| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN034N16 | Sequence | 585 | 007542 (6) | ref|XP_010251892.1| | 70.1 | PREDICTED: uncharacterized protein LOC104593632 [Nelumbo nucifera] | |||||
| JMSF004F09 | Sequence | 474 | 007542 (6) | ref|XP_010251892.1| | 70.1 | PREDICTED: uncharacterized protein LOC104593632 [Nelumbo nucifera] | 469 | 007542 (6) | ref|XP_002272716.1| | 67.0 | PREDICTED: uncharacterized protein LOC100262248 [Vitis vinifera] emb|CBI23071.3| |
| JMSF004F11 | Sequence | 381 | 022018 | ref|XP_006426859.1| | 1e-06 | hypothetical protein CICLE_v10025127mg [Citrus clementina] gb|ESR40099.1| hypoth | 476 | 007542 (6) | ref|XP_010251892.1| | 70.1 | PREDICTED: uncharacterized protein LOC104593632 [Nelumbo nucifera] |
| JMSF036I12 | Sequence | 585 | 007542 (6) | ref|XP_010251892.1| | 70.1 | PREDICTED: uncharacterized protein LOC104593632 [Nelumbo nucifera] | 534 | 007542 (6) | ref|XP_010251892.1| | 70.1 | PREDICTED: uncharacterized protein LOC104593632 [Nelumbo nucifera] |
This contig is upended
. : . : . : . : . : . :
rJMSF036I12- AAATTGGA
JMSF036I12+ TTTTTTTTTTAAATATTAAAAATATTGTAATAAAAAATTGAGTGACCATCAAAATTGGA
JMFN034N16+ ATTAAAAATATTGTAATAAAAAATTGAGTGACCATCAAAATTGGA
____________________________________________________________
consensus TTTTTTTTTTAAATATTAAAAATATTGTAATAAAAAATTGAGTGACCATCAAAATTGGA
. : . : . : . : . : . :
rJMSF036I12- TGGTAAAATTCATCGGAATTTAGCAAAGTAATTCTCAACAGAGCAATAGAGTAATAAATA
JMSF036I12+ TGGTAAAATTCATCGGAATTTAGCAAAGTAATTCTCAACAGAGCAATAGAGTAATAAATA
JMSF004F09+ AAATA
JMFN034N16+ TGGTAAAATTCATCGGAATTTAGCAAAGTAATTCTCAACAGAGCAATAGAGTAATAAATA
____________________________________________________________
consensus TGGTAAAATTCATCGGAATTTAGCAAAGTAATTCTCAACAGAGCAATAGAGTAATAAATA
. : . : . : . : . : . :
rJMSF036I12- AATCTTTAGAAGAGTTAAAGCTCAGGAATCAGGATACCAATAAAGTATGGACTTTAGCCG
JMSF036I12+ AATCTTTAGAAGAGTTAAAGCTCAGGAATCAGGATACCAATAAAGTATGGACTTTAGCCG
JMSF004F09+ AATCTTTAGAAGAGTTAAAGCTCAGGAATCAGGATACCAATAAAGTATGGACTTTAGCCG
rJMSF004F11- AAGAGTTAAAGCTCAGGAATCAGGATACCAATAAAGTATGGACTTTAGCCG
rJMSF004F09- AATCTTTAGAAGAGTTAAAGCTCAGGAATCAGGATACCAATAAAGTATGGACTTTAGCCG
JMFN034N16+ AATCTTTAGAAGAGTTAAAGCTCAGGAATCAGGATACCAATAAAGTATGGACTTTAGCCG
____________________________________________________________
consensus AATCTTTAGAAGAGTTAAAGCTCAGGAATCAGGATACCAATAAAGTATGGACTTTAGCCG
. : . : . : . : . : . :
rJMSF036I12- AAGCAGTGAAGTAAGAATTGAAGTTTTGGCCAAGTAAATCTTCACACACCGTTGCATCAG
JMSF036I12+ AAGCAGTGAAGTAAGAATTGAAGTTTTGGCCAAGTAAATCTTCACACACCGTTGCATCAG
JMSF004F09+ AAGCAGTGAAGTAAGAATTGAAGTTTTGGCCAAGTAAATCTTCACACACCGTTGCATCAG
rJMSF004F11- AAGCAGTGAAGTAAGAATTGAAGTTTTGGCCAAGTAAATCTTCACACACCGTTGCATCAG
rJMSF004F09- AAGCAGTGAAGTAAGAATTGAAGTTTTGGCCAAGTAAATCTTCACACACCGTTGCATCAG
JMFN034N16+ AAGCAGTGAAGTAAGAATTGAAGTTTTGGCCAAGTAAATCTTCACACACCGTTGCATCAG
____________________________________________________________
consensus AAGCAGTGAAGTAAGAATTGAAGTTTTGGCCAAGTAAATCTTCACACACCGTTGCATCAG
. : . : . : . : . : . :
rJMSF036I12- CTTTTTTACTATAGCCAAGATATCTAACCCCTAAAAAGCTCAAGAGAGCAGCAGCACAGA
JMSF036I12+ CTTTTTTACTATAGCCAAGATATCTAACCCCTAAAAAGCTCAAGAGAGCAGCAGCACAGA
JMSF004F09+ CTTTTTTACTATAGCCAAGATATCTAACCCCTAAAAAGCTCAAGAGAGCAGCAGCACAGA
rJMSF004F11- CTTTTTTACTATAGCCAAGATATCTAACCCCTAAAAAGCTCAAGAGAGCAGCAGCACAGA
rJMSF004F09- CTTTTTTACTATAGCCAAGATATCTAACCCCTAAAAAGCTCAAGAGAGCAGCAGCACAGA
JMFN034N16+ CTTTTTTACTATAGCCAAGATATCTAACCCCTAAAAAGCTCAAGAGAGCAGCAGCACAGA
____________________________________________________________
consensus CTTTTTTACTATAGCCAAGATATCTAACCCCTAAAAAGCTCAAGAGAGCAGCAGCACAGA
. : . : . : . : . : . :
rJMSF036I12- AATACAATCATCTATTCAATCAGCTCAATGCTTTGCAGATTCAATCTCCTTCAGTTTTTC
JMSF036I12+ AATACAATCATCTATTCAATCAGCTCAATGCTTTGCAGATTCAATCTCCTTCAGTTTTTC
JMSF004F09+ AATACAATCATCTATTCAATCAGCTCAATGCTTTGCAGATTCAATCTCCTTCAGTTTTTC
rJMSF004F11- AATACAATCATCTATTCAATCAGCTCAATGCTTTGCAGATTCAATCTCCTTCAGTTTTTC
rJMSF004F09- AATACNATCATCTATTCAATCAGCTCAATGCTTTGCAGATTCAATCTCCTTCAGTTTTTC
JMFN034N16+ AATACAATCATCTATTCAATCAGCTCAATGCTTTGCAGATTCAATCTCCTTCAGTTTTTC
____________________________________________________________
consensus AATACAATCATCTATTCAATCAGCTCAATGCTTTGCAGATTCAATCTCCTTCAGTTTTTC
. : . : . : . : . : . :
rJMSF036I12- CAGAGCAGATATGCGATCATCAAGTGATGTTTGGAATCCTTTCACCTCTTGAGCGATGGA
JMSF036I12+ CAGAGCAGATATGCGATCATCAAGTGATGTTTGGAATCCTTTCACCTCTTGAGCGATGGA
JMSF004F09+ CAGAGCAGATATGCGATCATCAAGTGATGTTTGGAATCCTTTCACCTCTTGAGCGATGGA
rJMSF004F11- CAGAGCAGATATGCGATCATCAAGTGATGTTTGGAATCCTTTCACCTCTTGAGCGATGGA
rJMSF004F09- CAGAGCAGATATGCGATCATCAAGTGATGTTTGGAATCCTTTCACCTCTTGAGCGATGGA
JMFN034N16+ CAGAGCAGATATGCGATCATCAAGTGATGTTTGGAATCCTTTCACCTCTTGAGCGATGGA
____________________________________________________________
consensus CAGAGCAGATATGCGATCATCAAGTGATGTTTGGAATCCTTTCACCTCTTGAGCGATGGA
. : . : . : . : . : . :
rJMSF036I12- GTCGTGGCAAACCTTGTAATCCTGATGAAGAAGGTAGATGCCGGCGAACGACGCCGTTGC
JMSF036I12+ GTCGTGGCAAACCTTGTAATCCTGATGAAGAAGGTAGATGCCGGCGAACGACGCCGTTGC
JMSF004F09+ GTCGTGGCAAACCTTGTAATCCTGATGAAGAAGGTAGATGCCGGCGAACGACGCCGTTGC
rJMSF004F11- GTCGTGGCAAACCTTGTAATCCTGATGAAGAAGGTAGATGCCGGCGAACGACGCCGTTGC
rJMSF004F09- GTCGTGGCANACCTTGTAATCCTGATGAAGAAGGTAGATGCCGGCGAACGACGCCGTTGC
JMFN034N16+ GTCGTGGCAAACCTTGTAATCCTGATGAAGAAGGTAGATGCCGGCGAACGACGCCGTTGC
____________________________________________________________
consensus GTCGTGGCAAACCTTGTAATCCTGATGAAGAAGGTAGATGCCGGCGAACGACGCCGTTGC
. : . : . : . : . : . :
rJMSF036I12- AGCGCCGGCGAAGAACGACGTCAAACGTACTTTCGTTACGTATCCAATCATCGCTAGCTC
JMSF036I12+ AGCGCCGGCGAAGAACGACGTCAAACGTACTTTCGTTACGTATCCAATCATCGCTAGCTC
JMSF004F09+ AGCGCCGGCGAAGAACGACGTCAAACGTACTTTCGTTACGTATCCAATCATCGCTAGCTC
rJMSF004F11- AGCGCCGGCGAAGAACGACGTCAAACGTACTTTCGTTACGTATCCAATCATCGCTAGCTC
rJMSF004F09- AGCGCCGGCGAANAACGACGTCNAACGTACTTTCGTTACGTATCCAATCATCGCTAGCTC
JMFN034N16+ AGCGCCGGCGAAGAACGACGTCAAACGTACTTTCGTTACGTATCCAATCATCGCTAGCTC
____________________________________________________________
consensus AGCGCCGGCGAAGAACGACGTCAAACGTACTTTCGTTACGTATCCAATCATCGCTAGCTC
. : . : . : . : . : . :
rJMSF036I12- TCTTCTTTCTTCTTCTTCTTTTTCTTCCCTCTATCCGGAATGCTG
JMSF036I12+ TCTTCTTTCTTCTTCTTCTTTTTCTTCCCTCTATCCGGAATGCTG
JMSF004F09+ TCTTCTTTCTTCTTCTTCTTTTTCTTCCCTCTATCCGGAATGCTGGAT
rJMSF004F11- TCTTCTTTCTTCTTCTTCTTTTTCTTCCCTCTATCCGGAATGCTGGAT
rJMSF004F09- TCTTCTTTCTTCTTCTTCTTTTTCTTCCCTCTATCCGGAATGCTGGAT
JMFN034N16+ TCTTCTTTCTTCTTCTTCTTTTTCTTCCCTCTATCCGGAATGCTGGATTCCGATTTCCGA
____________________________________________________________
consensus TCTTCTTTCTTCTTCTTCTTTTTCTTCCCTCTATCCGGAATGCTGGATTCCGATTTCCGA