Contig 007554:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046G22Sequence598007554 (5)ref|XP_009597028.1|6e-88PREDICTED: brassinosteroid-regulated protein BRU1-like [Nicotiana tomentosiform535007554 (5)gb|AFR46576.1|1e-48xyloglucan endotransglucosylase/hydrolase 7, partial [Rosa x borboniana]
JMFN011L13Sequence620007554 (5)ref|XP_009597028.1|1e-109PREDICTED: brassinosteroid-regulated protein BRU1-like [Nicotiana tomentosiform
JMFN041P22Sequence604007554 (5)ref|XP_004303861.2|4e-57PREDICTED: xyloglucan endotransglucosylase/hydrolase 2-like [Fragaria vesca sub
JMFS142A04Sequence625007554 (5)ref|XP_004303861.2|2e-63PREDICTED: xyloglucan endotransglucosylase/hydrolase 2-like [Fragaria vesca sub

Alignment

This contig is upended


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JMFF046G22-                                                           ATTCCATTCCAT
                      ____________________________________________________________
consensus                                                             ATTCCATTCCAT
 
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JMFF046G22-           CANAGTAATTCCCTTTCCCAAAAAATCACCAGAAAGCTAAGATATGAAGTCTTCTTCTTC
JMFN011L13-                                                   GATATGAAGTCTTCTTCTTC
                      ____________________________________________________________
consensus             CANAGTAATTCCCTTTCCCAAAAAATCACCAGAAAGCTAAGATATGAAGTCTTCTTCTTC
 
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JMFF046G22-           TTCAAGATCAGTTCCCACCATGTTTTTGCAGCTCACAGTGCTCCTTGCTTTCATCATCCT
JMFN011L13-           TTCAAGATCAGTTCCCACCATGTTTTTGCAGCTCACAGTGCTCCTTGCTTTCATCATCCT
                      ____________________________________________________________
consensus             TTCAAGATCAGTTCCCACCATGTTTTTGCAGCTCACAGTGCTCCTTGCTTTCATCATCCT
 
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JMFF046G22-           CTCAGCTTCCGCTGGGAATTTCTACCAAGACGTTCAGATCACTTTTGGAGGCGATCAGCG
JMFN011L13-           CTCAGCTTCCGCTGGGAATTTCTACCAAGACGTTCAGATCACTTTTGGAGGCGATCAGCG
                      ____________________________________________________________
consensus             CTCAGCTTCCGCTGGGAATTTCTACCAAGACGTTCAGATCACTTTTGGAGGCGATCAGCG
 
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JMFF046G22-           CGCTAAGATACAGGAGGGCGGCCGCCTTCTCGACTTGACTCTAGACCAGGCCTCTGGTTC
JMFN011L13-           CGCTAAGATACAGGAGGGCGGCCGCCTTCTGGACTTGACTCTAGACCAGGCCTCTGGTTC
                      ____________________________________________________________
consensus             CGCTAAGATACAGGAGGGCGGCCGCCTTCTGGACTTGACTCTAGACCAGGCCTCTGGTTC
 
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JMFF046G22-           CGGCTTCCAATCCAAAGACGAGTATTTGTTTGGGAGATTCGACATGCAGCTCAAGCTCGT
JMFN011L13-           CGGCTTCCAATCCAAAGACGAGTATTTGTTTGGGAGATTCGACATGCAACTCAAGCTCGT
                      ____________________________________________________________
consensus             CGGCTTCCAATCCAAAGACGAGTATTTGTTTGGGAGATTCGACATGCAGCTCAAGCTCGT
 
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JMFF046G22-           CCCTGGCAATTCTGCTGGCACTGTCACCACCTTTTATTTATCGTCTCTAGGAGCAGGACA
JMFN011L13-           TCCTGGCAATTCTGCTGGCACTGTCACTACCTTTTATTTATCGTCTCTAGGACCAGGACA
                      ____________________________________________________________
consensus             TCCTGGCAATTCTGCTGGCACTGTCACTACCTTTTATTTATCGTCTCTAGGAGCAGGACA
 
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JMFF046G22-           TGACGAGATTGACTTCGAGTTCCTGGGAAATTCTTCGGGACAACCTTACACAATCCACAC
JMFN011L13-           TGACGAGATTGATTTCGAGTTCCTGGGAAATTCTTCTGGACAACCTTACACAATCCACAC
                      ____________________________________________________________
consensus             TGACGAGATTGATTTCGAGTTCCTGGGAAATTCTTCTGGACAACCTTACACAATCCACAC
 
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JMFF046G22-           CAATGTCTACTCCCAAGGAAAAGGTGGTAAAGAACAACAGTTCCACCCATGGTTCGACCC
JMFN011L13-           CAATGTCTACTCCCAAGGAAAAGGTGATAAAGAACAACAGTTCCACCCATGGTTCGACCC
                      ____________________________________________________________
consensus             CAATGTCTACTCCCAAGGAAAAGGTGGTAAAGAACAACAGTTCCACCCATGGTTCGACCC
 
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JMFF046G22-           CACAACTTCCTTCCACACCTACTCCATTCTTTGGAATCC                     
JMFN011L13-           CACAACTTCCTTCCACACCTACTCAATTCTTTGGAACTCTCAACGTATCATATTCTTGAT
JMFS142A04+                                                              ATTCTTGAT
JMFN041P22+                                                                   TGAT
                      ____________________________________________________________
consensus             CACAACTTCCTTCCACACCTACTCCATTCTTTGGAATTCTCAACGTATCATATTCTTGAT
 
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JMFN011L13-           AGATAACATTCCGATAAGAGTATTTGACAACAATGAAGCCATTGGCGTGCCATTCCCAAA
JMFS142A04+           AGATAACATTCCGATAAGAGTATTCAACAACAACGAAGCCATTGGCGTGCCATTCCCAAA
rJMFF046G22+                                                         TGCCATTCCCAAA
JMFN041P22+           AGATAACATTCCGATAAGAGTATTTGACAACAATGAAGCCATTGGCGTGCCATTCCCAAA
                      ____________________________________________________________
consensus             AGATAACATTCCGATAAGAGTATTTGACAACAATGAAGCCATTGGCGTGCCATTCCCAAA
 
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JMFN011L13-           GAACCAACCCATGAAGGTTTACGCCAGCCTTTGGAACGCA                    
JMFS142A04+           GAACCAACCCATGAAGGTTTACGCCAGCCTGTGGAACGCAGACGACTGGGCAACCCAGGG
rJMFF046G22+          GAACCAACCCATGAAGGTTTACGCCAGCCTGTGGAACGCAGACGACTGGGCAACCCAGGG
JMFN041P22+           GAACCAACCCATGAAGGTTTACGCCAGCCTTTGGAACGCAGACGACTGGGCAACGCAGGG
                      ____________________________________________________________
consensus             GAACCAACCCATGAAGGTTTACGCCAGCCTTTGGAACGCAGACGACTGGGCAACCCAGGG
 
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JMFS142A04+           CGGGCGGGTCAAAACGGATTGGACCAAGGCTCCATTCACGGCCTCTTACAGGAACTATAA
rJMFF046G22+          CGGGCGGGTCAAAACGGATTGGACCAAGGCTCCATTCACGGCCTCTTACAGGAACTATAA
JMFN041P22+           TGGGCGGGTTAAAACTGATTGGAGCAAGGCTCCATTCACGGCCTCTTACCGGAACTATAA
                      ____________________________________________________________
consensus             CGGGCGGGTCAAAACGGATTGGACCAAGGCTCCATTCACGGCCTCTTACAGGAACTATAA
 
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JMFS142A04+           CGCCAATGCTTGTGTTTGGTCAGCTCAGACATCAAGCTCATCATGTGGCAGTTCGACCCA
rJMFF046G22+          CGCCAATGCTTGTGTTTGGTCAGCTCAGACATCAAGCTCATCATGTGGCAGTTCGACCCA
JMFN041P22+           CGCCAATGCTTGTGTTTGGTCGGCTCAGTCATCGAGCTCATCGTGCGGCGGTTCGACCCA
                      ____________________________________________________________
consensus             CGCCAATGCTTGTGTTTGGTCAGCTCAGACATCAAGCTCATCATGTGGCAGTTCGACCCA
 
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JMFS142A04+           GTCTTCAACTGGCGCCCAGGCATGGCAGACTCAAAGCCTTGATGCTAAGGGCAGAAACAG
rJMFF046G22+          GTCTTCAACTGGCGCCCAGGCATGGCAGACTCAAAGCCTTGATGCTAAGGGCAGAAACAG
JMFN041P22+           GTCTTCAAGCGGTGGGCAGGCATGGCAGACCCAAGACGTTGATGCGAAGGGCAGAAACAG
                      ____________________________________________________________
consensus             GTCTTCAACTGGCGCCCAGGCATGGCAGACTCAAAGCCTTGATGCTAAGGGCAGAAACAG
 
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JMFS142A04+           ACTCCGATGGGTGCAACAGAAATTCATGATTTACAATTACTGTGCTGATGTTAAGAGGTT
rJMFF046G22+          ACTCCGATGGGTGCAACAGAAATTCATGATTTACAATTACTGTGCTGATGTTAAGAGGTT
JMFN041P22+           AATCCGATGGGTGCAACACAAATTCATGATTTATAATTACTGTGCTGATGTTAAGAGGTT
                      ____________________________________________________________
consensus             ACTCCGATGGGTGCAACAGAAATTCATGATTTACAATTACTGTGCTGATGTTAAGAGGTT
 
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JMFS142A04+           CCCTCAGGGTTTTCCTCCAGAATGCAAGCGCTCAAGGTTCTAAGTCCTA           
rJMFF046G22+          CCCTCAGGGTTTTCCTCCAGAATGCAAGCGCTCAAGGTTCTAAGTCCTA           
JMFN041P22+           TCCTCAGGGTCTTCCTCGAGAATGCAAGCGTTCAAGGTTCTAAGTCCTAGTGATTATTAG
                      ____________________________________________________________
consensus             CCCTCAGGGTTTTCCTCCAGAATGCAAGCGCTCAAGGTTCTAAGTCCTAGTGATTATTAG
 
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JMFN041P22+           ATTATGTTGTGGATGGATTCTTTTCCCTGTGAAAATTATTGTATTTGTTTTGTAGAAAGC
                      ____________________________________________________________
consensus             ATTATGTTGTGGATGGATTCTTTTCCCTGTGAAAATTATTGTATTTGTTTTGTAGAAAGC
 
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JMFN041P22+           AAATTCTTTATTCTTTTTTTGTAATAATTTCAGCAAATATAATAATAAGGATGAATTATT
                      ____________________________________________________________
consensus             AAATTCTTTATTCTTTTTTTGTAATAATTTCAGCAAATATAATAATAAGGATGAATTATT
 
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JMFN041P22+           ATTATTATTATTATTATTXXXXXXXXXXXXXXXXXXXXXXXXXXCTCGAGACTAGTTCTC
                      ____________________________________________________________
consensus             ATTATTATTATTATTATTNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGAGACTAGTTCTC