Contig 007557:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN043N15Sequence640007557 (2)
JMSF026N03Sequence632007557 (2)ref|XP_010325895.1|5e-111PREDICTED: uncharacterized protein LOC101244408 isoform X2 [Solanum lycopersicu733007131 (2)ref|XP_009801679.1|4e-74PREDICTED: uncharacterized protein LOC104247378 isoform X3 [Nicotiana sylvestri

Alignment

This contig is upended


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JMSF026N03+                                                                  CTCTT
                      ____________________________________________________________
consensus                                                                    CTCTT
 
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JMSF026N03+           CCACACACTTCTGGAGTATGTCATGAGCTGTTGAAACAAATCTAGCTGCCTTGACATTGG
                      ____________________________________________________________
consensus             CCACACACTTCTGGAGTATGTCATGAGCTGTTGAAACAAATCTAGCTGCCTTGACATTGG
 
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JMSF026N03+           AAGGGTTCACCAGCCATCTGCTGTATTTGATGAAACTCTGGATCCAGTAAGAGCAGACAT
                      ____________________________________________________________
consensus             AAGGGTTCACCAGCCATCTGCTGTATTTGATGAAACTCTGGATCCAGTAAGAGCAGACAT
 
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JMSF026N03+           CCAACACTAAGAGGACAGCCTCAGCGTTTGGGGGAACTTCTTCATTACTTTTGTGCTCGG
                      ____________________________________________________________
consensus             CCAACACTAAGAGGACAGCCTCAGCGTTTGGGGGAACTTCTTCATTACTTTTGTGCTCGG
 
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JMSF026N03+           ACTTATACTTGGTATTACTGCTAAATCCAGGATAAAAAGGAAGCCAGTCGAGCTCTTCAC
                      ____________________________________________________________
consensus             ACTTATACTTGGTATTACTGCTAAATCCAGGATAAAAAGGAAGCCAGTCGAGCTCTTCAC
 
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JMSF026N03+           ACACAACCTCTACATACAGTTGATAAGAACTTATTGAAGAAAGCTGAGGATAATAGAGCA
                      ____________________________________________________________
consensus             ACACAACCTCTACATACAGTTGATAAGAACTTATTGAAGAAAGCTGAGGATAATAGAGCA
 
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JMSF026N03+           CACTGCCTCCAATTAGGTACCTGACAAGCCCTTCAATGGGCTCAAGTCCTTCAATAGGCT
                      ____________________________________________________________
consensus             CACTGCCTCCAATTAGGTACCTGACAAGCCCTTCAATGGGCTCAAGTCCTTCAATAGGCT
 
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JMSF026N03+           TGTCCATAGCACCAAACCCATTTGCAGAAAGAAACGATTGTGTAGTTCTCCCCAAGGCAA
                      ____________________________________________________________
consensus             TGTCCATAGCACCAAACCCATTTGCAGAAAGAAACGATTGTGTAGTTCTCCCCAAGGCAA
 
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JMSF026N03+           TAAAGAACCCAAATATAGCCAAGTCCTTCTCAAGTATCTCAATACTCTCAGATGTTGTGA
JMFN043N15+                                                CTCAATACTCTCAGATGTTGTGA
                      ____________________________________________________________
consensus             TAAAGAACCCAAATATAGCCAAGTCCTTCTCAAGTATCTCAATACTCTCAGATGTTGTGA
 
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JMSF026N03+           ACCTGGACCATATTCTCTCCCGATCTATAGCTCTTTGTAGCTGCTTCTGGACAAG     
JMFN043N15+           ACCTGGACGATATTCTCTCCCGATCTATAGCTCTTTGTAGCTGCTTCTGGACAAGTTAGT
                      ____________________________________________________________
consensus             ACCTGGACGATATTCTCTCCCGATCTATAGCTCTTTGTAGCTGCTTCTGGACAAGTTAGT
 
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JMFN043N15+           GACACCCGCGCATATAACAAGATTGTGTGGAATACTATTCACGTCAACAGTATAGAACCG
                      ____________________________________________________________
consensus             GACACCCGCGCATATAACAAGATTGTGTGGAATACTATTCACGTCAACAGTATAGAACCG
 
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JMFN043N15+           CATACGGCGCTGGCGAGAAGGCAGCGGTGTCGCGAAGGAGTCCGGCGCGGCTGTGTCGCG
                      ____________________________________________________________
consensus             CATACGGCGCTGGCGAGAAGGCAGCGGTGTCGCGAAGGAGTCCGGCGCGGCTGTGTCGCG
 
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JMFN043N15+           GAGTAGCAGTGGTGTCCGGTGTCCAGCGCGGCTGTCGCTGTGTGGCTGACCGGTGGAGCC
                      ____________________________________________________________
consensus             GAGTAGCAGTGGTGTCCGGTGTCCAGCGCGGCTGTCGCTGTGTGGCTGACCGGTGGAGCC
 
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JMFN043N15+           TATGGTGCGGAGAGCGAAGGGGCGGTGTGGCGGTAGCTGTCCAGCGCGGTGCGGGGTGGT
                      ____________________________________________________________
consensus             TATGGTGCGGAGAGCGAAGGGGCGGTGTGGCGGTAGCTGTCCAGCGCGGTGCGGGGTGGT
 
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JMFN043N15+           GGAGCGGTGTCGCGGTGTGATGTGGCGATGGCGGCATGTCACGACGGCGGCGTGTGGCGG
                      ____________________________________________________________
consensus             GGAGCGGTGTCGCGGTGTGATGTGGCGATGGCGGCATGTCACGACGGCGGCGTGTGGCGG
 
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JMFN043N15+           TGAATATGGCGTGGGCGGGAGACAGTGCTGCAATTTGGATCAATTTTGGACTAGAATGAA
                      ____________________________________________________________
consensus             TGAATATGGCGTGGGCGGGAGACAGTGCTGCAATTTGGATCAATTTTGGACTAGAATGAA