |
| JMFN046N15 | Sequence | 548 | 007562 (7) | ref|XP_006354631.1| | 6e-45 | PREDICTED: UMP-CMP kinase-like [Solanum tuberosum] | |||||
This contig is upended
. : . : . : . : . : . :
JMFF030N02- TTTCCC
JMFF004J18- GCACCCATTTCCC
JMFF040G11- TTTCCC
____________________________________________________________
consensus GCACCCATTTCCC
. : . : . : . : . : . :
JMFF030N02- TTGTCTTTCTCCCAGATCTCCATTTCCCTCCCTCCTCTCGCCCTGATTATTCGTCGAGCT
JMFF004J18- TTGTCTTTCTCCCAGATCTCCATTTCCCTCCCTCCTCTCGCCCTGATTATTCGTCGAGCT
JMFF040G11- TTGTCTTTCTCCCAGATCTCCATTTCCCTCCCTCCTCTCGCCCTGATTATTCGTCGAGCT
____________________________________________________________
consensus TTGTCTTTCTCCCAGATCTCCATTTCCCTCCCTCCTCTCGCCCTGATTATTCGTCGAGCT
. : . : . : . : . : . :
JMFF030N02- AGTTTTTGCCATTCATGGGGACTGTTATTGATTCTGCAAACAAGGGAGCAAATGGAAGCA
JMFF004J18- AGTTTTTGCCATTCATGGGGACTGTTATTGATTCTGCAAACAAGGGAGCAAATGGAAGCA
JMFF040G11- AGTTTTTGCCATTCATGGGGACTGTTATTGATTCTGCAAACAAGGGAGCAAATGGAAGCA
rJMFF040G11+ CATGGGGACTGTTATTGATTCTGCAAACAAGGGAGCAAATGGAAGCA
____________________________________________________________
consensus AGTTTTTGCCATTCATGGGGACTGTTATTGATTCTGCAAACAAGGGAGCAAATGGAAGCA
. : . : . : . : . : . :
JMFF030N02- TCCCCACTGACAAAAAGGTTAAGGTTGTGTTTGTCCTAGGTGGCCCGGGAAGTGGTAAGG
JMFF004J18- TCCCCACTGACAAAAAGGTTAAGGTTGTGTTTGTCCTAGGTGGCCCGGGAAGTGGTAAGG
JMFF040G11- TCCCCACTGACAAAAAGGTTAAGGTTGTGTTTGTCCTAGGTGGCCCGGGAAGTGGTAAGG
rJMFF040G11+ TCCCCACTGACAAAAAGGTTAAGGTTGTGTTTGTCCTAGGTGGCCCGGGAAGTGGTAAGG
____________________________________________________________
consensus TCCCCACTGACAAAAAGGTTAAGGTTGTGTTTGTCCTAGGTGGCCCGGGAAGTGGTAAGG
. : . : . : . : . : . :
JMFF030N02- GCACACAGTGTGCAAAAATTGTTGAAAACTTCGGGTA-CACCCATCTAAGTGCTGGGGAT
JMFF004J18- GCACACAGTGTGCAAAAATTGTTGAAAACTTCGGGTA-CACCCATCTAAGTGCTGGGGAT
JMFF040G11- GCACACAGTGTGCAAAAATTGTTGAAAACTTCGGGTA-CACCCATCTAAGTGCTGGGGAT
rJMFF040G11+ GCACACAGTGTGCAAAAATTGTTGAAAACTTCGGGTA-CACCCATCTAAGTGCTGGGGAT
rJMFF004J18+ CAGTGTGCAAAAATTGTTGAAAACTTCGGGTACCACCCATCTAAGTGCTGGGGAT
____________________________________________________________
consensus GCACACAGTGTGCAAAAATTGTTGAAAACTTCGGGTA-CACCCATCTAAGTGCTGGGGAT
. : . : . : . : . : . :
JMFF030N02- CTCCTTCGAGCAGAGATCAAGTCTGGTTCTGAAAATGGGACAATGATTCAAAACATGATC
JMFF004J18- CTCCTTCGAGCAGAGATCAAGTCTGGTTCTGAAAATGGGACAATGATTCAAAACATGATC
JMFF040G11- CNCCTTCGAGCAGAGATCAAGTCTGGTTCTGAAAATGGGACAATGATTCAAAACATGATC
rJMFF040G11+ CTCCTTCGAGCAGAGATCAAGTCTGGTTCTGAAAATGGGACAATGATTCAAAACATGATC
rJMFF030N02+ TTCGAGCAGAGATCAAGTCTGGTTCTGAAAATGGGACAATGATTCAAAACATGATC
rJMFF004J18+ CTCCTTCGAGCAGAGATCAAGTCTGGTTCTGAAAATGGGACAATGATTCAAAACATGATC
____________________________________________________________
consensus CTCCTTCGAGCAGAGATCAAGTCTGGTTCTGAAAATGGGACAATGATTCAAAACATGATC
. : . : . : . : . : . :
JMFF030N02- AAAGAGGGAAAAATTGTGCCTTCTGAAGTAACAATTGCTCTCCTCCAACGTGCAATACAA
JMFF004J18- AAAGAGGGAAAAATTGTGCCTTCTGAAGTAACAATTGCTCTCCTCCAACGTGCAATACAA
JMFF040G11- AAAGAGGGAAAAATTGTGCCTTCTGAAGTAACAATTGCTCTCCTCCAACGTGCAATACAA
rJMFF040G11+ AAAGAGGGAAAAATTGTGCCTTCTGAAGTAACAATTGCTCTCCTCCAACGTGCAATACAA
rJMFF030N02+ AAAGAGGGAAAAATTGTGCCTTCTGAAGTAACAATTGCTCTCCTCCAACGTGCAATACAA
rJMFF004J18+ AAAGAGGGAAAAATTGTGCCTTCTGAAGTAACAATTGCTCTCCTCCAACGTGCAATACAA
____________________________________________________________
consensus AAAGAGGGAAAAATTGTGCCTTCTGAAGTAACAATTGCTCTCCTCCAACGTGCAATACAA
. : . : . : . : . : . :
JMFF030N02- GAACATGAGAACGACAAGTTTCTTATTGATGGCTTCCCTCGCAACGAGGAAAACCGTGAA
JMFF004J18- GAACATGAGAACGACAAGTTTCTTATTGATGGCTTCCCTCGCAACGAGGAAAACCGTGAA
JMFF040G11- GAACATGAGAACGACAAGTTTCTTATTGATGGCTTCCCTCGCAACGAGGAAAACCGTGAA
rJMFF040G11+ GAACATGAGAACGACAAGTTTCTTATTGATGGCTTCCCTCGCAACGAGGAAAACCGTGAA
rJMFF030N02+ GAACATGAGAACGACAAGTTTCTTATTGATGGCTTCCCTCGCAACGAGGAAAACCGTGAA
rJMFF004J18+ GAACATGAGAACGACAAGTTTCTTATTGATGGCTTCCCTCGCAACGAGGAAAACCGTGAA
JMFN046N15+ ACCGTGAA
____________________________________________________________
consensus GAACATGAGAACGACAAGTTTCTTATTGATGGCTTCCCTCGCAACGAGGAAAACCGTGAA
. : . : . : . : . : . :
JMFF030N02- GCTTTTGAGCGTGTTACTGGAATTCTGCCCGAATTTGTCCTCTTCTTTGAATGTCCTGAA
JMFF004J18- GCTTTTGAGCGTGTTACTGGAATTCTGCCCGAATTTGTCCTCTTCTTTGAATGTCCTGAA
JMFF040G11- GCTTTTGGGCGTGTTACTGGAATTCTGCCCGAATTTGTCCTCTTCTTTGAATGTCCTGAA
rJMFF040G11+ GCTTTTGGGCGTGTTACTGGAATTCTGCCCGAATTTGTCCTCTTCTTTGAATGTCCTGAA
rJMFF030N02+ GCTTTTGAGCGTGTTACTGGAATTCTGCCCGAATTTGTCCTCTTCTTTGAATGTCCTGAA
rJMFF004J18+ GCTTTTGAGCGTGTTACTGGAATTCTGCCCGAATTTGTCCTCTTCTTTGAATGTCCTGAA
JMFN046N15+ GCTTNTGAGCGTGTTACTGGAATTCTGCCCGAATTTGTCCTCTTCTTTGAATGTCCTGAA
____________________________________________________________
consensus GCTTTTGAGCGTGTTACTGGAATTCTGCCCGAATTTGTCCTCTTCTTTGAATGTCCTGAA
. : . : . : . : . : . :
JMFF030N02- GAAGAG
JMFF004J18- GAAGAGATGGAGAAGCGTCTTTTGGGTCGGAATC
JMFF040G11- GAAGAGATGGAGAAGCGTCTTTTGGGTCGGAATCAGGGAAGAGAAGATGACAACAT
rJMFF040G11+ GAAGAGATGGAGAAGCGTCTTTTGGGTCGGAATCAGGGAAGAGAAGATGACAACATAGAA
rJMFF030N02+ GAAGAGATGGAGAAGCGTCTTTTGGGTCGGAATCAGGGAAGAGAAGATGACAACATAGAA
rJMFF004J18+ GAAGAGATGGAGAAGCGTCTTTTGGGTCGGAATCAGGGAAGAGAAGATGACAACATAGAA
JMFN046N15+ GAAGAGATGGAGAAGCTTCTTTTGGGTCGGAATCAGGGAAGAGAAGATGCCAACATAGAA
____________________________________________________________
consensus GAAGAGATGGAGAAGCGTCTTTTGGGTCGGAATCAGGGAAGAGAAGATGACAACATAGAA
. : . : . : . : . : . :
rJMFF040G11+ ACAATAAGGAAGCGATTTAATGTTTACATGGAATCTAGCCTCCCTGTTATTGAATATTAC
rJMFF030N02+ ACAATAAGGAAGCGATTTAATGTTTACATGGAATCTAGCCTCCCTGTTATTGAATATTAC
rJMFF004J18+ ACAATAAGGAAGCGATTTAATGTTTACATGGAATCTAGCCTCCCTGTTATTGAATATTAC
JMFN046N15+ ACAATAAGGAAGCGATTTAATGTTTACATGGAATCTAGCCTCCCTGTTATTGAATATTAC
____________________________________________________________
consensus ACAATAAGGAAGCGATTTAATGTTTACATGGAATCTAGCCTCCCTGTTATTGAATATTAC
. : . : . : . : . : . :
rJMFF040G11+ AAGTCAAAGGGAAAGGTTCAAAAGATCGATGCTGCCAAGCCTGCTGATGAAGTTTTTGAA
rJMFF030N02+ AAGTCAAAGGGAAAGGTTCAAAAGATCGATGCTGCCAAGCCTGCTGATGAAGTTTTTGAA
rJMFF004J18+ AAGTCAAAGGGAAAGGTTCAAAAGATCGATGCTGCCAAGCCTGCTGATGAAGTTTTTGAA
JMFN046N15+ AAGTCAAAGGGAAAGGTTCAAAAGATCGATGCTGCCAAGCCTGCTGATGAAGTTTTTGAA
____________________________________________________________
consensus AAGTCAAAGGGAAAGGTTCAAAAGATCGATGCTGCCAAGCCTGCTGATGAAGTTTTTGAA
. : . : . : . : . : . :
rJMFF040G11+ GCGGTTAAAGCTTTGTTCACACCATCAGATGCAAAGGTTGCTGGAGCTTGAGGAATGTAA
rJMFF030N02+ GCGGTTAAAGCTTTGTTCACACCATCAGATGCAAAGGTTGCTGGAGCTTGAGGAATGTAA
rJMFF004J18+ GCGGTTAAAGCTTTGTTCACACCATCAGATGCAAAGGTTGCTGGAGCTTGAGGAATGTAA
JMFN046N15+ GCGGTTAAAGCTTTGTTCACACCATCAGATGCAAAGGTTGCTGGAGCTTGAGGAATGTAA
____________________________________________________________
consensus GCGGTTAAAGCTTTGTTCACACCATCAGATGCAAAGGTTGCTGGAGCTTGAGGAATGTAA
. : . : . : . : . : . :
rJMFF040G11+ GGCGAGATGCCAGATTNCTTGTTGTTGCAGGGAGTTGGTTTGTGTTGTGTATCTGTGATA
rJMFF030N02+ GGCGAGATGCCAGATTTCTTGTTGTTGCAGGGAGTTGGTTTGTGTTGTGTATCTGTGATA
rJMFF004J18+ GGCGAGATGCCAGATTTCTTGTTGTTGCAGGGAGTTGGTTTGTGTTGTGTATCTGTGATA
JMFN046N15+ GGCGAGATGCCAGATTTCTTGTTGTTGCAGGGAGTTGGTTTGTGTTGTGTATCTGTGATA
____________________________________________________________
consensus GGCGAGATGCCAGATTTCTTGTTGTTGCAGGGAGTTGGTTTGTGTTGTGTATCTGTGATA
. : . : . : . : . : . :
rJMFF040G11+ GAGATGATTATATACAGATGGTT
rJMFF030N02+ GAGATGATTATATACAGATGGTTACAATATTCTTTTTTAGTTAAAACCATATAATATATG
rJMFF004J18+ GAGATGATTATATACAGATGGTTACAATATTCTTTTTTAGTTAAAACCATATAATATATG
JMFN046N15+ GAGATGATTATATACAGATGGTTACAATATTCTTTTTTAGTTAAAACCATATAATATATG
____________________________________________________________
consensus GAGATGATTATATACAGATGGTTACAATATTCTTTTTTAGTTAAAACCATATAATATATG
. : . : . : . : . : . :
rJMFF030N02+ TTGAAGTTGAGTGAGGTTATTGCCTCTTTGTTGCCATTAGTTATATGGATGAATGGATGA
rJMFF004J18+ TTGAAGTTGAGTGAGGTTATTGCCTCTTTGTTGCCATTAGTTATATGGATGAATGGATGA
JMFN046N15+ TTGAAGTTGAGTGAGGTTATTGCCTCTTTGTTGCCATTAGTTATATGGATGAATGGATGA
____________________________________________________________
consensus TTGAAGTTGAGTGAGGTTATTGCCTCTTTGTTGCCATTAGTTATATGGATGAATGGATGA
. : . : . : . : . : . :
rJMFF030N02+ ACTGTGAGAAATAATGTACTGTATGATTACAT
rJMFF004J18+ ACTGTGAGAAATAATGTACTGTATGATTACATTGAGAATTGAGAATT
JMFN046N15+ ACTGTGAGAAATAATGTACTGTATGATTACATTGAGAATTGAGAATTTTGTGTTTGGCCT
____________________________________________________________
consensus ACTGTGAGAAATAATGTACTGTATGATTACATTGAGAATTGAGAATTTTGTGTTTGGCCT