Contig 007546:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN036M05Sequence617007546 (2)ref|XP_004235807.1|4e-52PREDICTED: nudix hydrolase 18, mitochondrial-like isoform X1 [Solanum lycopersi
JMSF006K16Sequence350007546 (2)ref|XP_009605502.1|3e-42PREDICTED: nudix hydrolase 18, mitochondrial-like isoform X1 [Nicotiana tomento297016008

Alignment

This contig is upended


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JMFN036M05+ TCAAGCTCCTCCAGAAC
                      ____________________________________________________________
consensus TCAAGCTCCTCCAGAAC
 
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JMFN036M05+ AATCAAAGGCAGCATGAACCCCTCATGTAATACTCCTAGGCTCTTGCTCTTAAAAAACCA
                      ____________________________________________________________
consensus AATCAAAGGCAGCATGAACCCCTCATGTAATACTCCTAGGCTCTTGCTCTTAAAAAACCA
 
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JMFN036M05+ TTTGCCTAAACAACTCCCAACCTCTCCATATACTCCAGCCTCCTCAAAGGTTTCTCGAAG
                      ____________________________________________________________
consensus TTTGCCTAAACAACTCCCAACCTCTCCATATACTCCAGCCTCCTCAAAGGTTTCTCGAAG
 
. : . : . : . : . : . :
JMFN036M05+ AGCCGCTTCTTCCAAAGATTCATCCTGTTCCCAACCACCCTTAGGAAACATCATCCTTGG
                      ____________________________________________________________
consensus AGCCGCTTCTTCCAAAGATTCATCCTGTTCCCAACCACCCTTAGGAAACATCATCCTTGG
 
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JMFN036M05+ ACTTTTCTGAGAGCTGACCAGAAGGAATTCCAGATCATCAACTAGGGGGGCCCCATGAAT
                      ____________________________________________________________
consensus ACTTTTCTGAGAGCTGACCAGAAGGAATTCCAGATCATCAACTAGGGGGGCCCCATGAAT
 
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JMSF006K16+ TGTATCTGTACGGAATGCAGCCAACAACTTG
JMFN036M05+ AATGGAACCTGCTGATTGCTTGCCTTCCCTGTATCTGTACGGAATGCAGCCAACAACCTG
                      ____________________________________________________________
consensus AATGGAACCTGCTGATTGCTTGCCTTCCCTGTATCTGTACGGAATGCAGCCAACAACTTG
 
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JMSF006K16+ GCGACAACCCTCGACGTTATACCTCTGCAAATCTCTCCCAGTACGAGAAGACATAGA
JMFN036M05+ GCGACAACCTTGAACATTATACCTCTGCAAGTCCCTCCCAGTACGAGAACACATAGAATC
                      ____________________________________________________________
consensus GCGACAACCTTGGACGTTATACCTCTGCAAGTCTCTCCCAGTACGAGAAGACATAGAATC
 
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JMFN036M05+ CACCTTGGTGAGTTTCATCTCTTACTTTTTTACACAAATTAAACCTGAACCCCCTTGCTT
                      ____________________________________________________________
consensus CACCTTGGTGAGTTTCATCTCTTACTTTTTTACACAAATTAAACCTGAACCCCCTTGCTT
 
. : . : . : . : . : . :
JMFN036M05+ CCTCAGAACAAATAATTAAGGTTTATTAACAGACAACAAAAGAAGAAGAAGAAAGACTCA
                      ____________________________________________________________
consensus CCTCAGAACAAATAATTAAGGTTTATTAACAGACAACAAAAGAAGAAGAAGAAAGACTCA
 
. : . : . : . : . : . :
JMFN036M05+ AGGAAATGATCTGAAGAGAAGTTTTGAGGTTTTGGGTGTCTGTCATGAACTGTAGTAGAG
                      ____________________________________________________________
consensus AGGAAATGATCTGAAGAGAAGTTTTGAGGTTTTGGGTGTCTGTCATGAACTGTAGTAGAG
 
. : . : . : . : . : . :
JMFN036M05+ CTAAATTAGGAAAATATGGAAATCTGGTTGAAAGTTTTATGTGATGGATGAACTACAAAT
                      ____________________________________________________________
consensus CTAAATTAGGAAAATATGGAAATCTGGTTGAAAGTTTTATGTGATGGATGAACTACAAAT