Contig 007556:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031A19+                AAACATGAAACATCCTTATCAAGAATTCCCAAATCCTAAAACAACAGTTGTTACC
JMFN043E13+                                                         CAACAGTTGTTACC
                      ____________________________________________________________
consensus                  AAACATGAAACATCCTTATCAAGAATTCCCAAATCCTAAAACAACAGTTGTTACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031A19+           TAAACATTGACAATTAGTTCTTGATCACAAGAACAAGTTCTGTAACAATCAACATTTCAC
JMFN043E13+           TAAACATTGACAATTAGTTCTTGATCACAAGAACAAGTTCTGTAACAATGAACATTTCAC
                      ____________________________________________________________
consensus             TAAACATTGACAATTAGTTCTTGATCACAAGAACAAGTTCTGTAACAATGAACATTTCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031A19+           AGGACCGTCCAGAAGAAAAGGATTGATTATCCAAATGCAGGCTGTGGGCAAAAAGTTCAG
JMFN043E13+           AGGACCGTCCAGAAGAAAAGGATTGATTATCCAAATGCAGGCTGTGGGCAAAAAGTTCAG
                      ____________________________________________________________
consensus             AGGACCGTCCAGAAGAAAAGGATTGATTATCCAAATGCAGGCTGTGGGCAAAAAGTTCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031A19+           CTTTATTGCGATTTTGCAGCAGTGAAATTCAACATGAGGCAAATACCCGGTCTAAAAACA
JMFN043E13+           CTTTATTGCGATTTTGCAGCAGTGAAATTCAACATGAGGCAAATACCCGGTCTAAAAACA
                      ____________________________________________________________
consensus             CTTTATTGCGATTTTGCAGCAGTGAAATTCAACATGAGGCAAATACCCGGTCTAAAAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031A19+           GTTCAAAAGTAGTTGCTTTTGTAGAAGTTTTTAAGGAAATTGGAGGAGCCTTGGTCTTTG
JMFN043E13+           GTTCAAAAGTAGTTGCTTTTGTAGAAGTTTTTAAGGAAATTGGAGGAGCCTTGGTCTTTG
                      ____________________________________________________________
consensus             GTTCAAAAGTAGTTGCTTTTGTAGAAGTTTTTAAGGAAATTGGAGGAGCCTTGGTCTTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031A19+           GCATCCCCGTCCTGCATGAAATCTTCATGGCCCGTGACATATTGACCAATGATGTGGTGC
JMFN043E13+           GCATCCCCGTCCTGCATGAAATCTTCATGGCCCGTGACATATTGACCAATGATGTGGTGC
                      ____________________________________________________________
consensus             GCATCCCCGTCCTGCATGAAATCTTCATGGCCCGTGACATATTGACCAATGATGTGGTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031A19+           CTTTGCTTCGAGTGGTCCACGACATTCTTCAGCTCCTCCATCCCCTTGAACAGCAGCATA
JMFN043E13+           CTTTGCTTCGAGTGGTCCACGACATTCTTCAGCTCCTCCATCCCCTTGAACAGCAGCATA
                      ____________________________________________________________
consensus             CTTTGCTTCGAGTGGTCCACGACATTCTTCAGCTCCTCCATCCCCTTGAACAGCAGCATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031A19+           TCAATCACCTTAGGGTTAGTGACGCTGGCGTTACGGCGGAATTCAGAAGTAATGGCAGAG
JMFN043E13+           TCAATCACCTTAGGGTTAGTGACGCTGGCGTTACGGCGGAATTCAGAAGTAATGGCAGAG
                      ____________________________________________________________
consensus             TCAATCACCTTAGGGTTAGTGACGCTGGCGTTACGGCGGAATTCAGAAGTAATGGCAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031A19+           CGGAGTTTGGAGGGGTTAACGACGTCGTAGAGATTGTAGATTTCCATAACCTGAGGAATA
JMFN043E13+           CGGAGTTTGGAGGGGTTAACGACGTCGTAGAGATTGTAGATTTCCATAACCTGAGGAATA
                      ____________________________________________________________
consensus             CGGAGTTTGGAGGGGTTAACGACGTCGTAGAGATTGTAGATTTCCATAACCTGAGGAATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031A19+           GATCTACAGCACATCCGGAAGAAATCGAAGGTCCGGTGGCGAGCCTCCTCCAGGCTCATC
JMFN043E13+           GATCTACAGCACATCCGGAAGAAATCGAAGGTCCGGTGGCGAGCCTCCTCCAGGCTCATC
                      ____________________________________________________________
consensus             GATCTACAGCACATCCGGAAGAAATCGAAGGTCCGGTGGCGAGCCTCCTCCAGGCTCATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031A19+           GAGTTCGGCGGAACCTTAAACTGCTTCATCAAATGCGCCATCG                 
JMFN043E13+           GAGTTCGGCGGAACCTTAAACTGCTTCATCAAATGCGCCATCGCCGAGGAGCGGATGAGA
                      ____________________________________________________________
consensus             GAGTTCGGCGGAACCTTAAACTGCTTCATCAAATGCGCCATCGCCGAGGAGCGGATGAGA